RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 TRGV9Q99603 122 aa10.78□□□□□ -0.68
PCDHGA3-201ENST00000253812 TRGV2A0A075B6R0 118 aa10.78□□□□□ -0.68
PCDHGA3-201ENST00000253812 C12orf74Q32Q52 190 aa10.78□□□□□ -0.68
PCDHGA3-201ENST00000253812 FNDC10F2Z333 226 aa10.78□□□□□ -0.68
PCDHGA3-201ENST00000253812 CCL21O00585 134 aa10.78□□□□□ -0.68
PCDHGA3-201ENST00000253812 MPDZO75970 2070 aa10.77□□□□□ -0.68
PCDHGA3-201ENST00000253812 IGKV2-40A0A087WW87 121 aaPredicted RBP10.77□□□□□ -0.68
PCDHGA3-201ENST00000253812 IGKV2D-40P01614 121 aaPredicted RBP10.77□□□□□ -0.68
PCDHGA3-201ENST00000253812 WNT2P09544 360 aa10.77□□□□□ -0.68
PCDHGA3-201ENST00000253812 FAM208BQ5VWN6 2430 aa10.77□□□□□ -0.69
PCDHGA3-201ENST00000253812 C15orf62A8K5M9 175 aa10.77□□□□□ -0.69
PCDHGA3-201ENST00000253812 DPH3Q96FX2 82 aa10.77□□□□□ -0.69
PCDHGA3-201ENST00000253812 PRADC1Q9BSG0 188 aa10.77□□□□□ -0.69
PCDHGA3-201ENST00000253812 NPYP01303 97 aa10.77□□□□□ -0.69
PCDHGA3-201ENST00000253812 FLVCR1-AS1Q8TAF5 88 aa10.77□□□□□ -0.69
PCDHGA3-201ENST00000253812 MTCL1Q9Y4B5 1905 aaKnown RBP10.77□□□□□ -0.69
PCDHGA3-201ENST00000253812 NBR2O15453 112 aa10.77□□□□□ -0.69
PCDHGA3-201ENST00000253812 FAM104BQ5XKR9 115 aa10.77□□□□□ -0.69
PCDHGA3-201ENST00000253812 PNRC2Q9NPJ4 139 aaKnown RBP10.77□□□□□ -0.69
PCDHGA3-201ENST00000253812 ACYP1P07311 99 aa10.76□□□□□ -0.69
PCDHGA3-201ENST00000253812 CSRP2Q16527 193 aa10.76□□□□□ -0.69
PCDHGA3-201ENST00000253812 FAM231DQ6ZW35 169 aa10.76□□□□□ -0.69
PCDHGA3-201ENST00000253812 GLMPQ8WWB7 406 aa10.76□□□□□ -0.69
PCDHGA3-201ENST00000253812 CARD19Q96LW7 228 aa10.76□□□□□ -0.69
PCDHGA3-201ENST00000253812 CACNA1AO00555 2505 aa10.76□□□□□ -0.69
PCDHGA3-201ENST00000253812 K7ERJ3 54 aa10.76□□□□□ -0.69
PCDHGA3-201ENST00000253812 SH2D6Q7Z4S9 175 aa10.76□□□□□ -0.69
PCDHGA3-201ENST00000253812 DOCK4Q8N1I0 1966 aa10.76□□□□□ -0.69
PCDHGA3-201ENST00000253812 VDAC2P45880 294 aaPredicted RBP10.76□□□□□ -0.69
PCDHGA3-201ENST00000253812 Q86TA4 180 aa10.76□□□□□ -0.69
PCDHGA3-201ENST00000253812 SPACA3Q8IXA5 215 aa10.76□□□□□ -0.69
PCDHGA3-201ENST00000253812 ZNF837Q96EG3 531 aaPredicted RBP10.76□□□□□ -0.69
PCDHGA3-201ENST00000253812 C8orf86Q6ZUL3 223 aa10.76□□□□□ -0.69
PCDHGA3-201ENST00000253812 SPXQ9BT56 116 aa10.76□□□□□ -0.69
PCDHGA3-201ENST00000253812 V9GYV3 84 aa10.76□□□□□ -0.69
PCDHGA3-201ENST00000253812 HAMPP81172 84 aa10.75□□□□□ -0.69
PCDHGA3-201ENST00000253812 QRFPP83859 136 aa10.75□□□□□ -0.69
PCDHGA3-201ENST00000253812 VWC2Q2TAL6 325 aa10.75□□□□□ -0.69
PCDHGA3-201ENST00000253812 UNQ6494/PRO21346Q6UXR6 183 aa10.75□□□□□ -0.69
PCDHGA3-201ENST00000253812 LINC00479Q96M42 142 aa10.75□□□□□ -0.69
PCDHGA3-201ENST00000253812 ANKRD36A6QL64 1941 aa10.75□□□□□ -0.69
PCDHGA3-201ENST00000253812 ZSWIM8A7E2V4 1837 aa10.75□□□□□ -0.69
PCDHGA3-201ENST00000253812 ZNF329Q86UD4 541 aa10.75□□□□□ -0.69
PCDHGA3-201ENST00000253812 PTPRQQ9UMZ3 2332 aa10.75□□□□□ -0.69
PCDHGA3-201ENST00000253812 CECR9P0C854 216 aa10.75□□□□□ -0.69
PCDHGA3-201ENST00000253812 ZNF883P0CG24 379 aa10.75□□□□□ -0.69
PCDHGA3-201ENST00000253812 RALGAPA1Q6GYQ0 2036 aa10.75□□□□□ -0.69
PCDHGA3-201ENST00000253812 SIP14410 1827 aa10.75□□□□□ -0.69
PCDHGA3-201ENST00000253812 RFPL3SP0C7P2 107 aa10.74□□□□□ -0.69
PCDHGA3-201ENST00000253812 Q6ZS49 121 aa10.74□□□□□ -0.69
PCDHGA3-201ENST00000253812 PI4KAP42356 2102 aa10.74□□□□□ -0.69
PCDHGA3-201ENST00000253812 TMEM167AQ8TBQ9 72 aa10.74□□□□□ -0.69
PCDHGA3-201ENST00000253812 MYOD1P15172 320 aa10.74□□□□□ -0.69
PCDHGA3-201ENST00000253812 FAM201AQ5SY85 155 aa10.74□□□□□ -0.69
PCDHGA3-201ENST00000253812 SIGLEC8Q9NYZ4 499 aa10.74□□□□□ -0.69
PCDHGA3-201ENST00000253812 PRSS29PA6NIE9 313 aa10.74□□□□□ -0.69
PCDHGA3-201ENST00000253812 C9orf172C9J069 976 aa10.74□□□□□ -0.69
PCDHGA3-201ENST00000253812 C2orf66Q6UXQ4 117 aa10.74□□□□□ -0.69
PCDHGA3-201ENST00000253812 Q8N8P6 123 aa10.74□□□□□ -0.69
PCDHGA3-201ENST00000253812 CHCHD2Q9Y6H1 151 aaPredicted RBP10.74□□□□□ -0.69
PCDHGA3-201ENST00000253812 CFHR2P36980 270 aa10.73□□□□□ -0.69
PCDHGA3-201ENST00000253812 LY6EQ16553 131 aa10.73□□□□□ -0.69
PCDHGA3-201ENST00000253812 Q6ZRM9 215 aa10.73□□□□□ -0.69
PCDHGA3-201ENST00000253812 C14orf178Q8N769 122 aaPredicted RBP10.73□□□□□ -0.69
PCDHGA3-201ENST00000253812 ITLN2Q8WWU7 325 aaPredicted RBP10.73□□□□□ -0.69
PCDHGA3-201ENST00000253812 ANAPC10Q9UM13 185 aa10.73□□□□□ -0.69
PCDHGA3-201ENST00000253812 NOTCH3Q9UM47 2321 aa10.73□□□□□ -0.69
PCDHGA3-201ENST00000253812 TRBV6-6A0A0A6YYG2 114 aa10.73□□□□□ -0.69
PCDHGA3-201ENST00000253812 A0A0G2JRQ6 117 aa10.73□□□□□ -0.69
PCDHGA3-201ENST00000253812 KLRD1Q13241 179 aa10.73□□□□□ -0.69
PCDHGA3-201ENST00000253812 HAPLN4Q86UW8 402 aa10.73□□□□□ -0.69
PCDHGA3-201ENST00000253812 C1orf162Q8NEQ5 155 aaPredicted RBP10.73□□□□□ -0.69
PCDHGA3-201ENST00000253812 CHCHD5Q9BSY4 110 aa10.73□□□□□ -0.69
PCDHGA3-201ENST00000253812 MRPS18CQ9Y3D5 142 aaKnown RBP10.73□□□□□ -0.69
PCDHGA3-201ENST00000253812 F8VRH5 84 aa10.73□□□□□ -0.69
PCDHGA3-201ENST00000253812 IGLC1P0CG04 106 aa10.73□□□□□ -0.69
PCDHGA3-201ENST00000253812 CFPP27918 469 aa10.73□□□□□ -0.69
PCDHGA3-201ENST00000253812 ZNF474Q6S9Z5 364 aaPredicted RBP10.73□□□□□ -0.69
PCDHGA3-201ENST00000253812 LRRK1Q38SD2 2015 aa10.73□□□□□ -0.69
PCDHGA3-201ENST00000253812 CFHR1Q03591 330 aa10.73□□□□□ -0.69
PCDHGA3-201ENST00000253812 FDCSPQ8NFU4 85 aa10.73□□□□□ -0.69
PCDHGA3-201ENST00000253812 PCNX1Q96RV3 2341 aa10.73□□□□□ -0.69
PCDHGA3-201ENST00000253812 WDR81Q562E7 1941 aa10.72□□□□□ -0.69
PCDHGA3-201ENST00000253812 SMIM27A0A1W2PRY6 76 aa10.72□□□□□ -0.69
PCDHGA3-201ENST00000253812 ATOX1O00244 68 aa10.72□□□□□ -0.69
PCDHGA3-201ENST00000253812 CCL3L1P16619 93 aa10.72□□□□□ -0.69
PCDHGA3-201ENST00000253812 ZFHX2Q9C0A1 2572 aaPredicted RBP10.72□□□□□ -0.69
PCDHGA3-201ENST00000253812 ACACBO00763 2458 aa10.72□□□□□ -0.69
PCDHGA3-201ENST00000253812 B9A039 149 aa10.72□□□□□ -0.69
PCDHGA3-201ENST00000253812 HERV-K104P63124 156 aa10.72□□□□□ -0.69
PCDHGA3-201ENST00000253812 ARTNQ5T4W7 220 aa10.72□□□□□ -0.69
PCDHGA3-201ENST00000253812 PYGO2Q9BRQ0 406 aa10.72□□□□□ -0.69
PCDHGA3-201ENST00000253812 FREM3P0C091 2139 aa10.72□□□□□ -0.69
PCDHGA3-201ENST00000253812 SRD5A1P18405 259 aa10.72□□□□□ -0.69
PCDHGA3-201ENST00000253812 CRYGSP22914 178 aa10.72□□□□□ -0.69
PCDHGA3-201ENST00000253812 C6orf226Q5I0X4 101 aa10.72□□□□□ -0.69
PCDHGA3-201ENST00000253812 MRPL14Q6P1L8 145 aaKnown RBP10.72□□□□□ -0.69
PCDHGA3-201ENST00000253812 FOXI2Q6ZQN5 318 aa10.72□□□□□ -0.69
PCDHGA3-201ENST00000253812 TMEM141Q96I45 108 aa10.72□□□□□ -0.69
PCDHGA3-201ENST00000253812 CYYR1Q96J86 154 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms