RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 EWSR1Q01844 656 aaKnown RBP eCLIP12.66□□□□□ -0.38
PHGDH-227ENST00000641811 GDF5OSQ5U4N7 250 aa12.66□□□□□ -0.38
PHGDH-227ENST00000641811 MIC13Q5XKP0 118 aa12.66□□□□□ -0.38
PHGDH-227ENST00000641811 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.66□□□□□ -0.38
PHGDH-227ENST00000641811 RNF126Q9BV68 326 aa12.66□□□□□ -0.38
PHGDH-227ENST00000641811 ARV1Q9H2C2 271 aa12.66□□□□□ -0.38
PHGDH-227ENST00000641811 H3BMM0 161 aa12.65□□□□□ -0.38
PHGDH-227ENST00000641811 ISLRO14498 428 aa12.65□□□□□ -0.38
PHGDH-227ENST00000641811 S100A7P31151 101 aa12.65□□□□□ -0.38
PHGDH-227ENST00000641811 BAXQ07812 192 aa12.65□□□□□ -0.38
PHGDH-227ENST00000641811 RAB31Q13636 194 aa12.65□□□□□ -0.38
PHGDH-227ENST00000641811 IGFL4Q6B9Z1 124 aa12.65□□□□□ -0.38
PHGDH-227ENST00000641811 C16orf92Q96LL3 132 aa12.65□□□□□ -0.38
PHGDH-227ENST00000641811 C20orf173Q96LM9 149 aa12.65□□□□□ -0.38
PHGDH-227ENST00000641811 GPR82Q96P67 336 aa12.65□□□□□ -0.38
PHGDH-227ENST00000641811 COX7A2P2O60397 106 aa12.64□□□□□ -0.39
PHGDH-227ENST00000641811 MPC2O95563 127 aa12.64□□□□□ -0.39
PHGDH-227ENST00000641811 SPP1P10451 314 aa12.64□□□□□ -0.39
PHGDH-227ENST00000641811 FGF7P21781 194 aa12.64□□□□□ -0.39
PHGDH-227ENST00000641811 MEOX2P50222 304 aa12.64□□□□□ -0.39
PHGDH-227ENST00000641811 FGL1Q08830 312 aa12.64□□□□□ -0.39
PHGDH-227ENST00000641811 ATP6V1FQ16864 119 aa12.64□□□□□ -0.39
PHGDH-227ENST00000641811 PXDC1Q5TGL8 231 aa12.64□□□□□ -0.39
PHGDH-227ENST00000641811 MORN5Q5VZ52 161 aa12.64□□□□□ -0.39
PHGDH-227ENST00000641811 GATAD1Q8WUU5 269 aa12.64□□□□□ -0.39
PHGDH-227ENST00000641811 TMEM37Q8WXS4 190 aa12.64□□□□□ -0.39
PHGDH-227ENST00000641811 RARRES2Q99969 163 aa12.64□□□□□ -0.39
PHGDH-227ENST00000641811 SLC25A31Q9H0C2 315 aa12.64□□□□□ -0.39
PHGDH-227ENST00000641811 CLEC5AQ9NY25 188 aa12.64□□□□□ -0.39
PHGDH-227ENST00000641811 F6UB75 175 aa12.63□□□□□ -0.39
PHGDH-227ENST00000641811 IGKV3-20P01619 116 aa12.63□□□□□ -0.39
PHGDH-227ENST00000641811 HLA-DRB4P13762 266 aa12.63□□□□□ -0.39
PHGDH-227ENST00000641811 ATF4P18848 351 aaPredicted RBP12.63□□□□□ -0.39
PHGDH-227ENST00000641811 CXCL3P19876 107 aa12.63□□□□□ -0.39
PHGDH-227ENST00000641811 PRR20EP86478 221 aa12.63□□□□□ -0.39
PHGDH-227ENST00000641811 PRR20CP86479 221 aa12.63□□□□□ -0.39
PHGDH-227ENST00000641811 PRR20DP86480 221 aa12.63□□□□□ -0.39
PHGDH-227ENST00000641811 PRR20BP86481 221 aa12.63□□□□□ -0.39
PHGDH-227ENST00000641811 PRR20AP86496 221 aa12.63□□□□□ -0.39
PHGDH-227ENST00000641811 MORN3Q6PF18 240 aaPredicted RBP12.63□□□□□ -0.39
PHGDH-227ENST00000641811 LINC00305Q7Z4B0 112 aa12.63□□□□□ -0.39
PHGDH-227ENST00000641811 OR5C1Q8NGR4 320 aa12.63□□□□□ -0.39
PHGDH-227ENST00000641811 OR11H2Q8NH07 326 aa12.63□□□□□ -0.39
PHGDH-227ENST00000641811 HLA-DRB4X5D2U9 266 aa12.63□□□□□ -0.39
PHGDH-227ENST00000641811 TRAV8-2A0A0B4J237 113 aa12.62□□□□□ -0.39
PHGDH-227ENST00000641811 SNRPCP09234 159 aaKnown RBP12.62□□□□□ -0.39
PHGDH-227ENST00000641811 RPL7P18124 248 aaKnown RBP12.62□□□□□ -0.39
PHGDH-227ENST00000641811 CLINT1Q14677 625 aa12.62□□□□□ -0.39
PHGDH-227ENST00000641811 OPCMLQ14982 345 aa12.62□□□□□ -0.39
PHGDH-227ENST00000641811 C10orf113Q5VZT2 155 aa12.62□□□□□ -0.39
PHGDH-227ENST00000641811 RNF182Q8N6D2 247 aa12.62□□□□□ -0.39
PHGDH-227ENST00000641811 THAP6Q8TBB0 222 aa12.62□□□□□ -0.39
PHGDH-227ENST00000641811 SAV1Q9H4B6 383 aaPredicted RBP12.62□□□□□ -0.39
PHGDH-227ENST00000641811 MRPS12O15235 138 aaKnown RBP12.61□□□□□ -0.39
PHGDH-227ENST00000641811 RPL29P47914 159 aaKnown RBP12.61□□□□□ -0.39
PHGDH-227ENST00000641811 FOXI2Q6ZQN5 318 aa12.61□□□□□ -0.39
PHGDH-227ENST00000641811 Q6ZRG5 221 aa12.61□□□□□ -0.39
PHGDH-227ENST00000641811 S100A7AQ86SG5 101 aa12.61□□□□□ -0.39
PHGDH-227ENST00000641811 DNAJC4Q9NNZ3 241 aa12.61□□□□□ -0.39
PHGDH-227ENST00000641811 RPRMQ9NS64 109 aa12.61□□□□□ -0.39
PHGDH-227ENST00000641811 SLC39A9Q9NUM3 307 aa12.61□□□□□ -0.39
PHGDH-227ENST00000641811 MBD2Q9UBB5 411 aa12.61□□□□□ -0.39
PHGDH-227ENST00000641811 CSMD3Q7Z407 3707 aa12.61□□□□□ -0.39
PHGDH-227ENST00000641811 TENM2Q9NT68 2774 aa12.61□□□□□ -0.39
PHGDH-227ENST00000641811 ELOA3CA0A087WX78 387 aaPredicted RBP12.6□□□□□ -0.39
PHGDH-227ENST00000641811 TRAV5A0A0B4J249 113 aa12.6□□□□□ -0.39
PHGDH-227ENST00000641811 DEFB4AO15263 64 aa12.6□□□□□ -0.39
PHGDH-227ENST00000641811 HLA-DMBP28068 263 aa12.6□□□□□ -0.39
PHGDH-227ENST00000641811 FXYD7P58549 80 aa12.6□□□□□ -0.39
PHGDH-227ENST00000641811 B2MP61769 119 aa12.6□□□□□ -0.39
PHGDH-227ENST00000641811 FCN2Q15485 313 aa12.6□□□□□ -0.39
PHGDH-227ENST00000641811 SAMD13Q5VXD3 122 aa12.6□□□□□ -0.39
PHGDH-227ENST00000641811 OR4B1Q8NGF8 309 aa12.6□□□□□ -0.39
PHGDH-227ENST00000641811 IL17DQ8TAD2 202 aa12.6□□□□□ -0.39
PHGDH-227ENST00000641811 CHAC2Q8WUX2 184 aa12.6□□□□□ -0.39
PHGDH-227ENST00000641811 XCL2Q9UBD3 114 aa12.6□□□□□ -0.39
PHGDH-227ENST00000641811 PXMP4Q9Y6I8 212 aa12.6□□□□□ -0.39
PHGDH-227ENST00000641811 KMT2CQ8NEZ4 4911 aaKnown RBP12.6□□□□□ -0.39
PHGDH-227ENST00000641811 A0A087X0K7 114 aa12.59□□□□□ -0.39
PHGDH-227ENST00000641811 A0A0J9YX75 114 aa12.59□□□□□ -0.39
PHGDH-227ENST00000641811 PET100P0DJ07 73 aa12.59□□□□□ -0.39
PHGDH-227ENST00000641811 PRB4P10163 310 aaPredicted RBP12.59□□□□□ -0.39
PHGDH-227ENST00000641811 TMEM41BQ5BJD5 291 aa12.59□□□□□ -0.39
PHGDH-227ENST00000641811 FAM78BQ5VT40 261 aa12.59□□□□□ -0.39
PHGDH-227ENST00000641811 EBLN2Q6P2I7 272 aa12.59□□□□□ -0.39
PHGDH-227ENST00000641811 CSNK1G2-AS1Q8NCQ2 148 aa12.59□□□□□ -0.39
PHGDH-227ENST00000641811 OR11H7Q8NGC8 314 aa12.59□□□□□ -0.39
PHGDH-227ENST00000641811 NPCDR1Q9BY65 106 aa12.59□□□□□ -0.39
PHGDH-227ENST00000641811 MED28Q9H204 178 aa12.59□□□□□ -0.39
PHGDH-227ENST00000641811 H3BTX0 84 aa12.58□□□□□ -0.4
PHGDH-227ENST00000641811 MPDU1O75352 247 aa12.58□□□□□ -0.4
PHGDH-227ENST00000641811 ZNF705DP0CH99 300 aaPredicted RBP12.58□□□□□ -0.4
PHGDH-227ENST00000641811 ZNF705BP0CI00 300 aaPredicted RBP12.58□□□□□ -0.4
PHGDH-227ENST00000641811 RPL12P30050 165 aaKnown RBP12.58□□□□□ -0.4
PHGDH-227ENST00000641811 NUTF2P61970 127 aaKnown RBP12.58□□□□□ -0.4
PHGDH-227ENST00000641811 GCSAMLQ5JQS6 135 aa12.58□□□□□ -0.4
PHGDH-227ENST00000641811 OR1L4Q8NGR5 311 aa12.58□□□□□ -0.4
PHGDH-227ENST00000641811 SLC35B3Q9H1N7 401 aa12.58□□□□□ -0.4
PHGDH-227ENST00000641811 HSPB11Q9Y547 144 aa12.58□□□□□ -0.4
PHGDH-227ENST00000641811 PMS2P11Q13670 270 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms