RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 OR4F5Q8NH21 305 aa10.11□□□□□ -0.79
PHGDH-221ENST00000641573 SUN5Q8TC36 379 aa10.11□□□□□ -0.79
PHGDH-221ENST00000641573 OR4F4Q96R69 305 aa10.11□□□□□ -0.79
PHGDH-221ENST00000641573 CARHSP1Q9Y2V2 147 aaKnown RBP10.11□□□□□ -0.79
PHGDH-221ENST00000641573 YTHDF2Q9Y5A9 579 aaKnown RBP10.11□□□□□ -0.79
PHGDH-221ENST00000641573 FAM74A7A6NL05 159 aa10.1□□□□□ -0.79
PHGDH-221ENST00000641573 C11orf94C9JXX5 98 aa10.1□□□□□ -0.79
PHGDH-221ENST00000641573 TRBV12-3P01733 135 aa10.1□□□□□ -0.79
PHGDH-221ENST00000641573 ATP5G3P48201 142 aa10.1□□□□□ -0.79
PHGDH-221ENST00000641573 CEBPGP53567 150 aa10.1□□□□□ -0.79
PHGDH-221ENST00000641573 KIAA0141Q14154 515 aaPredicted RBP10.1□□□□□ -0.79
PHGDH-221ENST00000641573 SOHLH1Q5JUK2 328 aa10.1□□□□□ -0.79
PHGDH-221ENST00000641573 FXYD5Q96DB9 178 aa10.1□□□□□ -0.79
PHGDH-221ENST00000641573 ZFAND3Q9H8U3 227 aa10.1□□□□□ -0.79
PHGDH-221ENST00000641573 RABAC1Q9UI14 185 aa10.1□□□□□ -0.79
PHGDH-221ENST00000641573 TRRAPQ9Y4A5 3859 aa10.09□□□□□ -0.79
PHGDH-221ENST00000641573 BMPR1BO00238 502 aa10.09□□□□□ -0.79
PHGDH-221ENST00000641573 NDUFS6O75380 124 aaKnown RBP10.09□□□□□ -0.79
PHGDH-221ENST00000641573 RPLP1P05386 114 aaKnown RBP10.09□□□□□ -0.79
PHGDH-221ENST00000641573 CRYBA1P05813 215 aa10.09□□□□□ -0.79
PHGDH-221ENST00000641573 GP9P14770 177 aa10.09□□□□□ -0.79
PHGDH-221ENST00000641573 GUCA2BQ16661 112 aa10.09□□□□□ -0.79
PHGDH-221ENST00000641573 TXNDC17Q9BRA2 123 aa10.09□□□□□ -0.79
PHGDH-221ENST00000641573 TMEM14CQ9P0S9 112 aa10.09□□□□□ -0.79
PHGDH-221ENST00000641573 ARL2-SNX15V9GYD0 113 aa10.09□□□□□ -0.79
PHGDH-221ENST00000641573 NBEAL2Q6ZNJ1 2754 aa10.08□□□□□ -0.8
PHGDH-221ENST00000641573 IGHV3OR16-8A0A075B7F1 116 aa10.08□□□□□ -0.8
PHGDH-221ENST00000641573 ZNF98A6NK75 572 aa10.08□□□□□ -0.8
PHGDH-221ENST00000641573 F6UZH7 168 aa10.08□□□□□ -0.8
PHGDH-221ENST00000641573 S100A7P31151 101 aa10.08□□□□□ -0.8
PHGDH-221ENST00000641573 RPL15P61313 204 aaKnown RBP10.08□□□□□ -0.8
PHGDH-221ENST00000641573 FAM209BQ5JX69 171 aa10.08□□□□□ -0.8
PHGDH-221ENST00000641573 FAM90A2PQ658T7 463 aa10.08□□□□□ -0.8
PHGDH-221ENST00000641573 RNF152Q8N8N0 203 aa10.08□□□□□ -0.8
PHGDH-221ENST00000641573 MYOZ3Q8TDC0 251 aa10.08□□□□□ -0.8
PHGDH-221ENST00000641573 OR5B12Q96R08 314 aa10.08□□□□□ -0.8
PHGDH-221ENST00000641573 PEF1Q9UBV8 284 aaKnown RBP10.08□□□□□ -0.8
PHGDH-221ENST00000641573 A0A1W2PRE2 83 aa10.07□□□□□ -0.8
PHGDH-221ENST00000641573 TMEM250H0YL14 139 aa10.07□□□□□ -0.8
PHGDH-221ENST00000641573 PDE6DO43924 150 aa10.07□□□□□ -0.8
PHGDH-221ENST00000641573 GGCTO75223 188 aaKnown RBP10.07□□□□□ -0.8
PHGDH-221ENST00000641573 SNRPCP09234 159 aaKnown RBP10.07□□□□□ -0.8
PHGDH-221ENST00000641573 BPIFA4PQ86YQ2 179 aa10.07□□□□□ -0.8
PHGDH-221ENST00000641573 SVBPQ8N300 66 aa10.07□□□□□ -0.8
PHGDH-221ENST00000641573 CLPSL1A2RUU4 121 aa10.06□□□□□ -0.8
PHGDH-221ENST00000641573 NDUFA4O00483 81 aa10.06□□□□□ -0.8
PHGDH-221ENST00000641573 NBEAP1P0C6P0 100 aa10.06□□□□□ -0.8
PHGDH-221ENST00000641573 HIST1H1EP10412 219 aaKnown RBP10.06□□□□□ -0.8
PHGDH-221ENST00000641573 CCDC28AQ8IWP9 274 aa10.06□□□□□ -0.8
PHGDH-221ENST00000641573 KLHDC1Q8N7A1 406 aa10.06□□□□□ -0.8
PHGDH-221ENST00000641573 BLNKQ8WV28 456 aa10.06□□□□□ -0.8
PHGDH-221ENST00000641573 METTL26Q96S19 204 aa10.06□□□□□ -0.8
PHGDH-221ENST00000641573 C20orf24Q9BUV8 137 aa10.06□□□□□ -0.8
PHGDH-221ENST00000641573 RNF24Q9Y225 148 aa10.06□□□□□ -0.8
PHGDH-221ENST00000641573 GGTLC3B5MD39 225 aa10.05□□□□□ -0.8
PHGDH-221ENST00000641573 H3BQ15 152 aa10.05□□□□□ -0.8
PHGDH-221ENST00000641573 H3BTX0 84 aa10.05□□□□□ -0.8
PHGDH-221ENST00000641573 MRPS12O15235 138 aaKnown RBP10.05□□□□□ -0.8
PHGDH-221ENST00000641573 LGALS1P09382 135 aaKnown RBP10.05□□□□□ -0.8
PHGDH-221ENST00000641573 NPPCP23582 126 aa10.05□□□□□ -0.8
PHGDH-221ENST00000641573 ATRAIDQ6UW56 229 aa10.05□□□□□ -0.8
PHGDH-221ENST00000641573 OR4F17Q8NGA8 305 aa10.05□□□□□ -0.8
PHGDH-221ENST00000641573 RPUSD4Q96CM3 377 aaKnown RBP10.05□□□□□ -0.8
PHGDH-221ENST00000641573 UBE2E2Q96LR5 201 aa10.05□□□□□ -0.8
PHGDH-221ENST00000641573 C16orf95Q9H693 158 aa10.05□□□□□ -0.8
PHGDH-221ENST00000641573 ZNF586Q9NXT0 402 aa10.05□□□□□ -0.8
PHGDH-221ENST00000641573 SCO2A0A1W2PP80 73 aa10.04□□□□□ -0.8
PHGDH-221ENST00000641573 ZNF727A8MUV8 499 aa10.04□□□□□ -0.8
PHGDH-221ENST00000641573 ZNF207O43670 478 aaKnown RBP10.04□□□□□ -0.8
PHGDH-221ENST00000641573 SCO1O75880 301 aa10.04□□□□□ -0.8
PHGDH-221ENST00000641573 SNAPINO95295 136 aa10.04□□□□□ -0.8
PHGDH-221ENST00000641573 IGLC2P0DOY2 106 aa10.04□□□□□ -0.8
PHGDH-221ENST00000641573 RPL7P18124 248 aaKnown RBP10.04□□□□□ -0.8
PHGDH-221ENST00000641573 RANP62826 216 aaKnown RBP10.04□□□□□ -0.8
PHGDH-221ENST00000641573 SUMO1P63165 101 aaKnown RBP10.04□□□□□ -0.8
PHGDH-221ENST00000641573 ZNF674Q2M3X9 581 aa10.04□□□□□ -0.8
PHGDH-221ENST00000641573 UNQ9165/PRO28630Q6UXU0 137 aa10.04□□□□□ -0.8
PHGDH-221ENST00000641573 NKX6-2Q9C056 277 aaPredicted RBP10.04□□□□□ -0.8
PHGDH-221ENST00000641573 PARLQ9H300 379 aa10.04□□□□□ -0.8
PHGDH-221ENST00000641573 U3KQE9 123 aa10.04□□□□□ -0.8
PHGDH-221ENST00000641573 BUB3O43684 328 aa10.03□□□□□ -0.8
PHGDH-221ENST00000641573 NDUFB4O95168 129 aa10.03□□□□□ -0.8
PHGDH-221ENST00000641573 CRYBB3P26998 211 aa10.03□□□□□ -0.8
PHGDH-221ENST00000641573 MYCNOSP40205 109 aa10.03□□□□□ -0.8
PHGDH-221ENST00000641573 FAM74A3Q4VXF1 159 aa10.03□□□□□ -0.8
PHGDH-221ENST00000641573 OR8I2Q8N0Y5 310 aa10.03□□□□□ -0.8
PHGDH-221ENST00000641573 CLRN3Q8NCR9 226 aa10.03□□□□□ -0.8
PHGDH-221ENST00000641573 TMEM190Q8WZ59 177 aa10.03□□□□□ -0.8
PHGDH-221ENST00000641573 C11orf52Q96A22 123 aa10.03□□□□□ -0.8
PHGDH-221ENST00000641573 TVP23CQ96ET8 276 aa10.03□□□□□ -0.8
PHGDH-221ENST00000641573 SMIM7Q9BQ49 75 aa10.03□□□□□ -0.8
PHGDH-221ENST00000641573 NIPSNAP3BQ9BS92 247 aa10.03□□□□□ -0.8
PHGDH-221ENST00000641573 ELOVL1Q9BW60 279 aa10.03□□□□□ -0.8
PHGDH-221ENST00000641573 TRBV19A0A075B6N1 114 aa10.02□□□□□ -0.81
PHGDH-221ENST00000641573 IGHV3-49A0A0A0MS15 119 aa10.02□□□□□ -0.81
PHGDH-221ENST00000641573 IGHV3-66A0A0C4DH42 116 aa10.02□□□□□ -0.81
PHGDH-221ENST00000641573 ZNF320A2RRD8 509 aa10.02□□□□□ -0.81
PHGDH-221ENST00000641573 PGPA6NDG6 321 aa10.02□□□□□ -0.81
PHGDH-221ENST00000641573 M0R036 132 aa10.02□□□□□ -0.81
PHGDH-221ENST00000641573 NDUFA7O95182 113 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms