RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 ZFAND3Q9H8U3 227 aa7.82□□□□□ -1.16
FOXCUT-201ENST00000628509 RFNGQ9Y644 331 aa7.82□□□□□ -1.16
FOXCUT-201ENST00000628509 TLN2Q9Y4G6 2542 aa7.81□□□□□ -1.16
FOXCUT-201ENST00000628509 LOC102723971A0A1B0GUV8 181 aa7.81□□□□□ -1.16
FOXCUT-201ENST00000628509 SERTM2A0A1B0GWG4 89 aa7.81□□□□□ -1.16
FOXCUT-201ENST00000628509 FBLL1A6NHQ2 334 aaKnown RBP7.81□□□□□ -1.16
FOXCUT-201ENST00000628509 ZNF785A8K8V0 405 aa7.81□□□□□ -1.16
FOXCUT-201ENST00000628509 A8MWP6 167 aa7.81□□□□□ -1.16
FOXCUT-201ENST00000628509 C11orf94C9JXX5 98 aa7.81□□□□□ -1.16
FOXCUT-201ENST00000628509 S100A9P06702 114 aaKnown RBP7.81□□□□□ -1.16
FOXCUT-201ENST00000628509 PROK1P58294 105 aa7.81□□□□□ -1.16
FOXCUT-201ENST00000628509 PAFAH1B2P68402 229 aa7.81□□□□□ -1.16
FOXCUT-201ENST00000628509 KIAA0141Q14154 515 aaPredicted RBP7.81□□□□□ -1.16
FOXCUT-201ENST00000628509 OR11H1Q8NG94 326 aa7.81□□□□□ -1.16
FOXCUT-201ENST00000628509 OR5B12Q96R08 314 aa7.81□□□□□ -1.16
FOXCUT-201ENST00000628509 PRELID1Q9Y255 219 aa7.81□□□□□ -1.16
FOXCUT-201ENST00000628509 ASH1LQ9NR48 2969 aaKnown RBP7.81□□□□□ -1.16
FOXCUT-201ENST00000628509 ACANP16112 2415 aa7.81□□□□□ -1.16
FOXCUT-201ENST00000628509 CSMD2Q7Z408 3487 aa7.8□□□□□ -1.16
FOXCUT-201ENST00000628509 IGHV3-35A0A0C4DH35 117 aa7.8□□□□□ -1.16
FOXCUT-201ENST00000628509 IGHV7-4-1A0A0J9YVY3 117 aa7.8□□□□□ -1.16
FOXCUT-201ENST00000628509 BUB3O43684 328 aa7.8□□□□□ -1.16
FOXCUT-201ENST00000628509 PAGE4O60829 102 aa7.8□□□□□ -1.16
FOXCUT-201ENST00000628509 HOXD3P31249 432 aaPredicted RBP7.8□□□□□ -1.16
FOXCUT-201ENST00000628509 MYCNOSP40205 109 aa7.8□□□□□ -1.16
FOXCUT-201ENST00000628509 SOHLH1Q5JUK2 328 aa7.8□□□□□ -1.16
FOXCUT-201ENST00000628509 SIGLEC15Q6ZMC9 328 aa7.8□□□□□ -1.16
FOXCUT-201ENST00000628509 LCNL1Q6ZST4 164 aa7.8□□□□□ -1.16
FOXCUT-201ENST00000628509 WIPF2Q8TF74 440 aaPredicted RBP7.8□□□□□ -1.16
FOXCUT-201ENST00000628509 HIST1H2BAQ96A08 127 aa7.8□□□□□ -1.16
FOXCUT-201ENST00000628509 FAM167A-AS1Q96KT0 104 aa7.8□□□□□ -1.16
FOXCUT-201ENST00000628509 SCRT1Q9BWW7 348 aa7.8□□□□□ -1.16
FOXCUT-201ENST00000628509 SONP18583 2426 aaKnown RBP7.8□□□□□ -1.16
FOXCUT-201ENST00000628509 A0A087X0K7 114 aa7.79□□□□□ -1.16
FOXCUT-201ENST00000628509 F8W036 122 aa7.79□□□□□ -1.16
FOXCUT-201ENST00000628509 CCL24O00175 119 aa7.79□□□□□ -1.16
FOXCUT-201ENST00000628509 OR10J4P0C629 311 aa7.79□□□□□ -1.16
FOXCUT-201ENST00000628509 GP9P14770 177 aa7.79□□□□□ -1.16
FOXCUT-201ENST00000628509 ID1P41134 155 aa7.79□□□□□ -1.16
FOXCUT-201ENST00000628509 SPATA31B1PQ5VZV4 182 aa7.79□□□□□ -1.16
FOXCUT-201ENST00000628509 SLC7A5P1Q8MH63 180 aa7.79□□□□□ -1.16
FOXCUT-201ENST00000628509 C5orf17Q8NAS9 161 aa7.79□□□□□ -1.16
FOXCUT-201ENST00000628509 NIPSNAP3BQ9BS92 247 aa7.79□□□□□ -1.16
FOXCUT-201ENST00000628509 SEC11CQ9BY50 192 aa7.79□□□□□ -1.16
FOXCUT-201ENST00000628509 OTORQ9NRC9 128 aa7.79□□□□□ -1.16
FOXCUT-201ENST00000628509 SMPXQ9UHP9 88 aa7.79□□□□□ -1.16
FOXCUT-201ENST00000628509 TRBV19A0A075B6N1 114 aa7.78□□□□□ -1.16
FOXCUT-201ENST00000628509 IGHV4OR15-8A0A075B7B6 117 aa7.78□□□□□ -1.16
FOXCUT-201ENST00000628509 A0A087WW49 117 aa7.78□□□□□ -1.16
FOXCUT-201ENST00000628509 TRAV5A0A0B4J249 113 aa7.78□□□□□ -1.16
FOXCUT-201ENST00000628509 TMEM218A2RU14 115 aa7.78□□□□□ -1.16
FOXCUT-201ENST00000628509 FAM74A7A6NL05 159 aa7.78□□□□□ -1.16
FOXCUT-201ENST00000628509 ATP6V1G1O75348 118 aa7.78□□□□□ -1.16
FOXCUT-201ENST00000628509 PF4P02776 101 aa7.78□□□□□ -1.16
FOXCUT-201ENST00000628509 CD28P10747 220 aa7.78□□□□□ -1.16
FOXCUT-201ENST00000628509 SYNJ2BPP57105 145 aa7.78□□□□□ -1.16
FOXCUT-201ENST00000628509 UBE2G2P60604 165 aa7.78□□□□□ -1.16
FOXCUT-201ENST00000628509 RPL11P62913 178 aaKnown RBP7.78□□□□□ -1.16
FOXCUT-201ENST00000628509 CCL20P78556 96 aa7.78□□□□□ -1.16
FOXCUT-201ENST00000628509 PNRC1Q12796 327 aaPredicted RBP7.78□□□□□ -1.16
FOXCUT-201ENST00000628509 KLF5Q13887 457 aaPredicted RBP7.78□□□□□ -1.16
FOXCUT-201ENST00000628509 C16orf54Q6UWD8 224 aa7.78□□□□□ -1.16
FOXCUT-201ENST00000628509 C10orf99Q6UWK7 81 aa7.78□□□□□ -1.16
FOXCUT-201ENST00000628509 SSX7Q7RTT5 188 aa7.78□□□□□ -1.16
FOXCUT-201ENST00000628509 SVBPQ8N300 66 aa7.78□□□□□ -1.16
FOXCUT-201ENST00000628509 OR9G4Q8NGQ1 327 aa7.78□□□□□ -1.16
FOXCUT-201ENST00000628509 DYNLRB2Q8TF09 96 aa7.78□□□□□ -1.16
FOXCUT-201ENST00000628509 BLNKQ8WV28 456 aa7.78□□□□□ -1.16
FOXCUT-201ENST00000628509 TMEM158Q8WZ71 300 aa7.78□□□□□ -1.16
FOXCUT-201ENST00000628509 FXYD5Q96DB9 178 aa7.78□□□□□ -1.16
FOXCUT-201ENST00000628509 CITED2Q99967 270 aaPredicted RBP7.78□□□□□ -1.16
FOXCUT-201ENST00000628509 RHPN1-AS1Q9BWJ2 59 aa7.78□□□□□ -1.16
FOXCUT-201ENST00000628509 BIN3Q9NQY0 253 aa7.78□□□□□ -1.16
FOXCUT-201ENST00000628509 U3KQE9 123 aa7.78□□□□□ -1.16
FOXCUT-201ENST00000628509 MAP1AP78559 2803 aaPredicted RBP7.78□□□□□ -1.16
FOXCUT-201ENST00000628509 FLNBO75369 2602 aaKnown RBP7.77□□□□□ -1.17
FOXCUT-201ENST00000628509 TRBV12-3P01733 135 aa7.77□□□□□ -1.17
FOXCUT-201ENST00000628509 SLC25A5P05141 298 aaKnown RBP7.77□□□□□ -1.17
FOXCUT-201ENST00000628509 SFTA3P0C7M3 94 aa7.77□□□□□ -1.17
FOXCUT-201ENST00000628509 IGLC2P0DOY2 106 aa7.77□□□□□ -1.17
FOXCUT-201ENST00000628509 PYYP10082 97 aa7.77□□□□□ -1.17
FOXCUT-201ENST00000628509 CNN1P51911 297 aaKnown RBP7.77□□□□□ -1.17
FOXCUT-201ENST00000628509 CMC4P56277 68 aaPredicted RBP7.77□□□□□ -1.17
FOXCUT-201ENST00000628509 UBE2G1P62253 170 aa7.77□□□□□ -1.17
FOXCUT-201ENST00000628509 RANP62826 216 aaKnown RBP7.77□□□□□ -1.17
FOXCUT-201ENST00000628509 SUMO1P63165 101 aaKnown RBP7.77□□□□□ -1.17
FOXCUT-201ENST00000628509 ICAM4Q14773 271 aa7.77□□□□□ -1.17
FOXCUT-201ENST00000628509 LINC00528Q8N1L1 170 aa7.77□□□□□ -1.17
FOXCUT-201ENST00000628509 MRPL53Q96EL3 112 aaKnown RBP7.77□□□□□ -1.17
FOXCUT-201ENST00000628509 TMPRSS5Q9H3S3 457 aa7.77□□□□□ -1.17
FOXCUT-201ENST00000628509 TRAV2A0A0B4J234 112 aa7.76□□□□□ -1.17
FOXCUT-201ENST00000628509 TRAV25A0A0B4J276 109 aa7.76□□□□□ -1.17
FOXCUT-201ENST00000628509 PGPA6NDG6 321 aa7.76□□□□□ -1.17
FOXCUT-201ENST00000628509 ZNF727A8MUV8 499 aa7.76□□□□□ -1.17
FOXCUT-201ENST00000628509 DNASE2O00115 360 aaPredicted RBP7.76□□□□□ -1.17
FOXCUT-201ENST00000628509 OVOL1O14753 267 aa7.76□□□□□ -1.17
FOXCUT-201ENST00000628509 SNAPINO95295 136 aa7.76□□□□□ -1.17
FOXCUT-201ENST00000628509 SRP19P09132 144 aaKnown RBP7.76□□□□□ -1.17
FOXCUT-201ENST00000628509 CBLN1P23435 193 aa7.76□□□□□ -1.17
FOXCUT-201ENST00000628509 AKR1C3P42330 323 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms