RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 TRBV25-1A0A075B6N4 114 aa6.39□□□□□ -1.39
VPS11-209ENST00000622309 PRRG2O14669 202 aa6.39□□□□□ -1.39
VPS11-209ENST00000622309 SRD5A1P18405 259 aa6.39□□□□□ -1.39
VPS11-209ENST00000622309 PI4KAP42356 2102 aa6.39□□□□□ -1.39
VPS11-209ENST00000622309 PRR20EP86478 221 aa6.39□□□□□ -1.39
VPS11-209ENST00000622309 PRR20CP86479 221 aa6.39□□□□□ -1.39
VPS11-209ENST00000622309 PRR20DP86480 221 aa6.39□□□□□ -1.39
VPS11-209ENST00000622309 PRR20BP86481 221 aa6.39□□□□□ -1.39
VPS11-209ENST00000622309 PRR20AP86496 221 aa6.39□□□□□ -1.39
VPS11-209ENST00000622309 CFAP126Q5VTH2 177 aa6.39□□□□□ -1.39
VPS11-209ENST00000622309 WFDC3Q8IUB2 231 aa6.39□□□□□ -1.39
VPS11-209ENST00000622309 PIP4P2Q8N4L2 257 aa6.39□□□□□ -1.39
VPS11-209ENST00000622309 OR1L8Q8NGR8 309 aa6.39□□□□□ -1.39
VPS11-209ENST00000622309 FGFBP3Q8TAT2 258 aa6.39□□□□□ -1.39
VPS11-209ENST00000622309 IFI27L1Q96BM0 104 aa6.39□□□□□ -1.39
VPS11-209ENST00000622309 ZNF837Q96EG3 531 aaPredicted RBP6.39□□□□□ -1.39
VPS11-209ENST00000622309 TTTY13Q9BZ97 58 aa6.39□□□□□ -1.39
VPS11-209ENST00000622309 RBP4P02753 201 aa6.39□□□□□ -1.39
VPS11-209ENST00000622309 SRYQ05066 204 aa6.39□□□□□ -1.39
VPS11-209ENST00000622309 MRPL14Q6P1L8 145 aaKnown RBP6.39□□□□□ -1.39
VPS11-209ENST00000622309 SGK494Q96LW2 274 aa6.39□□□□□ -1.39
VPS11-209ENST00000622309 HIST1H4GQ99525 98 aa6.39□□□□□ -1.39
VPS11-209ENST00000622309 V9GYY9 64 aa6.39□□□□□ -1.39
VPS11-209ENST00000622309 HEATR1Q9H583 2144 aaKnown RBP6.39□□□□□ -1.39
VPS11-209ENST00000622309 ACACBO00763 2458 aa6.39□□□□□ -1.39
VPS11-209ENST00000622309 IGHV3-15A0A0B4J1V0 119 aa6.38□□□□□ -1.39
VPS11-209ENST00000622309 PSMB2P49721 201 aa6.38□□□□□ -1.39
VPS11-209ENST00000622309 WDR31Q8NA23 367 aa6.38□□□□□ -1.39
VPS11-209ENST00000622309 PRRG4Q9BZD6 226 aa6.38□□□□□ -1.39
VPS11-209ENST00000622309 TMEM126AQ9H061 195 aa6.38□□□□□ -1.39
VPS11-209ENST00000622309 OTOGLQ3ZCN5 2332 aa6.38□□□□□ -1.39
VPS11-209ENST00000622309 A0A0J9YW62 118 aa6.38□□□□□ -1.39
VPS11-209ENST00000622309 IL4P05112 153 aa6.38□□□□□ -1.39
VPS11-209ENST00000622309 IFI27P40305 119 aaPredicted RBP6.38□□□□□ -1.39
VPS11-209ENST00000622309 EMP1P54849 157 aa6.38□□□□□ -1.39
VPS11-209ENST00000622309 ERVK-16P61578 105 aa6.38□□□□□ -1.39
VPS11-209ENST00000622309 TEN1Q86WV5 123 aa6.38□□□□□ -1.39
VPS11-209ENST00000622309 IGKV3D-11A0A0A0MRZ8 115 aa6.38□□□□□ -1.39
VPS11-209ENST00000622309 A0A1W2PR77 199 aa6.38□□□□□ -1.39
VPS11-209ENST00000622309 PRSS46E5RG02 174 aa6.38□□□□□ -1.39
VPS11-209ENST00000622309 SPINK2P20155 84 aa6.38□□□□□ -1.39
VPS11-209ENST00000622309 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.38□□□□□ -1.39
VPS11-209ENST00000622309 C1orf159Q96HA4 380 aa6.38□□□□□ -1.39
VPS11-209ENST00000622309 TMEM133Q9H2Q1 129 aa6.38□□□□□ -1.39
VPS11-209ENST00000622309 FBXL15Q9H469 300 aa6.38□□□□□ -1.39
VPS11-209ENST00000622309 DKK2Q9UBU2 259 aa6.38□□□□□ -1.39
VPS11-209ENST00000622309 LOC107984156A0A0G2JMH3 177 aa6.37□□□□□ -1.39
VPS11-209ENST00000622309 C16orf97H3BN30 126 aa6.37□□□□□ -1.39
VPS11-209ENST00000622309 HBDP02042 147 aa6.37□□□□□ -1.39
VPS11-209ENST00000622309 EVI2AP22794 236 aa6.37□□□□□ -1.39
VPS11-209ENST00000622309 MPV17P39210 176 aa6.37□□□□□ -1.39
VPS11-209ENST00000622309 ARL17AQ8IVW1 177 aa6.37□□□□□ -1.39
VPS11-209ENST00000622309 ZNF441Q8N8Z8 693 aa6.37□□□□□ -1.39
VPS11-209ENST00000622309 OR9G1Q8NH87 305 aa6.37□□□□□ -1.39
VPS11-209ENST00000622309 NCKAP5O14513 1909 aa6.37□□□□□ -1.39
VPS11-209ENST00000622309 AHCTF1Q8WYP5 2266 aa6.37□□□□□ -1.39
VPS11-209ENST00000622309 TPRP12270 2363 aaKnown RBP6.37□□□□□ -1.39
VPS11-209ENST00000622309 CRYGBP07316 175 aa6.37□□□□□ -1.39
VPS11-209ENST00000622309 FAM106CPP0CH98 169 aa6.37□□□□□ -1.39
VPS11-209ENST00000622309 SMCPP49901 116 aaPredicted RBP6.37□□□□□ -1.39
VPS11-209ENST00000622309 MEOX1P50221 254 aa6.37□□□□□ -1.39
VPS11-209ENST00000622309 FXYD7P58549 80 aa6.37□□□□□ -1.39
VPS11-209ENST00000622309 CFHR1Q03591 330 aa6.37□□□□□ -1.39
VPS11-209ENST00000622309 FAM106AQ4KMX7 169 aa6.37□□□□□ -1.39
VPS11-209ENST00000622309 CEP250Q9BV73 2442 aa6.37□□□□□ -1.39
VPS11-209ENST00000622309 TMSB15BA0A087X1C1 80 aa6.37□□□□□ -1.39
VPS11-209ENST00000622309 IGKV2D-26A0A0A0MRZ7 120 aa6.37□□□□□ -1.39
VPS11-209ENST00000622309 H3BVH4 76 aa6.37□□□□□ -1.39
VPS11-209ENST00000622309 IGLV3-19P01714 112 aa6.37□□□□□ -1.39
VPS11-209ENST00000622309 BRWD1-AS2P59051 145 aa6.37□□□□□ -1.39
VPS11-209ENST00000622309 PCBD1P61457 104 aa6.37□□□□□ -1.39
VPS11-209ENST00000622309 RIGQ13278 110 aa6.37□□□□□ -1.39
VPS11-209ENST00000622309 TAL2Q16559 108 aa6.37□□□□□ -1.39
VPS11-209ENST00000622309 KHDC1LQ5JSQ8 128 aa6.37□□□□□ -1.39
VPS11-209ENST00000622309 PPP1R27Q86WC6 154 aa6.37□□□□□ -1.39
VPS11-209ENST00000622309 CARD19Q96LW7 228 aa6.37□□□□□ -1.39
VPS11-209ENST00000622309 SLC25A33Q9BSK2 321 aa6.37□□□□□ -1.39
VPS11-209ENST00000622309 GFRA4Q9GZZ7 299 aa6.37□□□□□ -1.39
VPS11-209ENST00000622309 KLF13Q9Y2Y9 288 aaPredicted RBP6.37□□□□□ -1.39
VPS11-209ENST00000622309 USF3Q68DE3 2245 aa6.36□□□□□ -1.39
VPS11-209ENST00000622309 LMO7DNF2Z398 122 aa6.36□□□□□ -1.39
VPS11-209ENST00000622309 HAX1O00165 279 aa6.36□□□□□ -1.39
VPS11-209ENST00000622309 HOXA3O43365 443 aaPredicted RBP6.36□□□□□ -1.39
VPS11-209ENST00000622309 FCGR3BO75015 233 aa6.36□□□□□ -1.39
VPS11-209ENST00000622309 LINC00205P59089 165 aa6.36□□□□□ -1.39
VPS11-209ENST00000622309 LOXL1Q08397 574 aaPredicted RBP6.36□□□□□ -1.39
VPS11-209ENST00000622309 KLF17Q5JT82 389 aaPredicted RBP6.36□□□□□ -1.39
VPS11-209ENST00000622309 ZNF497Q6ZNH5 498 aa6.36□□□□□ -1.39
VPS11-209ENST00000622309 ZNF329Q86UD4 541 aa6.36□□□□□ -1.39
VPS11-209ENST00000622309 OR2H1Q9GZK4 316 aa6.36□□□□□ -1.39
VPS11-209ENST00000622309 EDA2RQ9HAV5 297 aa6.36□□□□□ -1.39
VPS11-209ENST00000622309 KLF12Q9Y4X4 402 aa6.36□□□□□ -1.39
VPS11-209ENST00000622309 CACNA1EQ15878 2313 aa6.36□□□□□ -1.39
VPS11-209ENST00000622309 A8MWV9 139 aa6.36□□□□□ -1.39
VPS11-209ENST00000622309 COL8A1P27658 744 aa6.36□□□□□ -1.39
VPS11-209ENST00000622309 SLC25A45Q8N413 288 aa6.36□□□□□ -1.39
VPS11-209ENST00000622309 MDS2Q8NDY4 140 aa6.36□□□□□ -1.39
VPS11-209ENST00000622309 PAXXQ9BUH6 204 aa6.36□□□□□ -1.39
VPS11-209ENST00000622309 FGF23Q9GZV9 251 aaPredicted RBP6.36□□□□□ -1.39
VPS11-209ENST00000622309 METRNQ9UJH8 293 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms