RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 CSTL1Q9H114 145 aa13.21□□□□□ -0.29
SCAMP4-213ENST00000621748 RABAC1Q9UI14 185 aa13.21□□□□□ -0.29
SCAMP4-213ENST00000621748 A0A0J9YWU9 116 aa13.2□□□□□ -0.3
SCAMP4-213ENST00000621748 KANTRA0A1W2PQU2 76 aa13.2□□□□□ -0.3
SCAMP4-213ENST00000621748 CAMLGP49069 296 aa13.2□□□□□ -0.3
SCAMP4-213ENST00000621748 USF2Q15853 346 aaPredicted RBP13.2□□□□□ -0.3
SCAMP4-213ENST00000621748 VWC2Q2TAL6 325 aa13.2□□□□□ -0.3
SCAMP4-213ENST00000621748 Q6ZRG5 221 aa13.2□□□□□ -0.3
SCAMP4-213ENST00000621748 STXBP6Q8NFX7 210 aa13.2□□□□□ -0.3
SCAMP4-213ENST00000621748 PPP1R14BQ96C90 147 aa13.2□□□□□ -0.3
SCAMP4-213ENST00000621748 PBDC1Q9BVG4 233 aa13.2□□□□□ -0.3
SCAMP4-213ENST00000621748 FBXL17Q9UF56 701 aa13.2□□□□□ -0.3
SCAMP4-213ENST00000621748 WDR83OSQ9Y284 106 aa13.2□□□□□ -0.3
SCAMP4-213ENST00000621748 K7EQG2 157 aa13.19□□□□□ -0.3
SCAMP4-213ENST00000621748 IL4P05112 153 aa13.19□□□□□ -0.3
SCAMP4-213ENST00000621748 HNRNPCP07910 306 aaKnown RBP eCLIP13.19□□□□□ -0.3
SCAMP4-213ENST00000621748 GRAMD2BQ96HH9 432 aa13.19□□□□□ -0.3
SCAMP4-213ENST00000621748 ALMS1Q8TCU4 4167 aa13.18□□□□□ -0.3
SCAMP4-213ENST00000621748 AGPAT2O15120 278 aa13.18□□□□□ -0.3
SCAMP4-213ENST00000621748 PSG1P11464 419 aa13.18□□□□□ -0.3
SCAMP4-213ENST00000621748 LYZP61626 148 aa13.18□□□□□ -0.3
SCAMP4-213ENST00000621748 EIF5AP63241 154 aaKnown RBP13.18□□□□□ -0.3
SCAMP4-213ENST00000621748 ZNF90Q03938 601 aa13.18□□□□□ -0.3
SCAMP4-213ENST00000621748 ZNF345Q14585 488 aa13.18□□□□□ -0.3
SCAMP4-213ENST00000621748 C16orf54Q6UWD8 224 aa13.18□□□□□ -0.3
SCAMP4-213ENST00000621748 DCANP1Q8TF63 244 aa13.18□□□□□ -0.3
SCAMP4-213ENST00000621748 ARPC5LQ9BPX5 153 aa13.18□□□□□ -0.3
SCAMP4-213ENST00000621748 RNF24Q9Y225 148 aa13.18□□□□□ -0.3
SCAMP4-213ENST00000621748 JTBO76095 146 aa13.17□□□□□ -0.3
SCAMP4-213ENST00000621748 ORM2P19652 201 aa13.17□□□□□ -0.3
SCAMP4-213ENST00000621748 EIF2B2P49770 351 aaKnown RBP13.17□□□□□ -0.3
SCAMP4-213ENST00000621748 PXDC1Q5TGL8 231 aa13.17□□□□□ -0.3
SCAMP4-213ENST00000621748 GLMPQ8WWB7 406 aa13.17□□□□□ -0.3
SCAMP4-213ENST00000621748 WDR61Q9GZS3 305 aaKnown RBP13.17□□□□□ -0.3
SCAMP4-213ENST00000621748 ARL6Q9H0F7 186 aa13.17□□□□□ -0.3
SCAMP4-213ENST00000621748 IGKV1D-37A0A075B6S9 117 aa13.16□□□□□ -0.3
SCAMP4-213ENST00000621748 G3V3Q6 166 aa13.16□□□□□ -0.3
SCAMP4-213ENST00000621748 ZNF688P0C7X2 276 aa13.16□□□□□ -0.3
SCAMP4-213ENST00000621748 LINC00869P0C866 280 aa13.16□□□□□ -0.3
SCAMP4-213ENST00000621748 KCNRGQ8N5I3 272 aa13.16□□□□□ -0.3
SCAMP4-213ENST00000621748 OR1B1Q8NGR6 318 aa13.16□□□□□ -0.3
SCAMP4-213ENST00000621748 RNF125Q96EQ8 232 aa13.16□□□□□ -0.3
SCAMP4-213ENST00000621748 RNF222A6NCQ9 220 aa13.15□□□□□ -0.3
SCAMP4-213ENST00000621748 HELTA6NFD8 242 aa13.15□□□□□ -0.3
SCAMP4-213ENST00000621748 BUB3O43684 328 aa13.15□□□□□ -0.3
SCAMP4-213ENST00000621748 COX7A2P2O60397 106 aa13.15□□□□□ -0.3
SCAMP4-213ENST00000621748 HYPMO75409 117 aa13.15□□□□□ -0.3
SCAMP4-213ENST00000621748 OR5G3P0C626 314 aa13.15□□□□□ -0.3
SCAMP4-213ENST00000621748 OR11H4Q8NGC9 324 aa13.15□□□□□ -0.3
SCAMP4-213ENST00000621748 OR1L4Q8NGR5 311 aa13.15□□□□□ -0.3
SCAMP4-213ENST00000621748 MGST2Q99735 147 aa13.15□□□□□ -0.3
SCAMP4-213ENST00000621748 NPCDR1Q9BY65 106 aa13.15□□□□□ -0.3
SCAMP4-213ENST00000621748 PARD6GQ9BYG4 376 aaPredicted RBP13.15□□□□□ -0.3
SCAMP4-213ENST00000621748 IGKV1OR2-108A0A075B7D4 117 aa13.14□□□□□ -0.31
SCAMP4-213ENST00000621748 CA1P00915 261 aaPredicted RBP13.14□□□□□ -0.31
SCAMP4-213ENST00000621748 RPL29P47914 159 aaKnown RBP13.14□□□□□ -0.31
SCAMP4-213ENST00000621748 PMS2P11Q13670 270 aa13.14□□□□□ -0.31
SCAMP4-213ENST00000621748 TMUB2Q71RG4 321 aa13.14□□□□□ -0.31
SCAMP4-213ENST00000621748 GATAD1Q8WUU5 269 aa13.14□□□□□ -0.31
SCAMP4-213ENST00000621748 GNPNAT1Q96EK6 184 aaPredicted RBP13.14□□□□□ -0.31
SCAMP4-213ENST00000621748 PFDN5Q99471 154 aa13.14□□□□□ -0.31
SCAMP4-213ENST00000621748 SLC45A2Q9UMX9 530 aa13.14□□□□□ -0.31
SCAMP4-213ENST00000621748 PXMP4Q9Y6I8 212 aa13.14□□□□□ -0.31
SCAMP4-213ENST00000621748 ELOA3CA0A087WX78 387 aaPredicted RBP13.13□□□□□ -0.31
SCAMP4-213ENST00000621748 KNCNA6PVL3 124 aa13.13□□□□□ -0.31
SCAMP4-213ENST00000621748 BCL2L11O43521 198 aa13.13□□□□□ -0.31
SCAMP4-213ENST00000621748 GATA2P23769 480 aaPredicted RBP13.13□□□□□ -0.31
SCAMP4-213ENST00000621748 B2MP61769 119 aa13.13□□□□□ -0.31
SCAMP4-213ENST00000621748 OPCMLQ14982 345 aa13.13□□□□□ -0.31
SCAMP4-213ENST00000621748 STHQ8IWL8 128 aa13.13□□□□□ -0.31
SCAMP4-213ENST00000621748 RARRES2Q99969 163 aa13.13□□□□□ -0.31
SCAMP4-213ENST00000621748 ZNF471Q9BX82 626 aaPredicted RBP13.13□□□□□ -0.31
SCAMP4-213ENST00000621748 SLC39A9Q9NUM3 307 aa13.13□□□□□ -0.31
SCAMP4-213ENST00000621748 HIGD1AQ9Y241 93 aa13.13□□□□□ -0.31
SCAMP4-213ENST00000621748 CXorf65A6NEN9 183 aa13.12□□□□□ -0.31
SCAMP4-213ENST00000621748 GIG44P09565 113 aaPredicted RBP13.12□□□□□ -0.31
SCAMP4-213ENST00000621748 ATF4P18848 351 aaPredicted RBP13.12□□□□□ -0.31
SCAMP4-213ENST00000621748 TRPT1Q86TN4 253 aaKnown RBP13.12□□□□□ -0.31
SCAMP4-213ENST00000621748 HSD17B11Q8NBQ5 300 aa13.12□□□□□ -0.31
SCAMP4-213ENST00000621748 OR11H2Q8NH07 326 aa13.12□□□□□ -0.31
SCAMP4-213ENST00000621748 WFDC1Q9HC57 220 aa13.12□□□□□ -0.31
SCAMP4-213ENST00000621748 DOK5Q9P104 306 aa13.12□□□□□ -0.31
SCAMP4-213ENST00000621748 CXCL2P19875 107 aa13.11□□□□□ -0.31
SCAMP4-213ENST00000621748 C10orf113Q5VZT2 155 aa13.11□□□□□ -0.31
SCAMP4-213ENST00000621748 MIC13Q5XKP0 118 aa13.11□□□□□ -0.31
SCAMP4-213ENST00000621748 RPL7L1Q6DKI1 246 aaKnown RBP13.11□□□□□ -0.31
SCAMP4-213ENST00000621748 EIF5AL1Q6IS14 154 aaKnown RBP13.11□□□□□ -0.31
SCAMP4-213ENST00000621748 SIGLEC15Q6ZMC9 328 aa13.11□□□□□ -0.31
SCAMP4-213ENST00000621748 DNAJC4Q9NNZ3 241 aa13.11□□□□□ -0.31
SCAMP4-213ENST00000621748 TIMM9Q9Y5J7 89 aa13.11□□□□□ -0.31
SCAMP4-213ENST00000621748 MBP02144 154 aa13.1□□□□□ -0.31
SCAMP4-213ENST00000621748 ACOT6Q3I5F7 207 aaPredicted RBP13.1□□□□□ -0.31
SCAMP4-213ENST00000621748 PSMG4Q5JS54 123 aa13.1□□□□□ -0.31
SCAMP4-213ENST00000621748 ACTL10Q5JWF8 245 aa13.1□□□□□ -0.31
SCAMP4-213ENST00000621748 FFAR4Q5NUL3 377 aa13.1□□□□□ -0.31
SCAMP4-213ENST00000621748 NRN1Q9NPD7 142 aa13.1□□□□□ -0.31
SCAMP4-213ENST00000621748 TPT1P13693 172 aaKnown RBP13.09□□□□□ -0.31
SCAMP4-213ENST00000621748 PRR20EP86478 221 aa13.09□□□□□ -0.31
SCAMP4-213ENST00000621748 PRR20CP86479 221 aa13.09□□□□□ -0.31
SCAMP4-213ENST00000621748 PRR20DP86480 221 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms