RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 DIAPH2-AS1Q14236 149 aa12.36□□□□□ -0.43
GPN1-212ENST00000616939 KIR3DS1Q14943 382 aa12.36□□□□□ -0.43
GPN1-212ENST00000616939 HCP5Q6MZN7 132 aa12.36□□□□□ -0.43
GPN1-212ENST00000616939 ADAMTSL5Q6ZMM2 481 aa12.36□□□□□ -0.43
GPN1-212ENST00000616939 PSG8Q9UQ74 426 aa12.36□□□□□ -0.43
GPN1-212ENST00000616939 TMEM238C9JI98 176 aa12.35□□□□□ -0.43
GPN1-212ENST00000616939 H3BTX0 84 aa12.35□□□□□ -0.43
GPN1-212ENST00000616939 K7EM74 188 aa12.35□□□□□ -0.43
GPN1-212ENST00000616939 TNFRSF13BO14836 293 aaPredicted RBP12.35□□□□□ -0.43
GPN1-212ENST00000616939 FCN3O75636 299 aa12.35□□□□□ -0.43
GPN1-212ENST00000616939 LYZP61626 148 aa12.35□□□□□ -0.43
GPN1-212ENST00000616939 PAX8Q06710 450 aa12.35□□□□□ -0.43
GPN1-212ENST00000616939 PSG3Q16557 428 aa12.35□□□□□ -0.43
GPN1-212ENST00000616939 OR2K2Q8NGT1 345 aa12.35□□□□□ -0.43
GPN1-212ENST00000616939 SRSF8Q9BRL6 282 aaKnown RBP12.35□□□□□ -0.43
GPN1-212ENST00000616939 SHANK2-AS3Q9BTD1 123 aa12.35□□□□□ -0.43
GPN1-212ENST00000616939 PRO3102Q9H379 93 aa12.35□□□□□ -0.43
GPN1-212ENST00000616939 NGBQ9NPG2 151 aa12.35□□□□□ -0.43
GPN1-212ENST00000616939 SIGLEC8Q9NYZ4 499 aa12.35□□□□□ -0.43
GPN1-212ENST00000616939 A0A0G2JLM5 398 aa12.34□□□□□ -0.43
GPN1-212ENST00000616939 SHISA9B4DS77 424 aa12.34□□□□□ -0.43
GPN1-212ENST00000616939 H3BRN7 92 aa12.34□□□□□ -0.43
GPN1-212ENST00000616939 HBDP02042 147 aa12.34□□□□□ -0.43
GPN1-212ENST00000616939 CCL11P51671 97 aa12.34□□□□□ -0.43
GPN1-212ENST00000616939 NHLH1Q02575 133 aa12.34□□□□□ -0.43
GPN1-212ENST00000616939 FAM104BQ5XKR9 115 aa12.34□□□□□ -0.43
GPN1-212ENST00000616939 DHRS13Q6UX07 377 aa12.34□□□□□ -0.43
GPN1-212ENST00000616939 EXOC3-AS1Q8N2X6 119 aa12.34□□□□□ -0.43
GPN1-212ENST00000616939 TNFRSF14Q92956 283 aa12.34□□□□□ -0.43
GPN1-212ENST00000616939 SERTM2A0A1B0GWG4 89 aa12.34□□□□□ -0.43
GPN1-212ENST00000616939 TEX22C9J3V5 150 aa12.34□□□□□ -0.43
GPN1-212ENST00000616939 SAP30O75446 220 aa12.34□□□□□ -0.43
GPN1-212ENST00000616939 IFI27P40305 119 aaPredicted RBP12.34□□□□□ -0.43
GPN1-212ENST00000616939 SIGLEC15Q6ZMC9 328 aa12.34□□□□□ -0.43
GPN1-212ENST00000616939 ASCL5Q7RTU5 278 aa12.34□□□□□ -0.43
GPN1-212ENST00000616939 COX8CQ7Z4L0 72 aa12.34□□□□□ -0.43
GPN1-212ENST00000616939 PRELID3AQ96N28 172 aa12.34□□□□□ -0.43
GPN1-212ENST00000616939 H3BUT2 72 aa12.33□□□□□ -0.44
GPN1-212ENST00000616939 NDUFB3O43676 98 aa12.33□□□□□ -0.44
GPN1-212ENST00000616939 CD40P25942 277 aa12.33□□□□□ -0.44
GPN1-212ENST00000616939 UQCRFS1P47985 274 aa12.33□□□□□ -0.44
GPN1-212ENST00000616939 TMEM155Q4W5P6 130 aa12.33□□□□□ -0.44
GPN1-212ENST00000616939 LHFPL4Q7Z7J7 247 aa12.33□□□□□ -0.44
GPN1-212ENST00000616939 ORMDL3Q8N138 153 aa12.33□□□□□ -0.44
GPN1-212ENST00000616939 OR8A1Q8NGG7 326 aa12.33□□□□□ -0.44
GPN1-212ENST00000616939 JKAMPQ9P055 326 aa12.33□□□□□ -0.44
GPN1-212ENST00000616939 HIGD1BQ9P298 99 aa12.33□□□□□ -0.44
GPN1-212ENST00000616939 EYSQ5T1H1 3165 aa12.32□□□□□ -0.44
GPN1-212ENST00000616939 WDFY3Q8IZQ1 3526 aa12.32□□□□□ -0.44
GPN1-212ENST00000616939 PPIAL4EA0A075B759 164 aa12.32□□□□□ -0.44
GPN1-212ENST00000616939 A0A1W2PPM0 123 aa12.32□□□□□ -0.44
GPN1-212ENST00000616939 I3L2K1 104 aa12.32□□□□□ -0.44
GPN1-212ENST00000616939 PPIAL4FP0DN26 164 aa12.32□□□□□ -0.44
GPN1-212ENST00000616939 PLA2G2CQ5R387 149 aa12.32□□□□□ -0.44
GPN1-212ENST00000616939 ABHD17AQ96GS6 310 aa12.32□□□□□ -0.44
GPN1-212ENST00000616939 RITA1Q96K30 269 aa12.32□□□□□ -0.44
GPN1-212ENST00000616939 SIGLEC9Q9Y336 463 aa12.32□□□□□ -0.44
GPN1-212ENST00000616939 CHTOPQ9Y3Y2 248 aaKnown RBP12.32□□□□□ -0.44
GPN1-212ENST00000616939 LINC01546A6NGU7 62 aa12.32□□□□□ -0.44
GPN1-212ENST00000616939 C17orf100A8MU93 164 aa12.32□□□□□ -0.44
GPN1-212ENST00000616939 D6R8Y8 96 aa12.32□□□□□ -0.44
GPN1-212ENST00000616939 MRPS12O15235 138 aaKnown RBP12.32□□□□□ -0.44
GPN1-212ENST00000616939 CRIP1P50238 77 aa12.32□□□□□ -0.44
GPN1-212ENST00000616939 CACNG7P62955 275 aa12.32□□□□□ -0.44
GPN1-212ENST00000616939 LINC01559Q495D7 138 aa12.32□□□□□ -0.44
GPN1-212ENST00000616939 ALKBH2Q6NS38 261 aa12.32□□□□□ -0.44
GPN1-212ENST00000616939 Q71RC1 249 aaPredicted RBP12.32□□□□□ -0.44
GPN1-212ENST00000616939 ZNF414Q96IQ9 312 aa12.32□□□□□ -0.44
GPN1-212ENST00000616939 GUCD1Q96NT3 240 aa12.32□□□□□ -0.44
GPN1-212ENST00000616939 RASL11BQ9BPW5 248 aa12.32□□□□□ -0.44
GPN1-212ENST00000616939 TIMM8BQ9Y5J9 83 aaPredicted RBP12.32□□□□□ -0.44
GPN1-212ENST00000616939 CADP27708 2225 aa12.31□□□□□ -0.44
GPN1-212ENST00000616939 FBLL1A6NHQ2 334 aaKnown RBP12.31□□□□□ -0.44
GPN1-212ENST00000616939 TMEM178BH3BS89 294 aa12.31□□□□□ -0.44
GPN1-212ENST00000616939 CDX4O14627 284 aaPredicted RBP12.31□□□□□ -0.44
GPN1-212ENST00000616939 SNAI2O43623 268 aa12.31□□□□□ -0.44
GPN1-212ENST00000616939 LOXP28300 417 aaPredicted RBP12.31□□□□□ -0.44
GPN1-212ENST00000616939 LOXL1Q08397 574 aaPredicted RBP12.31□□□□□ -0.44
GPN1-212ENST00000616939 PDE6HQ13956 83 aa12.31□□□□□ -0.44
GPN1-212ENST00000616939 C1orf185Q5T7R7 199 aa12.31□□□□□ -0.44
GPN1-212ENST00000616939 IFI27L1Q96BM0 104 aa12.31□□□□□ -0.44
GPN1-212ENST00000616939 THYN1Q9P016 225 aa12.31□□□□□ -0.44
GPN1-212ENST00000616939 KAAG1Q9UBP8 84 aa12.31□□□□□ -0.44
GPN1-212ENST00000616939 NKX2-8O15522 239 aa12.3□□□□□ -0.44
GPN1-212ENST00000616939 FAM106CPP0CH98 169 aa12.3□□□□□ -0.44
GPN1-212ENST00000616939 FAM106AQ4KMX7 169 aa12.3□□□□□ -0.44
GPN1-212ENST00000616939 FAM215AQ9Y5M1 114 aa12.3□□□□□ -0.44
GPN1-212ENST00000616939 KNTC1P50748 2209 aa12.3□□□□□ -0.44
GPN1-212ENST00000616939 CFAP54Q96N23 3096 aa12.3□□□□□ -0.44
GPN1-212ENST00000616939 ENSAO43768 121 aaKnown RBP12.3□□□□□ -0.44
GPN1-212ENST00000616939 CEACAM4O75871 244 aa12.3□□□□□ -0.44
GPN1-212ENST00000616939 IGKV1-17P01599 117 aa12.3□□□□□ -0.44
GPN1-212ENST00000616939 IGHV1-8P0DP01 117 aa12.3□□□□□ -0.44
GPN1-212ENST00000616939 HLA-DRB4P13762 266 aa12.3□□□□□ -0.44
GPN1-212ENST00000616939 WT1P19544 449 aaPredicted RBP12.3□□□□□ -0.44
GPN1-212ENST00000616939 MRPL51Q4U2R6 128 aaKnown RBP12.3□□□□□ -0.44
GPN1-212ENST00000616939 S100A7AQ86SG5 101 aa12.3□□□□□ -0.44
GPN1-212ENST00000616939 TMEM133Q9H2Q1 129 aa12.3□□□□□ -0.44
GPN1-212ENST00000616939 INSIG2Q9Y5U4 225 aa12.3□□□□□ -0.44
GPN1-212ENST00000616939 SPCS1Q9Y6A9 102 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms