RNA–Protein interactions for RNA: ENST00000601816.3

PNKP-216, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-216ENST00000601816 FAM78BQ5VT40 261 aa18.78■□□□□ 0.6
PNKP-216ENST00000601816 ZNF705AQ6ZN79 300 aaPredicted RBP18.78■□□□□ 0.6
PNKP-216ENST00000601816 Q6ZTC4 211 aa18.78■□□□□ 0.6
PNKP-216ENST00000601816 ZNF709Q8N972 641 aa18.78■□□□□ 0.6
PNKP-216ENST00000601816 ZNF431Q8TF32 576 aaPredicted RBP18.78■□□□□ 0.6
PNKP-216ENST00000601816 C17orf77Q96MU5 243 aa18.78■□□□□ 0.6
PNKP-216ENST00000601816 A0A0J9YX75 114 aa18.77■□□□□ 0.6
PNKP-216ENST00000601816 FAM25EA8MYX2 175 aa18.77■□□□□ 0.6
PNKP-216ENST00000601816 IGLL5B9A064 214 aa18.77■□□□□ 0.6
PNKP-216ENST00000601816 OR5G3P0C626 314 aa18.77■□□□□ 0.6
PNKP-216ENST00000601816 PSG9Q00887 426 aa18.77■□□□□ 0.6
PNKP-216ENST00000601816 TEPPQ6URK8 271 aa18.77■□□□□ 0.6
PNKP-216ENST00000601816 SEC22CQ9BRL7 303 aa18.77■□□□□ 0.6
PNKP-216ENST00000601816 SLC35B3Q9H1N7 401 aa18.77■□□□□ 0.6
PNKP-216ENST00000601816 CELA1Q9UNI1 258 aa18.77■□□□□ 0.6
PNKP-216ENST00000601816 TRAV10A0A0B4J240 114 aa18.76■□□□□ 0.59
PNKP-216ENST00000601816 C7orf66A4D0T2 115 aa18.76■□□□□ 0.59
PNKP-216ENST00000601816 ZNF705FA8MVS1 300 aaPredicted RBP18.76■□□□□ 0.59
PNKP-216ENST00000601816 K7EPK0 472 aa18.76■□□□□ 0.59
PNKP-216ENST00000601816 L7N2F9 121 aa18.76■□□□□ 0.59
PNKP-216ENST00000601816 ZNF705DP0CH99 300 aaPredicted RBP18.76■□□□□ 0.59
PNKP-216ENST00000601816 ZNF705BP0CI00 300 aaPredicted RBP18.76■□□□□ 0.59
PNKP-216ENST00000601816 VAMP2P63027 116 aa18.76■□□□□ 0.59
PNKP-216ENST00000601816 SLC38A11Q08AI6 406 aa18.76■□□□□ 0.59
PNKP-216ENST00000601816 S100A7AQ86SG5 101 aa18.76■□□□□ 0.59
PNKP-216ENST00000601816 NEU1Q99519 415 aa18.76■□□□□ 0.59
PNKP-216ENST00000601816 IGHV3OR16-12A0A075B7B8 117 aa18.75■□□□□ 0.59
PNKP-216ENST00000601816 RPL7P18124 248 aaKnown RBP18.75■□□□□ 0.59
PNKP-216ENST00000601816 FGL1Q08830 312 aa18.75■□□□□ 0.59
PNKP-216ENST00000601816 LINC00299Q6ZSB3 139 aa18.75■□□□□ 0.59
PNKP-216ENST00000601816 ARL6Q9H0F7 186 aa18.75■□□□□ 0.59
PNKP-216ENST00000601816 LSM5Q9Y4Y9 91 aaKnown RBP18.75■□□□□ 0.59
PNKP-216ENST00000601816 C5orf51A6NDU8 294 aa18.74■□□□□ 0.59
PNKP-216ENST00000601816 SMIM9A6NGZ8 99 aa18.74■□□□□ 0.59
PNKP-216ENST00000601816 H2AFB2P0C5Z0 115 aa18.74■□□□□ 0.59
PNKP-216ENST00000601816 ARL16Q0P5N6 197 aa18.74■□□□□ 0.59
PNKP-216ENST00000601816 ZNF546Q86UE3 836 aa18.74■□□□□ 0.59
PNKP-216ENST00000601816 C12orf45Q8N5I9 185 aaPredicted RBP18.74■□□□□ 0.59
PNKP-216ENST00000601816 UHRF2Q96PU4 802 aa18.74■□□□□ 0.59
PNKP-216ENST00000601816 GGACTQ9BVM4 153 aa18.74■□□□□ 0.59
PNKP-216ENST00000601816 FAM240BA0A1B0GVZ2 78 aa18.73■□□□□ 0.59
PNKP-216ENST00000601816 RPP25LQ8N5L8 163 aaKnown RBP18.73■□□□□ 0.59
PNKP-216ENST00000601816 GOLT1BQ9Y3E0 138 aa18.73■□□□□ 0.59
PNKP-216ENST00000601816 BIRC6Q9NR09 4857 aa18.72■□□□□ 0.59
PNKP-216ENST00000601816 TRAV8-2A0A0B4J237 113 aa18.72■□□□□ 0.59
PNKP-216ENST00000601816 TMEM189A5PLL7 270 aa18.72■□□□□ 0.59
PNKP-216ENST00000601816 GOSR2O14653 212 aa18.72■□□□□ 0.59
PNKP-216ENST00000601816 DEDDO75618 318 aa18.72■□□□□ 0.59
PNKP-216ENST00000601816 BCAP31P51572 246 aa18.72■□□□□ 0.59
PNKP-216ENST00000601816 C12orf74Q32Q52 190 aa18.72■□□□□ 0.59
PNKP-216ENST00000601816 IGFL4Q6B9Z1 124 aa18.72■□□□□ 0.59
PNKP-216ENST00000601816 MZT2BQ6NZ67 158 aa18.72■□□□□ 0.59
PNKP-216ENST00000601816 ZNF767PQ75MW2 155 aa18.72■□□□□ 0.59
PNKP-216ENST00000601816 S100ZQ8WXG8 99 aa18.72■□□□□ 0.59
PNKP-216ENST00000601816 APLNQ9ULZ1 77 aa18.72■□□□□ 0.59
PNKP-216ENST00000601816 RNF24Q9Y225 148 aa18.72■□□□□ 0.59
PNKP-216ENST00000601816 RFNGQ9Y644 331 aa18.72■□□□□ 0.59
PNKP-216ENST00000601816 A8MTW9 85 aa18.71■□□□□ 0.59
PNKP-216ENST00000601816 PXDC1Q5TGL8 231 aa18.71■□□□□ 0.59
PNKP-216ENST00000601816 RNF182Q8N6D2 247 aa18.71■□□□□ 0.59
PNKP-216ENST00000601816 C2orf50Q96LR7 162 aa18.71■□□□□ 0.59
PNKP-216ENST00000601816 ARV1Q9H2C2 271 aa18.71■□□□□ 0.59
PNKP-216ENST00000601816 AGPAT2O15120 278 aa18.7■□□□□ 0.58
PNKP-216ENST00000601816 DUSP14O95147 198 aaKnown RBP18.7■□□□□ 0.58
PNKP-216ENST00000601816 CAV2P51636 162 aa18.7■□□□□ 0.58
PNKP-216ENST00000601816 EMP1P54849 157 aa18.7■□□□□ 0.58
PNKP-216ENST00000601816 PATE2Q6UY27 113 aa18.7■□□□□ 0.58
PNKP-216ENST00000601816 CNN1P51911 297 aaKnown RBP18.69■□□□□ 0.58
PNKP-216ENST00000601816 AMTNQ6UX39 209 aa18.69■□□□□ 0.58
PNKP-216ENST00000601816 ZNF738Q8NE65 137 aa18.69■□□□□ 0.58
PNKP-216ENST00000601816 IGHV4-4A0A075B6R2 117 aa18.68■□□□□ 0.58
PNKP-216ENST00000601816 A0A087X0K7 114 aa18.68■□□□□ 0.58
PNKP-216ENST00000601816 DEFB131BA0A096LNP1 70 aa18.68■□□□□ 0.58
PNKP-216ENST00000601816 SPART-AS1P0CW21 52 aa18.68■□□□□ 0.58
PNKP-216ENST00000601816 PVALBP20472 110 aaPredicted RBP18.68■□□□□ 0.58
PNKP-216ENST00000601816 C1orf158Q8N1D5 194 aa18.68■□□□□ 0.58
PNKP-216ENST00000601816 MGST2Q99735 147 aa18.68■□□□□ 0.58
PNKP-216ENST00000601816 RNF126Q9BV68 326 aa18.68■□□□□ 0.58
PNKP-216ENST00000601816 HBE1P02100 147 aa18.67■□□□□ 0.58
PNKP-216ENST00000601816 AMBPP02760 352 aa18.67■□□□□ 0.58
PNKP-216ENST00000601816 S100A10P60903 97 aa18.67■□□□□ 0.58
PNKP-216ENST00000601816 ASAH1Q13510 395 aa18.67■□□□□ 0.58
PNKP-216ENST00000601816 LRRC20Q8TCA0 184 aa18.67■□□□□ 0.58
PNKP-216ENST00000601816 IGF2BP2-AS1Q96M15 143 aa18.67■□□□□ 0.58
PNKP-216ENST00000601816 C11orf1Q9H5F2 150 aa18.67■□□□□ 0.58
PNKP-216ENST00000601816 KMT2AQ03164 3969 aa18.67■□□□□ 0.58
PNKP-216ENST00000601816 COX7A2P2O60397 106 aa18.66■□□□□ 0.58
PNKP-216ENST00000601816 CST7O76096 145 aa18.66■□□□□ 0.58
PNKP-216ENST00000601816 LINC00305Q7Z4B0 112 aa18.66■□□□□ 0.58
PNKP-216ENST00000601816 OR11H7Q8NGC8 314 aa18.66■□□□□ 0.58
PNKP-216ENST00000601816 TEX48A0A1B0GUV7 120 aa18.65■□□□□ 0.58
PNKP-216ENST00000601816 FAM24AA6NFZ4 105 aa18.65■□□□□ 0.58
PNKP-216ENST00000601816 RAB31Q13636 194 aa18.65■□□□□ 0.58
PNKP-216ENST00000601816 TMEM208Q9BTX3 173 aa18.65■□□□□ 0.58
PNKP-216ENST00000601816 VPS13DQ5THJ4 4388 aa18.64■□□□□ 0.57
PNKP-216ENST00000601816 LOC102723971A0A1B0GUV8 181 aa18.64■□□□□ 0.57
PNKP-216ENST00000601816 MRPS12O15235 138 aaKnown RBP18.64■□□□□ 0.57
PNKP-216ENST00000601816 CXCL3P19876 107 aa18.64■□□□□ 0.57
PNKP-216ENST00000601816 CAMLGP49069 296 aa18.64■□□□□ 0.57
PNKP-216ENST00000601816 PRR20EP86478 221 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms