RNA–Protein interactions for RNA: ENST00000600841.1

NOTCH3-205, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-205ENST00000600841 S100A7AQ86SG5 101 aa12.22□□□□□ -0.45
NOTCH3-205ENST00000600841 SHANK2-AS3Q9BTD1 123 aa12.22□□□□□ -0.45
NOTCH3-205ENST00000600841 SCRT1Q9BWW7 348 aa12.22□□□□□ -0.45
NOTCH3-205ENST00000600841 SLC25A39Q9BZJ4 359 aaPredicted RBP12.22□□□□□ -0.45
NOTCH3-205ENST00000600841 XCL2Q9UBD3 114 aa12.22□□□□□ -0.45
NOTCH3-205ENST00000600841 IGHV4-28A0A0C4DH34 117 aa12.21□□□□□ -0.45
NOTCH3-205ENST00000600841 H3BRN7 92 aa12.21□□□□□ -0.45
NOTCH3-205ENST00000600841 IGKV3-20P01619 116 aa12.21□□□□□ -0.45
NOTCH3-205ENST00000600841 OR5G3P0C626 314 aa12.21□□□□□ -0.45
NOTCH3-205ENST00000600841 PVALBP20472 110 aaPredicted RBP12.21□□□□□ -0.45
NOTCH3-205ENST00000600841 CAV2P51636 162 aa12.21□□□□□ -0.45
NOTCH3-205ENST00000600841 SLC38A11Q08AI6 406 aa12.21□□□□□ -0.45
NOTCH3-205ENST00000600841 SPATA31B1PQ5VZV4 182 aa12.21□□□□□ -0.45
NOTCH3-205ENST00000600841 RPRMQ9NS64 109 aa12.21□□□□□ -0.45
NOTCH3-205ENST00000600841 X6R8D5 127 aa12.21□□□□□ -0.45
NOTCH3-205ENST00000600841 S100A10P60903 97 aa12.2□□□□□ -0.46
NOTCH3-205ENST00000600841 EBLN2Q6P2I7 272 aa12.2□□□□□ -0.46
NOTCH3-205ENST00000600841 NRARPQ7Z6K4 114 aa12.2□□□□□ -0.46
NOTCH3-205ENST00000600841 ZNF546Q86UE3 836 aa12.2□□□□□ -0.46
NOTCH3-205ENST00000600841 CLUHP3Q96NS8 147 aa12.2□□□□□ -0.46
NOTCH3-205ENST00000600841 ARL6Q9H0F7 186 aa12.2□□□□□ -0.46
NOTCH3-205ENST00000600841 GPN1Q9HCN4 374 aaPredicted RBP12.2□□□□□ -0.46
NOTCH3-205ENST00000600841 GOSR2O14653 212 aa12.19□□□□□ -0.46
NOTCH3-205ENST00000600841 AGPAT2O15120 278 aa12.19□□□□□ -0.46
NOTCH3-205ENST00000600841 RBMY1A1P0DJD3 496 aaKnown RBP12.19□□□□□ -0.46
NOTCH3-205ENST00000600841 RBMY1CP0DJD4 496 aa12.19□□□□□ -0.46
NOTCH3-205ENST00000600841 RPL7P18124 248 aaKnown RBP12.19□□□□□ -0.46
NOTCH3-205ENST00000600841 RBMY1FQ15415 496 aaKnown RBP12.19□□□□□ -0.46
NOTCH3-205ENST00000600841 PXDC1Q5TGL8 231 aa12.19□□□□□ -0.46
NOTCH3-205ENST00000600841 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.19□□□□□ -0.46
NOTCH3-205ENST00000600841 OR4B1Q8NGF8 309 aa12.19□□□□□ -0.46
NOTCH3-205ENST00000600841 C20orf173Q96LM9 149 aa12.19□□□□□ -0.46
NOTCH3-205ENST00000600841 C17orf77Q96MU5 243 aa12.19□□□□□ -0.46
NOTCH3-205ENST00000600841 UHRF2Q96PU4 802 aa12.19□□□□□ -0.46
NOTCH3-205ENST00000600841 C11orf1Q9H5F2 150 aa12.19□□□□□ -0.46
NOTCH3-205ENST00000600841 RNF24Q9Y225 148 aa12.19□□□□□ -0.46
NOTCH3-205ENST00000600841 FAM24AA6NFZ4 105 aa12.18□□□□□ -0.46
NOTCH3-205ENST00000600841 CST7O76096 145 aa12.18□□□□□ -0.46
NOTCH3-205ENST00000600841 FGL1Q08830 312 aa12.18□□□□□ -0.46
NOTCH3-205ENST00000600841 LINC00476Q8WZB0 136 aa12.18□□□□□ -0.46
NOTCH3-205ENST00000600841 HRH4Q9H3N8 390 aa12.18□□□□□ -0.46
NOTCH3-205ENST00000600841 A0A0J9YX75 114 aa12.17□□□□□ -0.46
NOTCH3-205ENST00000600841 F6UB75 175 aa12.17□□□□□ -0.46
NOTCH3-205ENST00000600841 INMT-MINDY4F8WBC2 141 aa12.17□□□□□ -0.46
NOTCH3-205ENST00000600841 FXYD7P58549 80 aa12.17□□□□□ -0.46
NOTCH3-205ENST00000600841 PSG9Q00887 426 aa12.17□□□□□ -0.46
NOTCH3-205ENST00000600841 IL15RAQ13261 267 aa12.17□□□□□ -0.46
NOTCH3-205ENST00000600841 RAB31Q13636 194 aa12.17□□□□□ -0.46
NOTCH3-205ENST00000600841 RAB32Q13637 225 aa12.17□□□□□ -0.46
NOTCH3-205ENST00000600841 FAM78BQ5VT40 261 aa12.17□□□□□ -0.46
NOTCH3-205ENST00000600841 MGST2Q99735 147 aa12.17□□□□□ -0.46
NOTCH3-205ENST00000600841 ARV1Q9H2C2 271 aa12.17□□□□□ -0.46
NOTCH3-205ENST00000600841 LYRM2Q9NU23 88 aaPredicted RBP12.17□□□□□ -0.46
NOTCH3-205ENST00000600841 PATE2Q6UY27 113 aa12.16□□□□□ -0.46
NOTCH3-205ENST00000600841 STX12Q86Y82 276 aa12.16□□□□□ -0.46
NOTCH3-205ENST00000600841 ZNF709Q8N972 641 aa12.16□□□□□ -0.46
NOTCH3-205ENST00000600841 UQCC1Q9NVA1 299 aa12.16□□□□□ -0.46
NOTCH3-205ENST00000600841 ELOA3CA0A087WX78 387 aaPredicted RBP12.15□□□□□ -0.46
NOTCH3-205ENST00000600841 TRAV8-2A0A0B4J237 113 aa12.15□□□□□ -0.46
NOTCH3-205ENST00000600841 COX7A2P2O60397 106 aa12.15□□□□□ -0.46
NOTCH3-205ENST00000600841 PRAF2O60831 178 aa12.15□□□□□ -0.46
NOTCH3-205ENST00000600841 LY6G6CO95867 125 aa12.15□□□□□ -0.46
NOTCH3-205ENST00000600841 S100A11P31949 105 aa12.15□□□□□ -0.46
NOTCH3-205ENST00000600841 CAMLGP49069 296 aa12.15□□□□□ -0.46
NOTCH3-205ENST00000600841 SULT1A1P50225 295 aa12.15□□□□□ -0.46
NOTCH3-205ENST00000600841 HBG1P69891 147 aa12.15□□□□□ -0.46
NOTCH3-205ENST00000600841 HBG2P69892 147 aa12.15□□□□□ -0.46
NOTCH3-205ENST00000600841 IGFL4Q6B9Z1 124 aa12.15□□□□□ -0.46
NOTCH3-205ENST00000600841 ZNF705AQ6ZN79 300 aaPredicted RBP12.15□□□□□ -0.46
NOTCH3-205ENST00000600841 LINC00305Q7Z4B0 112 aa12.15□□□□□ -0.46
NOTCH3-205ENST00000600841 RNF182Q8N6D2 247 aa12.15□□□□□ -0.46
NOTCH3-205ENST00000600841 SLC35B3Q9H1N7 401 aa12.15□□□□□ -0.46
NOTCH3-205ENST00000600841 A0A087X0K7 114 aa12.14□□□□□ -0.47
NOTCH3-205ENST00000600841 IGSF23A1L1A6 192 aa12.14□□□□□ -0.47
NOTCH3-205ENST00000600841 HLA-DMBP28068 263 aa12.14□□□□□ -0.47
NOTCH3-205ENST00000600841 TMEM252Q8N6L7 170 aa12.14□□□□□ -0.47
NOTCH3-205ENST00000600841 ZNF738Q8NE65 137 aa12.14□□□□□ -0.47
NOTCH3-205ENST00000600841 LRRC20Q8TCA0 184 aa12.14□□□□□ -0.47
NOTCH3-205ENST00000600841 C2CD4CQ8TF44 421 aa12.14□□□□□ -0.47
NOTCH3-205ENST00000600841 NEU1Q99519 415 aa12.14□□□□□ -0.47
NOTCH3-205ENST00000600841 IGHV3OR16-12A0A075B7B8 117 aa12.13□□□□□ -0.47
NOTCH3-205ENST00000600841 UBE2L5PA0A1B0GUS4 154 aa12.13□□□□□ -0.47
NOTCH3-205ENST00000600841 ZNF705FA8MVS1 300 aaPredicted RBP12.13□□□□□ -0.47
NOTCH3-205ENST00000600841 C11orf94C9JXX5 98 aa12.13□□□□□ -0.47
NOTCH3-205ENST00000600841 DUSP14O95147 198 aaKnown RBP12.13□□□□□ -0.47
NOTCH3-205ENST00000600841 ZNF705DP0CH99 300 aaPredicted RBP12.13□□□□□ -0.47
NOTCH3-205ENST00000600841 ZNF705BP0CI00 300 aaPredicted RBP12.13□□□□□ -0.47
NOTCH3-205ENST00000600841 VWC2Q2TAL6 325 aa12.13□□□□□ -0.47
NOTCH3-205ENST00000600841 C10orf113Q5VZT2 155 aa12.13□□□□□ -0.47
NOTCH3-205ENST00000600841 Q6ZRG5 221 aa12.13□□□□□ -0.47
NOTCH3-205ENST00000600841 WDR83OSQ9Y284 106 aa12.13□□□□□ -0.47
NOTCH3-205ENST00000600841 GOLT1BQ9Y3E0 138 aa12.13□□□□□ -0.47
NOTCH3-205ENST00000600841 SMIM9A6NGZ8 99 aa12.12□□□□□ -0.47
NOTCH3-205ENST00000600841 A8MTW9 85 aa12.12□□□□□ -0.47
NOTCH3-205ENST00000600841 SIX6O95475 246 aa12.12□□□□□ -0.47
NOTCH3-205ENST00000600841 CNN1P51911 297 aaKnown RBP12.12□□□□□ -0.47
NOTCH3-205ENST00000600841 BAXQ07812 192 aa12.12□□□□□ -0.47
NOTCH3-205ENST00000600841 TMEM37Q8WXS4 190 aa12.12□□□□□ -0.47
NOTCH3-205ENST00000600841 MARVELD1Q9BSK0 173 aa12.12□□□□□ -0.47
NOTCH3-205ENST00000600841 TMEM189A5PLL7 270 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms