RNA–Protein interactions for RNA: ENST00000600297.1

SLC27A1-209, Transcript of solute carrier family 27 member 1, humanhuman

TSL 2

Gene SLC27A1, Length 1,163 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1-209ENST00000600297 ARV1Q9H2C2 271 aa17.05■□□□□ 0.32
SLC27A1-209ENST00000600297 ELOA3CA0A087WX78 387 aaPredicted RBP17.04■□□□□ 0.32
SLC27A1-209ENST00000600297 MPDU1O75352 247 aa17.04■□□□□ 0.32
SLC27A1-209ENST00000600297 EWSR1Q01844 656 aaKnown RBP eCLIP17.04■□□□□ 0.32
SLC27A1-209ENST00000600297 NHLH2Q02577 135 aa17.04■□□□□ 0.32
SLC27A1-209ENST00000600297 DEFB135Q30KP9 77 aa17.04■□□□□ 0.32
SLC27A1-209ENST00000600297 TMEM41BQ5BJD5 291 aa17.04■□□□□ 0.32
SLC27A1-209ENST00000600297 Q6ZRG5 221 aa17.04■□□□□ 0.32
SLC27A1-209ENST00000600297 TRPT1Q86TN4 253 aaKnown RBP17.04■□□□□ 0.32
SLC27A1-209ENST00000600297 SCRT1Q9BWW7 348 aa17.04■□□□□ 0.32
SLC27A1-209ENST00000600297 SOCS3O14543 225 aa17.03■□□□□ 0.32
SLC27A1-209ENST00000600297 SPP1P10451 314 aa17.03■□□□□ 0.32
SLC27A1-209ENST00000600297 MORN3Q6PF18 240 aaPredicted RBP17.03■□□□□ 0.32
SLC27A1-209ENST00000600297 PATE2Q6UY27 113 aa17.03■□□□□ 0.32
SLC27A1-209ENST00000600297 OR5C1Q8NGR4 320 aa17.03■□□□□ 0.32
SLC27A1-209ENST00000600297 GATAD1Q8WUU5 269 aa17.03■□□□□ 0.32
SLC27A1-209ENST00000600297 RSG1Q9BU20 258 aa17.03■□□□□ 0.32
SLC27A1-209ENST00000600297 RNF126Q9BV68 326 aa17.03■□□□□ 0.32
SLC27A1-209ENST00000600297 UBE2L5PA0A1B0GUS4 154 aa17.02■□□□□ 0.32
SLC27A1-209ENST00000600297 RPL29P47914 159 aaKnown RBP17.02■□□□□ 0.32
SLC27A1-209ENST00000600297 PRR20EP86478 221 aa17.02■□□□□ 0.32
SLC27A1-209ENST00000600297 PRR20CP86479 221 aa17.02■□□□□ 0.32
SLC27A1-209ENST00000600297 PRR20DP86480 221 aa17.02■□□□□ 0.32
SLC27A1-209ENST00000600297 PRR20BP86481 221 aa17.02■□□□□ 0.32
SLC27A1-209ENST00000600297 PRR20AP86496 221 aa17.02■□□□□ 0.32
SLC27A1-209ENST00000600297 RGS21Q2M5E4 152 aa17.02■□□□□ 0.32
SLC27A1-209ENST00000600297 ACTL10Q5JWF8 245 aa17.02■□□□□ 0.32
SLC27A1-209ENST00000600297 UHRF2Q96PU4 802 aa17.02■□□□□ 0.32
SLC27A1-209ENST00000600297 KNCNA6PVL3 124 aa17.01■□□□□ 0.31
SLC27A1-209ENST00000600297 COX7A2P2O60397 106 aa17.01■□□□□ 0.31
SLC27A1-209ENST00000600297 LINC00305Q7Z4B0 112 aa17.01■□□□□ 0.31
SLC27A1-209ENST00000600297 OR1L4Q8NGR5 311 aa17.01■□□□□ 0.31
SLC27A1-209ENST00000600297 C16orf92Q96LL3 132 aa17.01■□□□□ 0.31
SLC27A1-209ENST00000600297 MED28Q9H204 178 aa17.01■□□□□ 0.31
SLC27A1-209ENST00000600297 DNAJC4Q9NNZ3 241 aa17.01■□□□□ 0.31
SLC27A1-209ENST00000600297 TENM2Q9NT68 2774 aa17.01■□□□□ 0.31
SLC27A1-209ENST00000600297 CA1P00915 261 aaPredicted RBP17■□□□□ 0.31
SLC27A1-209ENST00000600297 ATF4P18848 351 aaPredicted RBP17■□□□□ 0.31
SLC27A1-209ENST00000600297 FGF7P21781 194 aa17■□□□□ 0.31
SLC27A1-209ENST00000600297 OPCMLQ14982 345 aa17■□□□□ 0.31
SLC27A1-209ENST00000600297 C10orf113Q5VZT2 155 aa17■□□□□ 0.31
SLC27A1-209ENST00000600297 SPATA31B1PQ5VZV4 182 aa17■□□□□ 0.31
SLC27A1-209ENST00000600297 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17■□□□□ 0.31
SLC27A1-209ENST00000600297 IL17DQ8TAD2 202 aa17■□□□□ 0.31
SLC27A1-209ENST00000600297 LINC00052Q96N35 136 aa17■□□□□ 0.31
SLC27A1-209ENST00000600297 PFDN5Q99471 154 aa17■□□□□ 0.31
SLC27A1-209ENST00000600297 CXCL3P19876 107 aa16.99■□□□□ 0.31
SLC27A1-209ENST00000600297 NUTF2P61970 127 aaKnown RBP16.99■□□□□ 0.31
SLC27A1-209ENST00000600297 MIC13Q5XKP0 118 aa16.99■□□□□ 0.31
SLC27A1-209ENST00000600297 TMEM37Q8WXS4 190 aa16.99■□□□□ 0.31
SLC27A1-209ENST00000600297 DYNC2H1Q8NCM8 4307 aaKnown RBP16.99■□□□□ 0.31
SLC27A1-209ENST00000600297 LCE6AA0A183 80 aa16.98■□□□□ 0.31
SLC27A1-209ENST00000600297 H3BMM0 161 aa16.98■□□□□ 0.31
SLC27A1-209ENST00000600297 HLA-DRB4P13762 266 aa16.98■□□□□ 0.31
SLC27A1-209ENST00000600297 B2MP61769 119 aa16.98■□□□□ 0.31
SLC27A1-209ENST00000600297 FOXI2Q6ZQN5 318 aa16.98■□□□□ 0.31
SLC27A1-209ENST00000600297 ASB13Q8WXK3 278 aa16.98■□□□□ 0.31
SLC27A1-209ENST00000600297 C17orf77Q96MU5 243 aa16.98■□□□□ 0.31
SLC27A1-209ENST00000600297 SAV1Q9H4B6 383 aaPredicted RBP16.98■□□□□ 0.31
SLC27A1-209ENST00000600297 RPRMQ9NS64 109 aa16.98■□□□□ 0.31
SLC27A1-209ENST00000600297 SLC39A9Q9NUM3 307 aa16.98■□□□□ 0.31
SLC27A1-209ENST00000600297 HLA-DRB4X5D2U9 266 aa16.98■□□□□ 0.31
SLC27A1-209ENST00000600297 A0A087X0K7 114 aa16.97■□□□□ 0.31
SLC27A1-209ENST00000600297 BPIFA4PQ86YQ2 179 aa16.97■□□□□ 0.31
SLC27A1-209ENST00000600297 THAP6Q8TBB0 222 aa16.97■□□□□ 0.31
SLC27A1-209ENST00000600297 CLUHP3Q96NS8 147 aa16.97■□□□□ 0.31
SLC27A1-209ENST00000600297 NPCDR1Q9BY65 106 aa16.97■□□□□ 0.31
SLC27A1-209ENST00000600297 MBD2Q9UBB5 411 aa16.97■□□□□ 0.31
SLC27A1-209ENST00000600297 HSPB11Q9Y547 144 aa16.97■□□□□ 0.31
SLC27A1-209ENST00000600297 RPL12P30050 165 aaKnown RBP16.96■□□□□ 0.31
SLC27A1-209ENST00000600297 FCN2Q15485 313 aa16.96■□□□□ 0.31
SLC27A1-209ENST00000600297 OR11H7Q8NGC8 314 aa16.96■□□□□ 0.31
SLC27A1-209ENST00000600297 C1QTNF4Q9BXJ3 329 aa16.96■□□□□ 0.31
SLC27A1-209ENST00000600297 PXMP4Q9Y6I8 212 aa16.96■□□□□ 0.31
SLC27A1-209ENST00000600297 MRPS12O15235 138 aaKnown RBP16.95■□□□□ 0.3
SLC27A1-209ENST00000600297 CLINT1Q14677 625 aa16.95■□□□□ 0.3
SLC27A1-209ENST00000600297 OXA1LQ15070 435 aa16.95■□□□□ 0.3
SLC27A1-209ENST00000600297 RARRES2Q99969 163 aa16.95■□□□□ 0.3
SLC27A1-209ENST00000600297 WDR61Q9GZS3 305 aaKnown RBP16.95■□□□□ 0.3
SLC27A1-209ENST00000600297 KCNIP2Q9NS61 270 aa16.95■□□□□ 0.3
SLC27A1-209ENST00000600297 GIG44P09565 113 aaPredicted RBP16.94■□□□□ 0.3
SLC27A1-209ENST00000600297 CXCL2P19875 107 aa16.94■□□□□ 0.3
SLC27A1-209ENST00000600297 FGL1Q08830 312 aa16.94■□□□□ 0.3
SLC27A1-209ENST00000600297 EBLN2Q6P2I7 272 aa16.94■□□□□ 0.3
SLC27A1-209ENST00000600297 ZNF709Q8N972 641 aa16.94■□□□□ 0.3
SLC27A1-209ENST00000600297 ATP5SQ99766 215 aa16.94■□□□□ 0.3
SLC27A1-209ENST00000600297 CSMD3Q7Z407 3707 aa16.93■□□□□ 0.3
SLC27A1-209ENST00000600297 OR11H2Q8NH07 326 aa16.93■□□□□ 0.3
SLC27A1-209ENST00000600297 LRRC20Q8TCA0 184 aa16.93■□□□□ 0.3
SLC27A1-209ENST00000600297 C17orf112F2Z3M2 114 aa16.92■□□□□ 0.3
SLC27A1-209ENST00000600297 C4BPBP20851 252 aa16.92■□□□□ 0.3
SLC27A1-209ENST00000600297 GDF5OSQ5U4N7 250 aa16.92■□□□□ 0.3
SLC27A1-209ENST00000600297 LCN15Q6UWW0 184 aa16.92■□□□□ 0.3
SLC27A1-209ENST00000600297 STARD9Q9P2P6 4700 aa16.92■□□□□ 0.3
SLC27A1-209ENST00000600297 TRAV8-2A0A0B4J237 113 aa16.91■□□□□ 0.3
SLC27A1-209ENST00000600297 A0A0J9YWU9 116 aa16.91■□□□□ 0.3
SLC27A1-209ENST00000600297 A0A0J9YX75 114 aa16.91■□□□□ 0.3
SLC27A1-209ENST00000600297 GIPP09681 153 aaPredicted RBP16.91■□□□□ 0.3
SLC27A1-209ENST00000600297 C20orf173Q96LM9 149 aa16.91■□□□□ 0.3
SLC27A1-209ENST00000600297 SLC50A1Q9BRV3 221 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms