RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 SCGB1C1Q8TD33 95 aa15.11■□□□□ 0.01
PNKP-211ENST00000598020 GATAD1Q8WUU5 269 aa15.11■□□□□ 0.01
PNKP-211ENST00000598020 SLC25A22Q9H936 323 aa15.11■□□□□ 0.01
PNKP-211ENST00000598020 MAP6D1Q9H9H5 199 aa15.11■□□□□ 0.01
PNKP-211ENST00000598020 RPL7P18124 248 aaKnown RBP15.1■□□□□ 0.01
PNKP-211ENST00000598020 ZNF266Q14584 549 aa15.1■□□□□ 0.01
PNKP-211ENST00000598020 LEMD1Q68G75 181 aa15.1■□□□□ 0.01
PNKP-211ENST00000598020 SRD5A3Q9H8P0 318 aa15.1■□□□□ 0.01
PNKP-211ENST00000598020 UBQLN2Q9UHD9 624 aa15.1■□□□□ 0.01
PNKP-211ENST00000598020 SAMD13Q5VXD3 122 aa15.09■□□□□ 0.01
PNKP-211ENST00000598020 FAM24BQ8N5W8 94 aa15.09■□□□□ 0.01
PNKP-211ENST00000598020 CITED4Q96RK1 184 aa15.09■□□□□ 0.01
PNKP-211ENST00000598020 SMLR1H3BR10 107 aa15.08■□□□□ 0
PNKP-211ENST00000598020 SOCS3O14543 225 aa15.08■□□□□ 0
PNKP-211ENST00000598020 MEOX2P50222 304 aa15.08■□□□□ 0
PNKP-211ENST00000598020 ST6GAL2Q96JF0 529 aa15.08■□□□□ 0
PNKP-211ENST00000598020 C17orf77Q96MU5 243 aa15.08■□□□□ 0
PNKP-211ENST00000598020 RBMY1BA6NDE4 496 aaKnown RBP15.07■□□□□ 0
PNKP-211ENST00000598020 RBMY1EA6NEQ0 496 aaKnown RBP15.07■□□□□ 0
PNKP-211ENST00000598020 HMSDA8MTL9 139 aa15.07■□□□□ 0
PNKP-211ENST00000598020 MRPS12O15235 138 aaKnown RBP15.07■□□□□ 0
PNKP-211ENST00000598020 RBMY1DP0C7P1 496 aaKnown RBP15.07■□□□□ 0
PNKP-211ENST00000598020 RSG1Q9BU20 258 aa15.07■□□□□ 0
PNKP-211ENST00000598020 TIMM9Q9Y5J7 89 aa15.07■□□□□ 0
PNKP-211ENST00000598020 A0A087X0K7 114 aa15.06■□□□□ 0
PNKP-211ENST00000598020 ARPC5O15511 151 aa15.06■□□□□ 0
PNKP-211ENST00000598020 DEFB131AP59861 70 aa15.06■□□□□ 0
PNKP-211ENST00000598020 SNRPD3P62318 126 aaKnown RBP15.06■□□□□ 0
PNKP-211ENST00000598020 MORN5Q5VZ52 161 aa15.06■□□□□ 0
PNKP-211ENST00000598020 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.06■□□□□ 0
PNKP-211ENST00000598020 APRG1Q8IVJ8 170 aa15.06■□□□□ 0
PNKP-211ENST00000598020 MFFQ9GZY8 342 aa15.06■□□□□ 0
PNKP-211ENST00000598020 ISLRO14498 428 aa15.05■□□□□ -0
PNKP-211ENST00000598020 TAAR5O14804 337 aa15.05■□□□□ -0
PNKP-211ENST00000598020 ZNF688P0C7X2 276 aa15.05■□□□□ -0
PNKP-211ENST00000598020 NHLRC4P0CG21 123 aaPredicted RBP15.05■□□□□ -0
PNKP-211ENST00000598020 ID1P41134 155 aa15.05■□□□□ -0
PNKP-211ENST00000598020 PSMB3P49720 205 aa15.05■□□□□ -0
PNKP-211ENST00000598020 ZNF345Q14585 488 aa15.05■□□□□ -0
PNKP-211ENST00000598020 GCSAMLQ5JQS6 135 aa15.05■□□□□ -0
PNKP-211ENST00000598020 BPIFA4PQ86YQ2 179 aa15.05■□□□□ -0
PNKP-211ENST00000598020 SBSPONQ8IVN8 264 aa15.05■□□□□ -0
PNKP-211ENST00000598020 TCTE3Q8IZS6 198 aa15.05■□□□□ -0
PNKP-211ENST00000598020 OR11H4Q8NGC9 324 aa15.05■□□□□ -0
PNKP-211ENST00000598020 ATF4P18848 351 aaPredicted RBP15.04■□□□□ -0
PNKP-211ENST00000598020 HAGHQ16775 308 aa15.04■□□□□ -0
PNKP-211ENST00000598020 LOC102724200A0A096LPH7 203 aaPredicted RBP15.03■□□□□ -0
PNKP-211ENST00000598020 ZNF124Q15973 351 aa15.03■□□□□ -0
PNKP-211ENST00000598020 PSMG4Q5JS54 123 aa15.03■□□□□ -0
PNKP-211ENST00000598020 FFAR4Q5NUL3 377 aa15.03■□□□□ -0
PNKP-211ENST00000598020 PSMG3Q9BT73 122 aaPredicted RBP15.03■□□□□ -0
PNKP-211ENST00000598020 MRPL32Q9BYC8 188 aaKnown RBP15.03■□□□□ -0
PNKP-211ENST00000598020 DNAH9Q9NYC9 4486 aa15.02■□□□□ -0
PNKP-211ENST00000598020 BORCS7-ASMTA0A0B4J1R7 106 aa15.02■□□□□ -0
PNKP-211ENST00000598020 TRAV5A0A0B4J249 113 aa15.02■□□□□ -0
PNKP-211ENST00000598020 CXCL2P19875 107 aa15.02■□□□□ -0
PNKP-211ENST00000598020 FAM78BQ5VT40 261 aa15.02■□□□□ -0
PNKP-211ENST00000598020 KCNRGQ8N5I3 272 aa15.02■□□□□ -0
PNKP-211ENST00000598020 OR2G3Q8NGZ4 309 aa15.02■□□□□ -0
PNKP-211ENST00000598020 ASCL2Q99929 193 aa15.02■□□□□ -0
PNKP-211ENST00000598020 TMEM14CQ9P0S9 112 aa15.02■□□□□ -0
PNKP-211ENST00000598020 TGP01266 2768 aa15.02□□□□□ -0.01
PNKP-211ENST00000598020 KIR2DL5BA0A0G2JN68 375 aa15.01□□□□□ -0.01
PNKP-211ENST00000598020 KIR2DL5BA0A0G2JPC4 375 aa15.01□□□□□ -0.01
PNKP-211ENST00000598020 IGLC2P0DOY2 106 aa15.01□□□□□ -0.01
PNKP-211ENST00000598020 RPL7L1Q6DKI1 246 aaKnown RBP15.01□□□□□ -0.01
PNKP-211ENST00000598020 KIR2DL5AQ8N109 375 aa15.01□□□□□ -0.01
PNKP-211ENST00000598020 HSD17B11Q8NBQ5 300 aa15.01□□□□□ -0.01
PNKP-211ENST00000598020 KIR2DL5BQ8NHK3 375 aa15.01□□□□□ -0.01
PNKP-211ENST00000598020 C16orf92Q96LL3 132 aa15.01□□□□□ -0.01
PNKP-211ENST00000598020 TM2D3Q9BRN9 247 aa15.01□□□□□ -0.01
PNKP-211ENST00000598020 HRH4Q9H3N8 390 aa15.01□□□□□ -0.01
PNKP-211ENST00000598020 FUT9Q9Y231 359 aa15.01□□□□□ -0.01
PNKP-211ENST00000598020 hCG_2014768A0A024R1R8 64 aa15□□□□□ -0.01
PNKP-211ENST00000598020 A0A0D9SG52 128 aa15□□□□□ -0.01
PNKP-211ENST00000598020 JTBO76095 146 aa15□□□□□ -0.01
PNKP-211ENST00000598020 ATP6V0CP27449 155 aa15□□□□□ -0.01
PNKP-211ENST00000598020 SERF2P84101 59 aa15□□□□□ -0.01
PNKP-211ENST00000598020 GNPNAT1Q96EK6 184 aaPredicted RBP15□□□□□ -0.01
PNKP-211ENST00000598020 FAM167A-AS1Q96KT0 104 aa15□□□□□ -0.01
PNKP-211ENST00000598020 CYTL1Q9NRR1 136 aa15□□□□□ -0.01
PNKP-211ENST00000598020 RFNGQ9Y644 331 aa15□□□□□ -0.01
PNKP-211ENST00000598020 AGRNO00468 2067 aa15□□□□□ -0.01
PNKP-211ENST00000598020 TRAV8-2A0A0B4J237 113 aa14.99□□□□□ -0.01
PNKP-211ENST00000598020 M6PRP20645 277 aa14.99□□□□□ -0.01
PNKP-211ENST00000598020 GUK1Q16774 197 aa14.99□□□□□ -0.01
PNKP-211ENST00000598020 ACOT6Q3I5F7 207 aaPredicted RBP14.99□□□□□ -0.01
PNKP-211ENST00000598020 SPATA31B1PQ5VZV4 182 aa14.99□□□□□ -0.01
PNKP-211ENST00000598020 LCN15Q6UWW0 184 aa14.99□□□□□ -0.01
PNKP-211ENST00000598020 MIR17HGQ75NE6 70 aa14.99□□□□□ -0.01
PNKP-211ENST00000598020 SLC25A2Q9BXI2 301 aa14.99□□□□□ -0.01
PNKP-211ENST00000598020 APOC4P55056 127 aa14.98□□□□□ -0.01
PNKP-211ENST00000598020 RHOBP62745 196 aa14.98□□□□□ -0.01
PNKP-211ENST00000598020 AKAP14Q86UN6 197 aa14.98□□□□□ -0.01
PNKP-211ENST00000598020 LINC00052Q96N35 136 aa14.98□□□□□ -0.01
PNKP-211ENST00000598020 ARPC5LQ9BPX5 153 aa14.98□□□□□ -0.01
PNKP-211ENST00000598020 SLC50A1Q9BRV3 221 aa14.98□□□□□ -0.01
PNKP-211ENST00000598020 H3BQ15 152 aa14.97□□□□□ -0.01
PNKP-211ENST00000598020 UBE2CO00762 179 aa14.97□□□□□ -0.01
PNKP-211ENST00000598020 ZNF253O75346 499 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms