RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 TENM2Q9NT68 2774 aa12.24□□□□□ -0.45
SSBP4-204ENST00000597724 GIG44P09565 113 aaPredicted RBP12.24□□□□□ -0.45
SSBP4-204ENST00000597724 NHLH2Q02577 135 aa12.24□□□□□ -0.45
SSBP4-204ENST00000597724 SAMD13Q5VXD3 122 aa12.24□□□□□ -0.45
SSBP4-204ENST00000597724 MORN3Q6PF18 240 aaPredicted RBP12.24□□□□□ -0.45
SSBP4-204ENST00000597724 RNF126Q9BV68 326 aa12.24□□□□□ -0.45
SSBP4-204ENST00000597724 SLC25A31Q9H0C2 315 aa12.24□□□□□ -0.45
SSBP4-204ENST00000597724 ARV1Q9H2C2 271 aa12.24□□□□□ -0.45
SSBP4-204ENST00000597724 ALG5Q9Y673 324 aa12.24□□□□□ -0.45
SSBP4-204ENST00000597724 H3BMM0 161 aa12.23□□□□□ -0.45
SSBP4-204ENST00000597724 SPP1P10451 314 aa12.23□□□□□ -0.45
SSBP4-204ENST00000597724 PRR20EP86478 221 aa12.23□□□□□ -0.45
SSBP4-204ENST00000597724 PRR20CP86479 221 aa12.23□□□□□ -0.45
SSBP4-204ENST00000597724 PRR20DP86480 221 aa12.23□□□□□ -0.45
SSBP4-204ENST00000597724 PRR20BP86481 221 aa12.23□□□□□ -0.45
SSBP4-204ENST00000597724 PRR20AP86496 221 aa12.23□□□□□ -0.45
SSBP4-204ENST00000597724 EWSR1Q01844 656 aaKnown RBP eCLIP12.23□□□□□ -0.454e-7■■■■□ 23.9
SSBP4-204ENST00000597724 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.23□□□□□ -0.45
SSBP4-204ENST00000597724 CHAC2Q8WUX2 184 aa12.23□□□□□ -0.45
SSBP4-204ENST00000597724 LINC00052Q96N35 136 aa12.23□□□□□ -0.45
SSBP4-204ENST00000597724 KMT2CQ8NEZ4 4911 aaKnown RBP12.22□□□□□ -0.45
SSBP4-204ENST00000597724 CSMD3Q7Z407 3707 aa12.22□□□□□ -0.45
SSBP4-204ENST00000597724 ELOA3CA0A087WX78 387 aaPredicted RBP12.22□□□□□ -0.45
SSBP4-204ENST00000597724 UBE2L5PA0A1B0GUS4 154 aa12.22□□□□□ -0.45
SSBP4-204ENST00000597724 MPC2O95563 127 aa12.22□□□□□ -0.45
SSBP4-204ENST00000597724 HLA-DRB4P13762 266 aa12.22□□□□□ -0.45
SSBP4-204ENST00000597724 RPL7P18124 248 aaKnown RBP12.22□□□□□ -0.45
SSBP4-204ENST00000597724 RPL29P47914 159 aaKnown RBP12.22□□□□□ -0.45
SSBP4-204ENST00000597724 DEFB1P60022 68 aa12.22□□□□□ -0.45
SSBP4-204ENST00000597724 BAXQ07812 192 aa12.22□□□□□ -0.45
SSBP4-204ENST00000597724 TMEM41BQ5BJD5 291 aa12.22□□□□□ -0.45
SSBP4-204ENST00000597724 MIC13Q5XKP0 118 aa12.22□□□□□ -0.45
SSBP4-204ENST00000597724 LINC00305Q7Z4B0 112 aa12.22□□□□□ -0.45
SSBP4-204ENST00000597724 OR5C1Q8NGR4 320 aa12.22□□□□□ -0.45
SSBP4-204ENST00000597724 TMEM37Q8WXS4 190 aa12.22□□□□□ -0.45
SSBP4-204ENST00000597724 C16orf92Q96LL3 132 aa12.22□□□□□ -0.45
SSBP4-204ENST00000597724 RARRES2Q99969 163 aa12.22□□□□□ -0.45
SSBP4-204ENST00000597724 RNF24Q9Y225 148 aa12.22□□□□□ -0.45
SSBP4-204ENST00000597724 HLA-DRB4X5D2U9 266 aa12.22□□□□□ -0.45
SSBP4-204ENST00000597724 A0A0J9YWU9 116 aa12.21□□□□□ -0.45
SSBP4-204ENST00000597724 COX7A2P2O60397 106 aa12.21□□□□□ -0.45
SSBP4-204ENST00000597724 C4BPBP20851 252 aa12.21□□□□□ -0.45
SSBP4-204ENST00000597724 FGF7P21781 194 aa12.21□□□□□ -0.45
SSBP4-204ENST00000597724 GDF5OSQ5U4N7 250 aa12.21□□□□□ -0.45
SSBP4-204ENST00000597724 ZFAND6Q6FIF0 208 aa12.21□□□□□ -0.45
SSBP4-204ENST00000597724 FOXI2Q6ZQN5 318 aa12.21□□□□□ -0.45
SSBP4-204ENST00000597724 Q6ZRG5 221 aa12.21□□□□□ -0.45
SSBP4-204ENST00000597724 IL17DQ8TAD2 202 aa12.21□□□□□ -0.45
SSBP4-204ENST00000597724 SAV1Q9H4B6 383 aaPredicted RBP12.21□□□□□ -0.45
SSBP4-204ENST00000597724 DNAJC4Q9NNZ3 241 aa12.21□□□□□ -0.45
SSBP4-204ENST00000597724 MRPS12O15235 138 aaKnown RBP12.2□□□□□ -0.46
SSBP4-204ENST00000597724 PET100P0DJ07 73 aa12.2□□□□□ -0.46
SSBP4-204ENST00000597724 ATF4P18848 351 aaPredicted RBP12.2□□□□□ -0.46
SSBP4-204ENST00000597724 CXCL3P19876 107 aa12.2□□□□□ -0.46
SSBP4-204ENST00000597724 OPCMLQ14982 345 aa12.2□□□□□ -0.46
SSBP4-204ENST00000597724 C10orf113Q5VZT2 155 aa12.2□□□□□ -0.46
SSBP4-204ENST00000597724 OR11H2Q8NH07 326 aa12.2□□□□□ -0.46
SSBP4-204ENST00000597724 C20orf173Q96LM9 149 aa12.2□□□□□ -0.46
SSBP4-204ENST00000597724 RPRMQ9NS64 109 aa12.2□□□□□ -0.46
SSBP4-204ENST00000597724 A0A087X0K7 114 aa12.19□□□□□ -0.46
SSBP4-204ENST00000597724 MPDU1O75352 247 aa12.19□□□□□ -0.46
SSBP4-204ENST00000597724 NUTF2P61970 127 aaKnown RBP12.19□□□□□ -0.46
SSBP4-204ENST00000597724 SPATA31B1PQ5VZV4 182 aa12.19□□□□□ -0.46
SSBP4-204ENST00000597724 CSNK1G2-AS1Q8NCQ2 148 aa12.19□□□□□ -0.46
SSBP4-204ENST00000597724 CLUHP3Q96NS8 147 aa12.19□□□□□ -0.46
SSBP4-204ENST00000597724 SLC39A9Q9NUM3 307 aa12.19□□□□□ -0.46
SSBP4-204ENST00000597724 TRAV8-2A0A0B4J237 113 aa12.18□□□□□ -0.46
SSBP4-204ENST00000597724 A0A0J9YX75 114 aa12.18□□□□□ -0.46
SSBP4-204ENST00000597724 F6UB75 175 aa12.18□□□□□ -0.46
SSBP4-204ENST00000597724 B2MP61769 119 aa12.18□□□□□ -0.46
SSBP4-204ENST00000597724 FGL1Q08830 312 aa12.18□□□□□ -0.46
SSBP4-204ENST00000597724 CLINT1Q14677 625 aa12.18□□□□□ -0.46
SSBP4-204ENST00000597724 MORN5Q5VZ52 161 aa12.18□□□□□ -0.46
SSBP4-204ENST00000597724 BPIFA4PQ86YQ2 179 aa12.18□□□□□ -0.46
SSBP4-204ENST00000597724 OR1L4Q8NGR5 311 aa12.18□□□□□ -0.46
SSBP4-204ENST00000597724 PFDN5Q99471 154 aa12.18□□□□□ -0.46
SSBP4-204ENST00000597724 NPCDR1Q9BY65 106 aa12.18□□□□□ -0.46
SSBP4-204ENST00000597724 MED28Q9H204 178 aa12.18□□□□□ -0.46
SSBP4-204ENST00000597724 PXMP4Q9Y6I8 212 aa12.18□□□□□ -0.46
SSBP4-204ENST00000597724 IGKV3-20P01619 116 aa12.17□□□□□ -0.46
SSBP4-204ENST00000597724 FCN2Q15485 313 aa12.17□□□□□ -0.46
SSBP4-204ENST00000597724 IGFL4Q6B9Z1 124 aa12.17□□□□□ -0.46
SSBP4-204ENST00000597724 EBLN2Q6P2I7 272 aa12.17□□□□□ -0.46
SSBP4-204ENST00000597724 OR11H7Q8NGC8 314 aa12.17□□□□□ -0.46
SSBP4-204ENST00000597724 THAP6Q8TBB0 222 aa12.17□□□□□ -0.46
SSBP4-204ENST00000597724 C1QTNF4Q9BXJ3 329 aa12.17□□□□□ -0.46
SSBP4-204ENST00000597724 CLEC5AQ9NY25 188 aa12.17□□□□□ -0.46
SSBP4-204ENST00000597724 MBD2Q9UBB5 411 aa12.17□□□□□ -0.46
SSBP4-204ENST00000597724 HSPB11Q9Y547 144 aa12.17□□□□□ -0.46
SSBP4-204ENST00000597724 RPL12P30050 165 aaKnown RBP12.16□□□□□ -0.46
SSBP4-204ENST00000597724 RGS21Q2M5E4 152 aa12.16□□□□□ -0.46
SSBP4-204ENST00000597724 FAM78BQ5VT40 261 aa12.16□□□□□ -0.46
SSBP4-204ENST00000597724 RNF182Q8N6D2 247 aa12.16□□□□□ -0.46
SSBP4-204ENST00000597724 OR4B1Q8NGF8 309 aa12.16□□□□□ -0.46
SSBP4-204ENST00000597724 WDR61Q9GZS3 305 aaKnown RBP12.16□□□□□ -0.46
SSBP4-204ENST00000597724 STARD9Q9P2P6 4700 aa12.15□□□□□ -0.46
SSBP4-204ENST00000597724 ZNF705EA8MWA4 302 aaPredicted RBP12.15□□□□□ -0.46
SSBP4-204ENST00000597724 LRRC20Q8TCA0 184 aa12.15□□□□□ -0.46
SSBP4-204ENST00000597724 C11orf68Q9H3H3 251 aaKnown RBP12.15□□□□□ -0.46
SSBP4-204ENST00000597724 XCL2Q9UBD3 114 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms