RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 FAM213BQ8TBF2 198 aa9.18□□□□□ -0.94
SHKBP1-213ENST00000597325 RNF141Q8WVD5 230 aa9.18□□□□□ -0.94
SHKBP1-213ENST00000597325 ACTR3CQ9C0K3 210 aaPredicted RBP9.18□□□□□ -0.94
SHKBP1-213ENST00000597325 VSIRQ9H7M9 311 aa9.18□□□□□ -0.94
SHKBP1-213ENST00000597325 SLC25A22Q9H936 323 aa9.18□□□□□ -0.94
SHKBP1-213ENST00000597325 A8MWP6 167 aa9.17□□□□□ -0.94
SHKBP1-213ENST00000597325 K7EMT4 169 aa9.17□□□□□ -0.94
SHKBP1-213ENST00000597325 SULT1A2P50226 295 aa9.17□□□□□ -0.94
SHKBP1-213ENST00000597325 TAS2R45P59539 299 aa9.17□□□□□ -0.94
SHKBP1-213ENST00000597325 ZNF680Q8NEM1 530 aa9.17□□□□□ -0.94
SHKBP1-213ENST00000597325 TMEM37Q8WXS4 190 aa9.17□□□□□ -0.94
SHKBP1-213ENST00000597325 GRAMD2BQ96HH9 432 aa9.17□□□□□ -0.94
SHKBP1-213ENST00000597325 ZNF414Q96IQ9 312 aa9.17□□□□□ -0.94
SHKBP1-213ENST00000597325 UHRF2Q96PU4 802 aa9.17□□□□□ -0.94
SHKBP1-213ENST00000597325 SLC25A39Q9BZJ4 359 aaPredicted RBP9.17□□□□□ -0.94
SHKBP1-213ENST00000597325 TMEM231Q9H6L2 316 aa9.17□□□□□ -0.94
SHKBP1-213ENST00000597325 RPRMQ9NS64 109 aa9.17□□□□□ -0.94
SHKBP1-213ENST00000597325 MRPL27Q9P0M9 148 aaKnown RBP9.17□□□□□ -0.94
SHKBP1-213ENST00000597325 FUT9Q9Y231 359 aa9.17□□□□□ -0.94
SHKBP1-213ENST00000597325 CTXND1A0A1B0GTU2 59 aa9.16□□□□□ -0.94
SHKBP1-213ENST00000597325 A0A1W2PS18 150 aa9.16□□□□□ -0.94
SHKBP1-213ENST00000597325 ZNF705EA8MWA4 302 aaPredicted RBP9.16□□□□□ -0.94
SHKBP1-213ENST00000597325 H3BRN7 92 aa9.16□□□□□ -0.94
SHKBP1-213ENST00000597325 OVOL1O14753 267 aa9.16□□□□□ -0.94
SHKBP1-213ENST00000597325 CRYBB3P26998 211 aa9.16□□□□□ -0.94
SHKBP1-213ENST00000597325 TM4SF20Q53R12 229 aa9.16□□□□□ -0.94
SHKBP1-213ENST00000597325 KHDC3LQ587J8 217 aa9.16□□□□□ -0.94
SHKBP1-213ENST00000597325 PATE2Q6UY27 113 aa9.16□□□□□ -0.94
SHKBP1-213ENST00000597325 ZNF767PQ75MW2 155 aa9.16□□□□□ -0.94
SHKBP1-213ENST00000597325 OR9G4Q8NGQ1 327 aa9.16□□□□□ -0.94
SHKBP1-213ENST00000597325 LRRC20Q8TCA0 184 aa9.16□□□□□ -0.94
SHKBP1-213ENST00000597325 DLX4Q92988 240 aaPredicted RBP9.16□□□□□ -0.94
SHKBP1-213ENST00000597325 MARC2Q969Z3 335 aa9.16□□□□□ -0.94
SHKBP1-213ENST00000597325 SHANK2-AS3Q9BTD1 123 aa9.16□□□□□ -0.94
SHKBP1-213ENST00000597325 ELOVL1Q9BW60 279 aa9.16□□□□□ -0.94
SHKBP1-213ENST00000597325 SCRT1Q9BWW7 348 aa9.16□□□□□ -0.94
SHKBP1-213ENST00000597325 SEPSECSQ9HD40 501 aaKnown RBP9.16□□□□□ -0.94
SHKBP1-213ENST00000597325 TECRQ9NZ01 308 aaKnown RBP9.16□□□□□ -0.94
SHKBP1-213ENST00000597325 KIAA1109Q2LD37 5005 aa9.15□□□□□ -0.94
SHKBP1-213ENST00000597325 IGHV3-49A0A0A0MS15 119 aa9.15□□□□□ -0.94
SHKBP1-213ENST00000597325 IGHV7-4-1A0A0J9YVY3 117 aa9.15□□□□□ -0.94
SHKBP1-213ENST00000597325 TMEM213A2RRL7 107 aa9.15□□□□□ -0.94
SHKBP1-213ENST00000597325 SEC14L6B5MCN3 397 aa9.15□□□□□ -0.94
SHKBP1-213ENST00000597325 TEX46H3BTG2 121 aa9.15□□□□□ -0.94
SHKBP1-213ENST00000597325 RPP25LQ8N5L8 163 aaKnown RBP9.15□□□□□ -0.94
SHKBP1-213ENST00000597325 RAB24Q969Q5 203 aa9.15□□□□□ -0.94
SHKBP1-213ENST00000597325 ALMS1Q8TCU4 4167 aa9.14□□□□□ -0.95
SHKBP1-213ENST00000597325 MAP1LC3B2A6NCE7 125 aa9.14□□□□□ -0.95
SHKBP1-213ENST00000597325 C2orf70A6NJV1 201 aa9.14□□□□□ -0.95
SHKBP1-213ENST00000597325 ZNF98A6NK75 572 aa9.14□□□□□ -0.95
SHKBP1-213ENST00000597325 OR7C2O60412 319 aa9.14□□□□□ -0.95
SHKBP1-213ENST00000597325 H2AFB1P0C5Y9 115 aa9.14□□□□□ -0.95
SHKBP1-213ENST00000597325 C8orf88P0DMB2 117 aa9.14□□□□□ -0.95
SHKBP1-213ENST00000597325 FHITP49789 147 aa9.14□□□□□ -0.95
SHKBP1-213ENST00000597325 RAB14P61106 215 aa9.14□□□□□ -0.95
SHKBP1-213ENST00000597325 BLOC1S1P78537 153 aa9.14□□□□□ -0.95
SHKBP1-213ENST00000597325 EGFEM1PQ0D2K5 195 aa9.14□□□□□ -0.95
SHKBP1-213ENST00000597325 C1orf194Q5T5A4 169 aa9.14□□□□□ -0.95
SHKBP1-213ENST00000597325 SPATA31B1PQ5VZV4 182 aa9.14□□□□□ -0.95
SHKBP1-213ENST00000597325 MIR17HGQ75NE6 70 aa9.14□□□□□ -0.95
SHKBP1-213ENST00000597325 IQCF2Q8IXL9 164 aa9.14□□□□□ -0.95
SHKBP1-213ENST00000597325 OR8I2Q8N0Y5 310 aa9.14□□□□□ -0.95
SHKBP1-213ENST00000597325 STXBP6Q8NFX7 210 aa9.14□□□□□ -0.95
SHKBP1-213ENST00000597325 DYNLRB2Q8TF09 96 aa9.14□□□□□ -0.95
SHKBP1-213ENST00000597325 GPR82Q96P67 336 aa9.14□□□□□ -0.95
SHKBP1-213ENST00000597325 MAP1LC3BQ9GZQ8 125 aa9.14□□□□□ -0.95
SHKBP1-213ENST00000597325 PLA2G2EQ9NZK7 142 aa9.14□□□□□ -0.95
SHKBP1-213ENST00000597325 SMPXQ9UHP9 88 aa9.14□□□□□ -0.95
SHKBP1-213ENST00000597325 IGHV3OR16-13A0A075B7E8 117 aa9.13□□□□□ -0.95
SHKBP1-213ENST00000597325 IGHV3-74A0A0B4J1X5 117 aa9.13□□□□□ -0.95
SHKBP1-213ENST00000597325 IGHV3-66A0A0C4DH42 116 aa9.13□□□□□ -0.95
SHKBP1-213ENST00000597325 RBMY1BA6NDE4 496 aaKnown RBP9.13□□□□□ -0.95
SHKBP1-213ENST00000597325 RBMY1EA6NEQ0 496 aaKnown RBP9.13□□□□□ -0.95
SHKBP1-213ENST00000597325 HMGB3O15347 200 aaKnown RBP9.13□□□□□ -0.95
SHKBP1-213ENST00000597325 RBMY1DP0C7P1 496 aaKnown RBP9.13□□□□□ -0.95
SHKBP1-213ENST00000597325 RPL7P18124 248 aaKnown RBP9.13□□□□□ -0.95
SHKBP1-213ENST00000597325 GALR1P47211 349 aa9.13□□□□□ -0.95
SHKBP1-213ENST00000597325 IFITM2Q01629 132 aa9.13□□□□□ -0.95
SHKBP1-213ENST00000597325 MORN5Q5VZ52 161 aa9.13□□□□□ -0.95
SHKBP1-213ENST00000597325 LEMD1Q68G75 181 aa9.13□□□□□ -0.95
SHKBP1-213ENST00000597325 LCN15Q6UWW0 184 aa9.13□□□□□ -0.95
SHKBP1-213ENST00000597325 PQLC2Q6ZP29 291 aa9.13□□□□□ -0.95
SHKBP1-213ENST00000597325 BPIFA4PQ86YQ2 179 aa9.13□□□□□ -0.95
SHKBP1-213ENST00000597325 LINC00482Q8N8I6 264 aa9.13□□□□□ -0.95
SHKBP1-213ENST00000597325 SFT2D1Q8WV19 159 aa9.13□□□□□ -0.95
SHKBP1-213ENST00000597325 SAT2Q96F10 170 aaPredicted RBP9.13□□□□□ -0.95
SHKBP1-213ENST00000597325 RHPN1-AS1Q9BWJ2 59 aa9.13□□□□□ -0.95
SHKBP1-213ENST00000597325 SLC25A2Q9BXI2 301 aa9.13□□□□□ -0.95
SHKBP1-213ENST00000597325 U3KQE9 123 aa9.13□□□□□ -0.95
SHKBP1-213ENST00000597325 TRAV5A0A0B4J249 113 aa9.12□□□□□ -0.95
SHKBP1-213ENST00000597325 CHEK1O14757 476 aa9.12□□□□□ -0.95
SHKBP1-213ENST00000597325 BUB3O43684 328 aa9.12□□□□□ -0.95
SHKBP1-213ENST00000597325 CXorf1O96002 111 aa9.12□□□□□ -0.95
SHKBP1-213ENST00000597325 HBE1P02100 147 aa9.12□□□□□ -0.95
SHKBP1-213ENST00000597325 APOHP02749 345 aaPredicted RBP9.12□□□□□ -0.95
SHKBP1-213ENST00000597325 STAG3L2P0CL84 134 aa9.12□□□□□ -0.95
SHKBP1-213ENST00000597325 STAG3L3P0CL85 134 aa9.12□□□□□ -0.95
SHKBP1-213ENST00000597325 FOLR2P14207 255 aa9.12□□□□□ -0.95
SHKBP1-213ENST00000597325 ATF4P18848 351 aaPredicted RBP9.12□□□□□ -0.95
SHKBP1-213ENST00000597325 CBLN1P23435 193 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms