RNA–Protein interactions for RNA: ENST00000595874.1

SHKBP1-210, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 203 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-210ENST00000595874 SLC25A39Q9BZJ4 359 aaPredicted RBP7.41□□□□□ -1.22
SHKBP1-210ENST00000595874 MGAT4CQ9UBM8 478 aa7.41□□□□□ -1.22
SHKBP1-210ENST00000595874 HIGD1AQ9Y241 93 aa7.41□□□□□ -1.22
SHKBP1-210ENST00000595874 KMT2AQ03164 3969 aa7.41□□□□□ -1.22
SHKBP1-210ENST00000595874 DNAH10Q8IVF4 4471 aa7.4□□□□□ -1.22
SHKBP1-210ENST00000595874 DNAH6Q9C0G6 4158 aa7.4□□□□□ -1.22
SHKBP1-210ENST00000595874 VPS13DQ5THJ4 4388 aa7.4□□□□□ -1.22
SHKBP1-210ENST00000595874 TRAV12-2A0A075B6T6 113 aa7.4□□□□□ -1.22
SHKBP1-210ENST00000595874 DEFB131BA0A096LNP1 70 aa7.4□□□□□ -1.22
SHKBP1-210ENST00000595874 TRAV8-2A0A0B4J237 113 aa7.4□□□□□ -1.22
SHKBP1-210ENST00000595874 TRAV10A0A0B4J240 114 aa7.4□□□□□ -1.22
SHKBP1-210ENST00000595874 PIGBOS1A0A0B4J2F0 54 aa7.4□□□□□ -1.22
SHKBP1-210ENST00000595874 A0A0J9YX75 114 aa7.4□□□□□ -1.22
SHKBP1-210ENST00000595874 FAM24AA6NFZ4 105 aa7.4□□□□□ -1.22
SHKBP1-210ENST00000595874 ZNF705GA8MUZ8 300 aaPredicted RBP7.4□□□□□ -1.22
SHKBP1-210ENST00000595874 H3BRN7 92 aa7.4□□□□□ -1.22
SHKBP1-210ENST00000595874 MBPP02686 304 aaPredicted RBP7.4□□□□□ -1.22
SHKBP1-210ENST00000595874 TCRBP04435 133 aa7.4□□□□□ -1.22
SHKBP1-210ENST00000595874 S100A10P60903 97 aa7.4□□□□□ -1.22
SHKBP1-210ENST00000595874 RAP2BP61225 183 aa7.4□□□□□ -1.22
SHKBP1-210ENST00000595874 PSG9Q00887 426 aa7.4□□□□□ -1.22
SHKBP1-210ENST00000595874 TMEM41BQ5BJD5 291 aa7.4□□□□□ -1.22
SHKBP1-210ENST00000595874 C1orf194Q5T5A4 169 aa7.4□□□□□ -1.22
SHKBP1-210ENST00000595874 TMEM144Q7Z5S9 345 aa7.4□□□□□ -1.22
SHKBP1-210ENST00000595874 ZNF709Q8N972 641 aa7.4□□□□□ -1.22
SHKBP1-210ENST00000595874 LRRC20Q8TCA0 184 aa7.4□□□□□ -1.22
SHKBP1-210ENST00000595874 SMIM8Q96KF7 97 aa7.4□□□□□ -1.22
SHKBP1-210ENST00000595874 C1QTNF4Q9BXJ3 329 aa7.4□□□□□ -1.22
SHKBP1-210ENST00000595874 RPRMQ9NS64 109 aa7.4□□□□□ -1.22
SHKBP1-210ENST00000595874 NUDT15Q9NV35 164 aa7.4□□□□□ -1.22
SHKBP1-210ENST00000595874 M0R2N4 97 aa7.39□□□□□ -1.23
SHKBP1-210ENST00000595874 ISLRO14498 428 aa7.39□□□□□ -1.23
SHKBP1-210ENST00000595874 HYPMO75409 117 aa7.39□□□□□ -1.23
SHKBP1-210ENST00000595874 CST7O76096 145 aa7.39□□□□□ -1.23
SHKBP1-210ENST00000595874 RHOBP62745 196 aa7.39□□□□□ -1.23
SHKBP1-210ENST00000595874 DLK1P80370 383 aa7.39□□□□□ -1.23
SHKBP1-210ENST00000595874 HIST1H1AQ02539 215 aaPredicted RBP7.39□□□□□ -1.23
SHKBP1-210ENST00000595874 ZNF846Q147U1 533 aa7.39□□□□□ -1.23
SHKBP1-210ENST00000595874 FAM222AQ5U5X8 452 aa7.39□□□□□ -1.23
SHKBP1-210ENST00000595874 LGALS9CQ6DKI2 356 aa7.39□□□□□ -1.23
SHKBP1-210ENST00000595874 TMEM14EPQ6UXP3 125 aa7.39□□□□□ -1.23
SHKBP1-210ENST00000595874 PATE2Q6UY27 113 aa7.39□□□□□ -1.23
SHKBP1-210ENST00000595874 BAP18Q8IXM2 172 aa7.39□□□□□ -1.23
SHKBP1-210ENST00000595874 C1orf158Q8N1D5 194 aa7.39□□□□□ -1.23
SHKBP1-210ENST00000595874 OR10P1Q8NGE3 313 aa7.39□□□□□ -1.23
SHKBP1-210ENST00000595874 MITD1Q8WV92 249 aa7.39□□□□□ -1.23
SHKBP1-210ENST00000595874 DEDD2Q8WXF8 326 aa7.39□□□□□ -1.23
SHKBP1-210ENST00000595874 TMEM208Q9BTX3 173 aa7.39□□□□□ -1.23
SHKBP1-210ENST00000595874 PARD6GQ9BYG4 376 aaPredicted RBP7.39□□□□□ -1.23
SHKBP1-210ENST00000595874 TRAV5A0A0B4J249 113 aa7.38□□□□□ -1.23
SHKBP1-210ENST00000595874 LOC102723971A0A1B0GUV8 181 aa7.38□□□□□ -1.23
SHKBP1-210ENST00000595874 C7orf66A4D0T2 115 aa7.38□□□□□ -1.23
SHKBP1-210ENST00000595874 ZNF705FA8MVS1 300 aaPredicted RBP7.38□□□□□ -1.23
SHKBP1-210ENST00000595874 J3KRW8 73 aa7.38□□□□□ -1.23
SHKBP1-210ENST00000595874 K7EPK0 472 aa7.38□□□□□ -1.23
SHKBP1-210ENST00000595874 SIX6O95475 246 aa7.38□□□□□ -1.23
SHKBP1-210ENST00000595874 H2AFB2P0C5Z0 115 aa7.38□□□□□ -1.23
SHKBP1-210ENST00000595874 HTN1P15515 57 aa7.38□□□□□ -1.23
SHKBP1-210ENST00000595874 CAV2P51636 162 aa7.38□□□□□ -1.23
SHKBP1-210ENST00000595874 CNN1P51911 297 aaKnown RBP7.38□□□□□ -1.23
SHKBP1-210ENST00000595874 FCN2Q15485 313 aa7.38□□□□□ -1.23
SHKBP1-210ENST00000595874 MORN5Q5VZ52 161 aa7.38□□□□□ -1.23
SHKBP1-210ENST00000595874 SHANK2-AS3Q9BTD1 123 aa7.38□□□□□ -1.23
SHKBP1-210ENST00000595874 ARV1Q9H2C2 271 aa7.38□□□□□ -1.23
SHKBP1-210ENST00000595874 GOLT1BQ9Y3E0 138 aa7.38□□□□□ -1.23
SHKBP1-210ENST00000595874 C11orf94C9JXX5 98 aa7.37□□□□□ -1.23
SHKBP1-210ENST00000595874 GOSR2O14653 212 aa7.37□□□□□ -1.23
SHKBP1-210ENST00000595874 AGPAT2O15120 278 aa7.37□□□□□ -1.23
SHKBP1-210ENST00000595874 CFDP00746 253 aaPredicted RBP7.37□□□□□ -1.23
SHKBP1-210ENST00000595874 MIC13Q5XKP0 118 aa7.37□□□□□ -1.23
SHKBP1-210ENST00000595874 ZNF705AQ6ZN79 300 aaPredicted RBP7.37□□□□□ -1.23
SHKBP1-210ENST00000595874 C12orf45Q8N5I9 185 aaPredicted RBP7.37□□□□□ -1.23
SHKBP1-210ENST00000595874 OR11H7Q8NGC8 314 aa7.37□□□□□ -1.23
SHKBP1-210ENST00000595874 ZNF431Q8TF32 576 aaPredicted RBP7.37□□□□□ -1.23
SHKBP1-210ENST00000595874 MGST2Q99735 147 aa7.37□□□□□ -1.23
SHKBP1-210ENST00000595874 HRH4Q9H3N8 390 aa7.37□□□□□ -1.23
SHKBP1-210ENST00000595874 NPVFQ9HCQ7 196 aa7.37□□□□□ -1.23
SHKBP1-210ENST00000595874 SEPSECSQ9HD40 501 aaKnown RBP7.37□□□□□ -1.23
SHKBP1-210ENST00000595874 PPP1R14DQ9NXH3 145 aa7.37□□□□□ -1.23
SHKBP1-210ENST00000595874 YTHDF2Q9Y5A9 579 aaKnown RBP7.37□□□□□ -1.23
SHKBP1-210ENST00000595874 RFNGQ9Y644 331 aa7.37□□□□□ -1.23
SHKBP1-210ENST00000595874 IGLV2-18A0A075B6J9 118 aa7.36□□□□□ -1.23
SHKBP1-210ENST00000595874 UBE2L5PA0A1B0GUS4 154 aa7.36□□□□□ -1.23
SHKBP1-210ENST00000595874 FAM240BA0A1B0GVZ2 78 aa7.36□□□□□ -1.23
SHKBP1-210ENST00000595874 IGSF23A1L1A6 192 aa7.36□□□□□ -1.23
SHKBP1-210ENST00000595874 COX7A2P2O60397 106 aa7.36□□□□□ -1.23
SHKBP1-210ENST00000595874 HBE1P02100 147 aa7.36□□□□□ -1.23
SHKBP1-210ENST00000595874 SPART-AS1P0CW21 52 aa7.36□□□□□ -1.23
SHKBP1-210ENST00000595874 AZU1P20160 251 aa7.36□□□□□ -1.23
SHKBP1-210ENST00000595874 MEOX2P50222 304 aa7.36□□□□□ -1.23
SHKBP1-210ENST00000595874 RAB32Q13637 225 aa7.36□□□□□ -1.23
SHKBP1-210ENST00000595874 CNPY1Q3B7I2 92 aa7.36□□□□□ -1.23
SHKBP1-210ENST00000595874 TEPPQ6URK8 271 aa7.36□□□□□ -1.23
SHKBP1-210ENST00000595874 AMTNQ6UX39 209 aa7.36□□□□□ -1.23
SHKBP1-210ENST00000595874 LINC00305Q7Z4B0 112 aa7.36□□□□□ -1.23
SHKBP1-210ENST00000595874 PRAC2D3DTV9 90 aa7.35□□□□□ -1.23
SHKBP1-210ENST00000595874 SLC17A3O00476 420 aa7.35□□□□□ -1.23
SHKBP1-210ENST00000595874 TSC22D2O75157 780 aa7.35□□□□□ -1.23
SHKBP1-210ENST00000595874 BAXQ07812 192 aa7.35□□□□□ -1.23
SHKBP1-210ENST00000595874 KIR3DS1Q14943 382 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms