RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 GIPP09681 153 aaPredicted RBP10.16□□□□□ -0.78
SHKBP1-207ENST00000595631 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.16□□□□□ -0.78
SHKBP1-207ENST00000595631 LINC00305Q7Z4B0 112 aa10.16□□□□□ -0.78
SHKBP1-207ENST00000595631 NPCDR1Q9BY65 106 aa10.16□□□□□ -0.78
SHKBP1-207ENST00000595631 WFDC1Q9HC57 220 aa10.16□□□□□ -0.78
SHKBP1-207ENST00000595631 SLC39A9Q9NUM3 307 aa10.16□□□□□ -0.78
SHKBP1-207ENST00000595631 GALR1P47211 349 aa10.15□□□□□ -0.78
SHKBP1-207ENST00000595631 RPL29P47914 159 aaKnown RBP10.15□□□□□ -0.78
SHKBP1-207ENST00000595631 B2MP61769 119 aa10.15□□□□□ -0.78
SHKBP1-207ENST00000595631 GCSAMLQ5JQS6 135 aa10.15□□□□□ -0.78
SHKBP1-207ENST00000595631 PXDC1Q5TGL8 231 aa10.15□□□□□ -0.78
SHKBP1-207ENST00000595631 C10orf113Q5VZT2 155 aa10.15□□□□□ -0.78
SHKBP1-207ENST00000595631 IGFL4Q6B9Z1 124 aa10.15□□□□□ -0.78
SHKBP1-207ENST00000595631 CHAC2Q8WUX2 184 aa10.15□□□□□ -0.78
SHKBP1-207ENST00000595631 LINC00052Q96N35 136 aa10.15□□□□□ -0.78
SHKBP1-207ENST00000595631 ATP5SQ99766 215 aa10.15□□□□□ -0.78
SHKBP1-207ENST00000595631 WDR61Q9GZS3 305 aaKnown RBP10.15□□□□□ -0.78
SHKBP1-207ENST00000595631 TRAV5A0A0B4J249 113 aa10.14□□□□□ -0.79
SHKBP1-207ENST00000595631 G3V3Q6 166 aa10.14□□□□□ -0.79
SHKBP1-207ENST00000595631 SNRPCP09234 159 aaKnown RBP10.14□□□□□ -0.79
SHKBP1-207ENST00000595631 APOC4P55056 127 aa10.14□□□□□ -0.79
SHKBP1-207ENST00000595631 SNRPD3P62318 126 aaKnown RBP10.14□□□□□ -0.79
SHKBP1-207ENST00000595631 DEFB135Q30KP9 77 aa10.14□□□□□ -0.79
SHKBP1-207ENST00000595631 ACTL10Q5JWF8 245 aa10.14□□□□□ -0.79
SHKBP1-207ENST00000595631 GDF5OSQ5U4N7 250 aa10.14□□□□□ -0.79
SHKBP1-207ENST00000595631 Q6ZRG5 221 aa10.14□□□□□ -0.79
SHKBP1-207ENST00000595631 C20orf173Q96LM9 149 aa10.14□□□□□ -0.79
SHKBP1-207ENST00000595631 DNAJC4Q9NNZ3 241 aa10.14□□□□□ -0.79
SHKBP1-207ENST00000595631 RFNGQ9Y644 331 aa10.14□□□□□ -0.79
SHKBP1-207ENST00000595631 MRPS12O15235 138 aaKnown RBP10.13□□□□□ -0.79
SHKBP1-207ENST00000595631 MPDU1O75352 247 aa10.13□□□□□ -0.79
SHKBP1-207ENST00000595631 PRB4P10163 310 aaPredicted RBP10.13□□□□□ -0.79
SHKBP1-207ENST00000595631 RPL7P18124 248 aaKnown RBP10.13□□□□□ -0.79
SHKBP1-207ENST00000595631 ATF4P18848 351 aaPredicted RBP10.13□□□□□ -0.79
SHKBP1-207ENST00000595631 S100A7P31151 101 aa10.13□□□□□ -0.79
SHKBP1-207ENST00000595631 PSMB3P49720 205 aa10.13□□□□□ -0.79
SHKBP1-207ENST00000595631 FGL1Q08830 312 aa10.13□□□□□ -0.79
SHKBP1-207ENST00000595631 TRPT1Q86TN4 253 aaKnown RBP10.13□□□□□ -0.79
SHKBP1-207ENST00000595631 STHQ8IWL8 128 aa10.13□□□□□ -0.79
SHKBP1-207ENST00000595631 OR1L4Q8NGR5 311 aa10.13□□□□□ -0.79
SHKBP1-207ENST00000595631 OR2T35Q8NGX2 323 aa10.13□□□□□ -0.79
SHKBP1-207ENST00000595631 C16orf92Q96LL3 132 aa10.13□□□□□ -0.79
SHKBP1-207ENST00000595631 GPR82Q96P67 336 aa10.13□□□□□ -0.79
SHKBP1-207ENST00000595631 ELOA3CA0A087WX78 387 aaPredicted RBP10.12□□□□□ -0.79
SHKBP1-207ENST00000595631 TRAV8-2A0A0B4J237 113 aa10.12□□□□□ -0.79
SHKBP1-207ENST00000595631 KIR2DL5BA0A0G2JN68 375 aa10.12□□□□□ -0.79
SHKBP1-207ENST00000595631 KIR2DL5BA0A0G2JPC4 375 aa10.12□□□□□ -0.79
SHKBP1-207ENST00000595631 F6UB75 175 aa10.12□□□□□ -0.79
SHKBP1-207ENST00000595631 SMLR1H3BR10 107 aa10.12□□□□□ -0.79
SHKBP1-207ENST00000595631 H3BTX0 84 aa10.12□□□□□ -0.79
SHKBP1-207ENST00000595631 HLA-DMBP28068 263 aa10.12□□□□□ -0.79
SHKBP1-207ENST00000595631 ID1P41134 155 aa10.12□□□□□ -0.79
SHKBP1-207ENST00000595631 KIR2DL5AQ8N109 375 aa10.12□□□□□ -0.79
SHKBP1-207ENST00000595631 RNF182Q8N6D2 247 aa10.12□□□□□ -0.79
SHKBP1-207ENST00000595631 KIR2DL5BQ8NHK3 375 aa10.12□□□□□ -0.79
SHKBP1-207ENST00000595631 PFDN5Q99471 154 aa10.12□□□□□ -0.79
SHKBP1-207ENST00000595631 OVOL2Q9BRP0 275 aa10.12□□□□□ -0.79
SHKBP1-207ENST00000595631 SEPSECSQ9HD40 501 aaKnown RBP10.12□□□□□ -0.79
SHKBP1-207ENST00000595631 FXYD6-FXYD2A0A087WZ82 144 aa10.11□□□□□ -0.79
SHKBP1-207ENST00000595631 ISLRO14498 428 aa10.11□□□□□ -0.79
SHKBP1-207ENST00000595631 C4BPBP20851 252 aa10.11□□□□□ -0.79
SHKBP1-207ENST00000595631 MEOX2P50222 304 aa10.11□□□□□ -0.79
SHKBP1-207ENST00000595631 SPATA31B1PQ5VZV4 182 aa10.11□□□□□ -0.79
SHKBP1-207ENST00000595631 ASB13Q8WXK3 278 aa10.11□□□□□ -0.79
SHKBP1-207ENST00000595631 WWC2-AS2Q96NR7 200 aa10.11□□□□□ -0.79
SHKBP1-207ENST00000595631 AQP10Q96PS8 301 aa10.11□□□□□ -0.79
SHKBP1-207ENST00000595631 CSTL1Q9H114 145 aa10.11□□□□□ -0.79
SHKBP1-207ENST00000595631 A0A087X0K7 114 aa10.1□□□□□ -0.79
SHKBP1-207ENST00000595631 RNF222A6NCQ9 220 aa10.1□□□□□ -0.79
SHKBP1-207ENST00000595631 CA1P00915 261 aaPredicted RBP10.1□□□□□ -0.79
SHKBP1-207ENST00000595631 IFNA5P01569 189 aa10.1□□□□□ -0.79
SHKBP1-207ENST00000595631 IGKV3-20P01619 116 aa10.1□□□□□ -0.79
SHKBP1-207ENST00000595631 GIG44P09565 113 aaPredicted RBP10.1□□□□□ -0.79
SHKBP1-207ENST00000595631 S100A7AQ86SG5 101 aa10.1□□□□□ -0.79
SHKBP1-207ENST00000595631 ZNF709Q8N972 641 aa10.1□□□□□ -0.79
SHKBP1-207ENST00000595631 SCGB1C1Q8TD33 95 aa10.1□□□□□ -0.79
SHKBP1-207ENST00000595631 NBEAL2Q6ZNJ1 2754 aa10.1□□□□□ -0.79
SHKBP1-207ENST00000595631 H3BMM0 161 aa10.09□□□□□ -0.79
SHKBP1-207ENST00000595631 H3BQ15 152 aa10.09□□□□□ -0.79
SHKBP1-207ENST00000595631 SLC17A3O00476 420 aa10.09□□□□□ -0.79
SHKBP1-207ENST00000595631 UBE2CO00762 179 aa10.09□□□□□ -0.79
SHKBP1-207ENST00000595631 SPRY2O43597 315 aa10.09□□□□□ -0.79
SHKBP1-207ENST00000595631 HLA-DRB4P13762 266 aa10.09□□□□□ -0.79
SHKBP1-207ENST00000595631 FFAR4Q5NUL3 377 aa10.09□□□□□ -0.79
SHKBP1-207ENST00000595631 FAM78BQ5VT40 261 aa10.09□□□□□ -0.79
SHKBP1-207ENST00000595631 Q6ZWC4 215 aa10.09□□□□□ -0.79
SHKBP1-207ENST00000595631 MIR17HGQ75NE6 70 aa10.09□□□□□ -0.79
SHKBP1-207ENST00000595631 BPIFA4PQ86YQ2 179 aa10.09□□□□□ -0.79
SHKBP1-207ENST00000595631 GATAD1Q8WUU5 269 aa10.09□□□□□ -0.79
SHKBP1-207ENST00000595631 SAV1Q9H4B6 383 aaPredicted RBP10.09□□□□□ -0.79
SHKBP1-207ENST00000595631 TNFSF18Q9UNG2 199 aa10.09□□□□□ -0.79
SHKBP1-207ENST00000595631 HLA-DRB4X5D2U9 266 aa10.09□□□□□ -0.79
SHKBP1-207ENST00000595631 C17orf112F2Z3M2 114 aa10.08□□□□□ -0.8
SHKBP1-207ENST00000595631 EIF3GO75821 320 aaKnown RBP eCLIP10.08□□□□□ -0.8
SHKBP1-207ENST00000595631 IGLC2P0DOY2 106 aa10.08□□□□□ -0.8
SHKBP1-207ENST00000595631 PYYP10082 97 aa10.08□□□□□ -0.8
SHKBP1-207ENST00000595631 FXYD7P58549 80 aa10.08□□□□□ -0.8
SHKBP1-207ENST00000595631 SAMD13Q5VXD3 122 aa10.08□□□□□ -0.8
SHKBP1-207ENST00000595631 FOXI2Q6ZQN5 318 aa10.08□□□□□ -0.8
SHKBP1-207ENST00000595631 RNF183Q96D59 192 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 183.1 ms