RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 CFDP00746 253 aaPredicted RBP11.33□□□□□ -0.6
USE1-206ENST00000595101 OR5G3P0C626 314 aa11.33□□□□□ -0.6
USE1-206ENST00000595101 PLP1P60201 277 aa11.33□□□□□ -0.6
USE1-206ENST00000595101 SELENOTP62341 195 aa11.33□□□□□ -0.6
USE1-206ENST00000595101 Q5BKY6 102 aa11.33□□□□□ -0.6
USE1-206ENST00000595101 PSMG4Q5JS54 123 aa11.33□□□□□ -0.6
USE1-206ENST00000595101 C1orf194Q5T5A4 169 aa11.33□□□□□ -0.6
USE1-206ENST00000595101 OR5C1Q8NGR4 320 aa11.33□□□□□ -0.6
USE1-206ENST00000595101 THAP6Q8TBB0 222 aa11.33□□□□□ -0.6
USE1-206ENST00000595101 SPATA25Q9BR10 227 aa11.33□□□□□ -0.6
USE1-206ENST00000595101 MED28Q9H204 178 aa11.33□□□□□ -0.6
USE1-206ENST00000595101 DNAH7Q8WXX0 4024 aa11.33□□□□□ -0.6
USE1-206ENST00000595101 H3BRN7 92 aa11.32□□□□□ -0.6
USE1-206ENST00000595101 HYPMO75409 117 aa11.32□□□□□ -0.6
USE1-206ENST00000595101 CAMLGP49069 296 aa11.32□□□□□ -0.6
USE1-206ENST00000595101 CLINT1Q14677 625 aa11.32□□□□□ -0.6
USE1-206ENST00000595101 MORN5Q5VZ52 161 aa11.32□□□□□ -0.6
USE1-206ENST00000595101 TMEM37Q8WXS4 190 aa11.32□□□□□ -0.6
USE1-206ENST00000595101 HIGD1AQ9Y241 93 aa11.32□□□□□ -0.6
USE1-206ENST00000595101 HBG1P69891 147 aa11.31□□□□□ -0.6
USE1-206ENST00000595101 HBG2P69892 147 aa11.31□□□□□ -0.6
USE1-206ENST00000595101 BAXQ07812 192 aa11.31□□□□□ -0.6
USE1-206ENST00000595101 MAJINQ3KP22 176 aa11.31□□□□□ -0.6
USE1-206ENST00000595101 SHANK2-AS3Q9BTD1 123 aa11.31□□□□□ -0.6
USE1-206ENST00000595101 RSG1Q9BU20 258 aa11.31□□□□□ -0.6
USE1-206ENST00000595101 ARV1Q9H2C2 271 aa11.31□□□□□ -0.6
USE1-206ENST00000595101 SOCS3O14543 225 aa11.31□□□□□ -0.6
USE1-206ENST00000595101 SNRPCP09234 159 aaKnown RBP11.31□□□□□ -0.6
USE1-206ENST00000595101 ZNF546Q86UE3 836 aa11.31□□□□□ -0.6
USE1-206ENST00000595101 OVOL2Q9BRP0 275 aa11.31□□□□□ -0.6
USE1-206ENST00000595101 FGF7P21781 194 aa11.3□□□□□ -0.6
USE1-206ENST00000595101 NUP62P37198 522 aaPredicted RBP11.3□□□□□ -0.6
USE1-206ENST00000595101 CMC4P56277 68 aaPredicted RBP11.3□□□□□ -0.6
USE1-206ENST00000595101 RAP2BP61225 183 aa11.3□□□□□ -0.6
USE1-206ENST00000595101 PRR20EP86478 221 aa11.3□□□□□ -0.6
USE1-206ENST00000595101 PRR20CP86479 221 aa11.3□□□□□ -0.6
USE1-206ENST00000595101 PRR20DP86480 221 aa11.3□□□□□ -0.6
USE1-206ENST00000595101 PRR20BP86481 221 aa11.3□□□□□ -0.6
USE1-206ENST00000595101 PRR20AP86496 221 aa11.3□□□□□ -0.6
USE1-206ENST00000595101 DEFB135Q30KP9 77 aa11.3□□□□□ -0.6
USE1-206ENST00000595101 ACTL10Q5JWF8 245 aa11.3□□□□□ -0.6
USE1-206ENST00000595101 IGFL4Q6B9Z1 124 aa11.3□□□□□ -0.6
USE1-206ENST00000595101 WWC2-AS2Q96NR7 200 aa11.3□□□□□ -0.6
USE1-206ENST00000595101 SLC25A31Q9H0C2 315 aa11.3□□□□□ -0.6
USE1-206ENST00000595101 AGRNO00468 2067 aa11.29□□□□□ -0.6
USE1-206ENST00000595101 PRB4P10163 310 aaPredicted RBP11.29□□□□□ -0.6
USE1-206ENST00000595101 ATP6V1FQ16864 119 aa11.29□□□□□ -0.6
USE1-206ENST00000595101 GDF5OSQ5U4N7 250 aa11.29□□□□□ -0.6
USE1-206ENST00000595101 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.29□□□□□ -0.6
USE1-206ENST00000595101 LINC00305Q7Z4B0 112 aa11.29□□□□□ -0.6
USE1-206ENST00000595101 LINC00518Q8N0U6 118 aa11.29□□□□□ -0.6
USE1-206ENST00000595101 C20orf173Q96LM9 149 aa11.29□□□□□ -0.6
USE1-206ENST00000595101 SMIM3Q9BZL3 60 aa11.29□□□□□ -0.6
USE1-206ENST00000595101 FBXL17Q9UF56 701 aa11.29□□□□□ -0.6
USE1-206ENST00000595101 RPL12P30050 165 aaKnown RBP11.28□□□□□ -0.6
USE1-206ENST00000595101 GCSAMLQ5JQS6 135 aa11.28□□□□□ -0.6
USE1-206ENST00000595101 LINC00052Q96N35 136 aa11.28□□□□□ -0.6
USE1-206ENST00000595101 TRAV5A0A0B4J249 113 aa11.28□□□□□ -0.6
USE1-206ENST00000595101 GIG44P09565 113 aaPredicted RBP11.28□□□□□ -0.6
USE1-206ENST00000595101 LYL1P12980 280 aa11.28□□□□□ -0.6
USE1-206ENST00000595101 APOC4P55056 127 aa11.28□□□□□ -0.6
USE1-206ENST00000595101 OPCMLQ14982 345 aa11.28□□□□□ -0.6
USE1-206ENST00000595101 NPCDR1Q9BY65 106 aa11.28□□□□□ -0.6
USE1-206ENST00000595101 CSTL1Q9H114 145 aa11.28□□□□□ -0.6
USE1-206ENST00000595101 WFDC1Q9HC57 220 aa11.28□□□□□ -0.6
USE1-206ENST00000595101 KIR2DL5BA0A0G2JN68 375 aa11.27□□□□□ -0.61
USE1-206ENST00000595101 KIR2DL5BA0A0G2JPC4 375 aa11.27□□□□□ -0.61
USE1-206ENST00000595101 MRPS12O15235 138 aaKnown RBP11.27□□□□□ -0.61
USE1-206ENST00000595101 COX7A2P2O60397 106 aa11.27□□□□□ -0.61
USE1-206ENST00000595101 PET100P0DJ07 73 aa11.27□□□□□ -0.61
USE1-206ENST00000595101 GALR1P47211 349 aa11.27□□□□□ -0.61
USE1-206ENST00000595101 RPL29P47914 159 aaKnown RBP11.27□□□□□ -0.61
USE1-206ENST00000595101 SNRPD3P62318 126 aaKnown RBP11.27□□□□□ -0.61
USE1-206ENST00000595101 FGL1Q08830 312 aa11.27□□□□□ -0.61
USE1-206ENST00000595101 RAB31Q13636 194 aa11.27□□□□□ -0.61
USE1-206ENST00000595101 TRPT1Q86TN4 253 aaKnown RBP11.27□□□□□ -0.61
USE1-206ENST00000595101 STHQ8IWL8 128 aa11.27□□□□□ -0.61
USE1-206ENST00000595101 CCDC28AQ8IWP9 274 aa11.27□□□□□ -0.61
USE1-206ENST00000595101 KIR2DL5AQ8N109 375 aa11.27□□□□□ -0.61
USE1-206ENST00000595101 KIR2DL5BQ8NHK3 375 aa11.27□□□□□ -0.61
USE1-206ENST00000595101 EDA2RQ9HAV5 297 aa11.27□□□□□ -0.61
USE1-206ENST00000595101 SLC39A9Q9NUM3 307 aa11.27□□□□□ -0.61
USE1-206ENST00000595101 HSPB11Q9Y547 144 aa11.27□□□□□ -0.61
USE1-206ENST00000595101 RFNGQ9Y644 331 aa11.27□□□□□ -0.61
USE1-206ENST00000595101 PXMP4Q9Y6I8 212 aa11.27□□□□□ -0.61
USE1-206ENST00000595101 CSMD3Q7Z407 3707 aa11.27□□□□□ -0.61
USE1-206ENST00000595101 TRAV8-2A0A0B4J237 113 aa11.26□□□□□ -0.61
USE1-206ENST00000595101 F6UB75 175 aa11.26□□□□□ -0.61
USE1-206ENST00000595101 DNAJC4Q9NNZ3 241 aa11.26□□□□□ -0.61
USE1-206ENST00000595101 H3BTX0 84 aa11.26□□□□□ -0.61
USE1-206ENST00000595101 PCP4P48539 62 aa11.26□□□□□ -0.61
USE1-206ENST00000595101 C10orf113Q5VZT2 155 aa11.26□□□□□ -0.61
USE1-206ENST00000595101 Q6ZRG5 221 aa11.26□□□□□ -0.61
USE1-206ENST00000595101 RNF182Q8N6D2 247 aa11.26□□□□□ -0.61
USE1-206ENST00000595101 CHAC2Q8WUX2 184 aa11.26□□□□□ -0.61
USE1-206ENST00000595101 C16orf92Q96LL3 132 aa11.26□□□□□ -0.61
USE1-206ENST00000595101 WDR61Q9GZS3 305 aaKnown RBP11.26□□□□□ -0.61
USE1-206ENST00000595101 STARD9Q9P2P6 4700 aa11.25□□□□□ -0.61
USE1-206ENST00000595101 CA1P00915 261 aaPredicted RBP11.25□□□□□ -0.61
USE1-206ENST00000595101 C4BPBP20851 252 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms