RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 HIGD1AQ9Y241 93 aa10.99□□□□□ -0.65
TRIM28-205ENST00000595028 ZNF705EA8MWA4 302 aaPredicted RBP10.98□□□□□ -0.65
TRIM28-205ENST00000595028 HYPMO75409 117 aa10.98□□□□□ -0.65
TRIM28-205ENST00000595028 PVALBP20472 110 aaPredicted RBP10.98□□□□□ -0.65
TRIM28-205ENST00000595028 GDF5OSQ5U4N7 250 aa10.98□□□□□ -0.65
TRIM28-205ENST00000595028 Q8NAQ8 132 aa10.98□□□□□ -0.65
TRIM28-205ENST00000595028 CSNK1G2-AS1Q8NCQ2 148 aa10.98□□□□□ -0.65
TRIM28-205ENST00000595028 RSG1Q9BU20 258 aa10.98□□□□□ -0.65
TRIM28-205ENST00000595028 SAV1Q9H4B6 383 aaPredicted RBP10.98□□□□□ -0.65
TRIM28-205ENST00000595028 LYRM2Q9NU23 88 aaPredicted RBP10.98□□□□□ -0.65
TRIM28-205ENST00000595028 FAM24AA6NFZ4 105 aa10.97□□□□□ -0.65
TRIM28-205ENST00000595028 PRAF2O60831 178 aa10.97□□□□□ -0.65
TRIM28-205ENST00000595028 OR5G3P0C626 314 aa10.97□□□□□ -0.65
TRIM28-205ENST00000595028 NUTF2P61970 127 aaKnown RBP10.97□□□□□ -0.65
TRIM28-205ENST00000595028 RAB32Q13637 225 aa10.97□□□□□ -0.65
TRIM28-205ENST00000595028 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.97□□□□□ -0.65
TRIM28-205ENST00000595028 C16orf92Q96LL3 132 aa10.97□□□□□ -0.65
TRIM28-205ENST00000595028 UHRF2Q96PU4 802 aa10.97□□□□□ -0.65
TRIM28-205ENST00000595028 C1QTNF4Q9BXJ3 329 aa10.97□□□□□ -0.65
TRIM28-205ENST00000595028 ARL6Q9H0F7 186 aa10.97□□□□□ -0.65
TRIM28-205ENST00000595028 CLEC5AQ9NY25 188 aa10.97□□□□□ -0.65
TRIM28-205ENST00000595028 X6R8D5 127 aa10.97□□□□□ -0.65
TRIM28-205ENST00000595028 IGHV4-28A0A0C4DH34 117 aa10.96□□□□□ -0.65
TRIM28-205ENST00000595028 INMT-MINDY4F8WBC2 141 aa10.96□□□□□ -0.65
TRIM28-205ENST00000595028 AGPAT2O15120 278 aa10.96□□□□□ -0.65
TRIM28-205ENST00000595028 DEFB4AO15263 64 aa10.96□□□□□ -0.65
TRIM28-205ENST00000595028 CST7O76096 145 aa10.96□□□□□ -0.65
TRIM28-205ENST00000595028 RPL7P18124 248 aaKnown RBP10.96□□□□□ -0.65
TRIM28-205ENST00000595028 DEFA1P59665 94 aa10.96□□□□□ -0.65
TRIM28-205ENST00000595028 DEFA3P59666 94 aa10.96□□□□□ -0.65
TRIM28-205ENST00000595028 PXDC1Q5TGL8 231 aa10.96□□□□□ -0.65
TRIM28-205ENST00000595028 C20orf173Q96LM9 149 aa10.96□□□□□ -0.65
TRIM28-205ENST00000595028 MGST2Q99735 147 aa10.96□□□□□ -0.65
TRIM28-205ENST00000595028 DNAH10Q8IVF4 4471 aa10.96□□□□□ -0.66
TRIM28-205ENST00000595028 IGSF23A1L1A6 192 aa10.95□□□□□ -0.66
TRIM28-205ENST00000595028 GOSR2O14653 212 aa10.95□□□□□ -0.66
TRIM28-205ENST00000595028 MIFP14174 115 aa10.95□□□□□ -0.66
TRIM28-205ENST00000595028 SULT1A1P50225 295 aa10.95□□□□□ -0.66
TRIM28-205ENST00000595028 SPATA31B1PQ5VZV4 182 aa10.95□□□□□ -0.66
TRIM28-205ENST00000595028 CEMP1Q6PRD7 247 aaPredicted RBP10.95□□□□□ -0.66
TRIM28-205ENST00000595028 PATE2Q6UY27 113 aa10.95□□□□□ -0.66
TRIM28-205ENST00000595028 S100A7AQ86SG5 101 aa10.95□□□□□ -0.66
TRIM28-205ENST00000595028 STX12Q86Y82 276 aa10.95□□□□□ -0.66
TRIM28-205ENST00000595028 C11orf45Q8TAV5 145 aa10.95□□□□□ -0.66
TRIM28-205ENST00000595028 CLUHP3Q96NS8 147 aa10.95□□□□□ -0.66
TRIM28-205ENST00000595028 MFFQ9GZY8 342 aa10.95□□□□□ -0.66
TRIM28-205ENST00000595028 ARV1Q9H2C2 271 aa10.95□□□□□ -0.66
TRIM28-205ENST00000595028 RPRMQ9NS64 109 aa10.95□□□□□ -0.66
TRIM28-205ENST00000595028 XCL2Q9UBD3 114 aa10.95□□□□□ -0.66
TRIM28-205ENST00000595028 A0A0J9YX75 114 aa10.94□□□□□ -0.66
TRIM28-205ENST00000595028 F6UB75 175 aa10.94□□□□□ -0.66
TRIM28-205ENST00000595028 IGKV3-20P01619 116 aa10.94□□□□□ -0.66
TRIM28-205ENST00000595028 CAMLGP49069 296 aa10.94□□□□□ -0.66
TRIM28-205ENST00000595028 NANOS2P60321 138 aaKnown RBP10.94□□□□□ -0.66
TRIM28-205ENST00000595028 VWC2Q2TAL6 325 aa10.94□□□□□ -0.66
TRIM28-205ENST00000595028 EBLN2Q6P2I7 272 aa10.94□□□□□ -0.66
TRIM28-205ENST00000595028 TMEM252Q8N6L7 170 aa10.94□□□□□ -0.66
TRIM28-205ENST00000595028 ZNF709Q8N972 641 aa10.94□□□□□ -0.66
TRIM28-205ENST00000595028 MARVELD1Q9BSK0 173 aa10.94□□□□□ -0.66
TRIM28-205ENST00000595028 UQCC1Q9NVA1 299 aa10.94□□□□□ -0.66
TRIM28-205ENST00000595028 WDR83OSQ9Y284 106 aa10.94□□□□□ -0.66
TRIM28-205ENST00000595028 A0A087X0K7 114 aa10.93□□□□□ -0.66
TRIM28-205ENST00000595028 TRAV8-2A0A0B4J237 113 aa10.93□□□□□ -0.66
TRIM28-205ENST00000595028 UBE2L5PA0A1B0GUS4 154 aa10.93□□□□□ -0.66
TRIM28-205ENST00000595028 SIX6O95475 246 aa10.93□□□□□ -0.66
TRIM28-205ENST00000595028 RBMY1A1P0DJD3 496 aaKnown RBP10.93□□□□□ -0.66
TRIM28-205ENST00000595028 RBMY1CP0DJD4 496 aa10.93□□□□□ -0.66
TRIM28-205ENST00000595028 HBG1P69891 147 aa10.93□□□□□ -0.66
TRIM28-205ENST00000595028 HBG2P69892 147 aa10.93□□□□□ -0.66
TRIM28-205ENST00000595028 FGL1Q08830 312 aa10.93□□□□□ -0.66
TRIM28-205ENST00000595028 RBMY1FQ15415 496 aaKnown RBP10.93□□□□□ -0.66
TRIM28-205ENST00000595028 OR4B1Q8NGF8 309 aa10.93□□□□□ -0.66
TRIM28-205ENST00000595028 PHLDA1Q8WV24 401 aaPredicted RBP10.93□□□□□ -0.66
TRIM28-205ENST00000595028 RNF24Q9Y225 148 aa10.93□□□□□ -0.66
TRIM28-205ENST00000595028 KLK5Q9Y337 293 aaPredicted RBP10.93□□□□□ -0.66
TRIM28-205ENST00000595028 MRPS12O15235 138 aaKnown RBP10.92□□□□□ -0.66
TRIM28-205ENST00000595028 COX7A2P2O60397 106 aa10.92□□□□□ -0.66
TRIM28-205ENST00000595028 S100A11P31949 105 aa10.92□□□□□ -0.66
TRIM28-205ENST00000595028 RAB31Q13636 194 aa10.92□□□□□ -0.66
TRIM28-205ENST00000595028 FAM78BQ5VT40 261 aa10.92□□□□□ -0.66
TRIM28-205ENST00000595028 ZNF705AQ6ZN79 300 aaPredicted RBP10.92□□□□□ -0.66
TRIM28-205ENST00000595028 LINC00305Q7Z4B0 112 aa10.92□□□□□ -0.66
TRIM28-205ENST00000595028 NMES1Q9C002 83 aa10.92□□□□□ -0.66
TRIM28-205ENST00000595028 HRH4Q9H3N8 390 aa10.92□□□□□ -0.66
TRIM28-205ENST00000595028 KMT2AQ03164 3969 aa10.92□□□□□ -0.66
TRIM28-205ENST00000595028 A8MTW9 85 aa10.91□□□□□ -0.66
TRIM28-205ENST00000595028 FXYD7P58549 80 aa10.91□□□□□ -0.66
TRIM28-205ENST00000595028 PRR20EP86478 221 aa10.91□□□□□ -0.66
TRIM28-205ENST00000595028 PRR20CP86479 221 aa10.91□□□□□ -0.66
TRIM28-205ENST00000595028 PRR20DP86480 221 aa10.91□□□□□ -0.66
TRIM28-205ENST00000595028 PRR20BP86481 221 aa10.91□□□□□ -0.66
TRIM28-205ENST00000595028 PRR20AP86496 221 aa10.91□□□□□ -0.66
TRIM28-205ENST00000595028 PSG9Q00887 426 aa10.91□□□□□ -0.66
TRIM28-205ENST00000595028 BAXQ07812 192 aa10.91□□□□□ -0.66
TRIM28-205ENST00000595028 MIC13Q5XKP0 118 aa10.91□□□□□ -0.66
TRIM28-205ENST00000595028 IGFL4Q6B9Z1 124 aa10.91□□□□□ -0.66
TRIM28-205ENST00000595028 RNF182Q8N6D2 247 aa10.91□□□□□ -0.66
TRIM28-205ENST00000595028 TMEM37Q8WXS4 190 aa10.91□□□□□ -0.66
TRIM28-205ENST00000595028 LINC00476Q8WZB0 136 aa10.91□□□□□ -0.66
TRIM28-205ENST00000595028 SLC35B3Q9H1N7 401 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms