RNA–Protein interactions for RNA: ENST00000594504.5

UPF1-203, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-203ENST00000594504 UBE2L5PA0A1B0GUS4 154 aa9.14□□□□□ -0.95
UPF1-203ENST00000594504 K7EQG2 157 aa9.14□□□□□ -0.95
UPF1-203ENST00000594504 DEFB4AO15263 64 aa9.14□□□□□ -0.95
UPF1-203ENST00000594504 HYPMO75409 117 aa9.14□□□□□ -0.95
UPF1-203ENST00000594504 CAMLGP49069 296 aa9.14□□□□□ -0.95
UPF1-203ENST00000594504 RAP2BP61225 183 aa9.14□□□□□ -0.95
UPF1-203ENST00000594504 NHLH2Q02577 135 aa9.14□□□□□ -0.95
UPF1-203ENST00000594504 PXDC1Q5TGL8 231 aa9.14□□□□□ -0.95
UPF1-203ENST00000594504 S100A7AQ86SG5 101 aa9.14□□□□□ -0.95
UPF1-203ENST00000594504 OR5C1Q8NGR4 320 aa9.14□□□□□ -0.95
UPF1-203ENST00000594504 DCANP1Q8TF63 244 aa9.14□□□□□ -0.95
UPF1-203ENST00000594504 NRN1Q9NPD7 142 aa9.14□□□□□ -0.95
UPF1-203ENST00000594504 DOK5Q9P104 306 aa9.14□□□□□ -0.95
UPF1-203ENST00000594504 MBD2Q9UBB5 411 aa9.14□□□□□ -0.95
UPF1-203ENST00000594504 HIGD1AQ9Y241 93 aa9.14□□□□□ -0.95
UPF1-203ENST00000594504 ZNF98A6NK75 572 aa9.13□□□□□ -0.95
UPF1-203ENST00000594504 MPDU1O75352 247 aa9.13□□□□□ -0.95
UPF1-203ENST00000594504 GIPP09681 153 aaPredicted RBP9.13□□□□□ -0.95
UPF1-203ENST00000594504 OR5G3P0C626 314 aa9.13□□□□□ -0.95
UPF1-203ENST00000594504 ATF4P18848 351 aaPredicted RBP9.13□□□□□ -0.95
UPF1-203ENST00000594504 LEMD1Q68G75 181 aa9.13□□□□□ -0.95
UPF1-203ENST00000594504 OR8I2Q8N0Y5 310 aa9.13□□□□□ -0.95
UPF1-203ENST00000594504 FAM24BQ8N5W8 94 aa9.13□□□□□ -0.95
UPF1-203ENST00000594504 OR11H2Q8NH07 326 aa9.13□□□□□ -0.95
UPF1-203ENST00000594504 THAP6Q8TBB0 222 aa9.13□□□□□ -0.95
UPF1-203ENST00000594504 CHAC2Q8WUX2 184 aa9.13□□□□□ -0.95
UPF1-203ENST00000594504 GPR82Q96P67 336 aa9.13□□□□□ -0.95
UPF1-203ENST00000594504 KRTAP17-1Q9BYP8 105 aa9.13□□□□□ -0.95
UPF1-203ENST00000594504 SLC25A39Q9BZJ4 359 aaPredicted RBP9.13□□□□□ -0.95
UPF1-203ENST00000594504 ARL6Q9H0F7 186 aa9.13□□□□□ -0.95
UPF1-203ENST00000594504 H3BRN7 92 aa9.12□□□□□ -0.95
UPF1-203ENST00000594504 FGF7P21781 194 aa9.12□□□□□ -0.95
UPF1-203ENST00000594504 RPL12P30050 165 aaKnown RBP9.12□□□□□ -0.95
UPF1-203ENST00000594504 GALR1P47211 349 aa9.12□□□□□ -0.95
UPF1-203ENST00000594504 DEFB131AP59861 70 aa9.12□□□□□ -0.95
UPF1-203ENST00000594504 FGL1Q08830 312 aa9.12□□□□□ -0.95
UPF1-203ENST00000594504 CLINT1Q14677 625 aa9.12□□□□□ -0.95
UPF1-203ENST00000594504 SHANK2-AS3Q9BTD1 123 aa9.12□□□□□ -0.95
UPF1-203ENST00000594504 SLC25A22Q9H936 323 aa9.12□□□□□ -0.95
UPF1-203ENST00000594504 SEPSECSQ9HD40 501 aaKnown RBP9.12□□□□□ -0.95
UPF1-203ENST00000594504 RNF24Q9Y225 148 aa9.12□□□□□ -0.95
UPF1-203ENST00000594504 HSPB11Q9Y547 144 aa9.12□□□□□ -0.95
UPF1-203ENST00000594504 ELOA3CA0A087WX78 387 aaPredicted RBP9.11□□□□□ -0.95
UPF1-203ENST00000594504 ZNF688P0C7X2 276 aa9.11□□□□□ -0.95
UPF1-203ENST00000594504 RPL29P47914 159 aaKnown RBP9.11□□□□□ -0.95
UPF1-203ENST00000594504 SNRPD3P62318 126 aaKnown RBP9.11□□□□□ -0.95
UPF1-203ENST00000594504 PRR20EP86478 221 aa9.11□□□□□ -0.95
UPF1-203ENST00000594504 PRR20CP86479 221 aa9.11□□□□□ -0.95
UPF1-203ENST00000594504 PRR20DP86480 221 aa9.11□□□□□ -0.95
UPF1-203ENST00000594504 PRR20BP86481 221 aa9.11□□□□□ -0.95
UPF1-203ENST00000594504 PRR20AP86496 221 aa9.11□□□□□ -0.95
UPF1-203ENST00000594504 OPCMLQ14982 345 aa9.11□□□□□ -0.95
UPF1-203ENST00000594504 MIC13Q5XKP0 118 aa9.11□□□□□ -0.95
UPF1-203ENST00000594504 Q6ZRG5 221 aa9.11□□□□□ -0.95
UPF1-203ENST00000594504 C11orf45Q8TAV5 145 aa9.11□□□□□ -0.95
UPF1-203ENST00000594504 SCRT1Q9BWW7 348 aa9.11□□□□□ -0.95
UPF1-203ENST00000594504 ARV1Q9H2C2 271 aa9.11□□□□□ -0.95
UPF1-203ENST00000594504 SLC25A32Q9H2D1 315 aa9.11□□□□□ -0.95
UPF1-203ENST00000594504 COX7A2P2O60397 106 aa9.1□□□□□ -0.95
UPF1-203ENST00000594504 CA1P00915 261 aaPredicted RBP9.1□□□□□ -0.95
UPF1-203ENST00000594504 RPL7P18124 248 aaKnown RBP9.1□□□□□ -0.95
UPF1-203ENST00000594504 MEOX2P50222 304 aa9.1□□□□□ -0.95
UPF1-203ENST00000594504 B2MP61769 119 aa9.1□□□□□ -0.95
UPF1-203ENST00000594504 SAMD13Q5VXD3 122 aa9.1□□□□□ -0.95
UPF1-203ENST00000594504 LGALS9CQ6DKI2 356 aa9.1□□□□□ -0.95
UPF1-203ENST00000594504 PATE2Q6UY27 113 aa9.1□□□□□ -0.95
UPF1-203ENST00000594504 OR1L4Q8NGR5 311 aa9.1□□□□□ -0.95
UPF1-203ENST00000594504 GATAD1Q8WUU5 269 aa9.1□□□□□ -0.95
UPF1-203ENST00000594504 UHRF2Q96PU4 802 aa9.1□□□□□ -0.95
UPF1-203ENST00000594504 ATP5SQ99766 215 aa9.1□□□□□ -0.95
UPF1-203ENST00000594504 NPCDR1Q9BY65 106 aa9.1□□□□□ -0.95
UPF1-203ENST00000594504 KMT2AQ03164 3969 aa9.09□□□□□ -0.95
UPF1-203ENST00000594504 ID1P41134 155 aa9.09□□□□□ -0.95
UPF1-203ENST00000594504 PSMG4Q5JS54 123 aa9.09□□□□□ -0.95
UPF1-203ENST00000594504 C10orf113Q5VZT2 155 aa9.09□□□□□ -0.95
UPF1-203ENST00000594504 LINC00305Q7Z4B0 112 aa9.09□□□□□ -0.95
UPF1-203ENST00000594504 TMEM37Q8WXS4 190 aa9.09□□□□□ -0.95
UPF1-203ENST00000594504 PFDN5Q99471 154 aa9.09□□□□□ -0.95
UPF1-203ENST00000594504 WDR61Q9GZS3 305 aaKnown RBP9.09□□□□□ -0.95
UPF1-203ENST00000594504 DNAJC4Q9NNZ3 241 aa9.09□□□□□ -0.95
UPF1-203ENST00000594504 KCNIP2Q9NS61 270 aa9.09□□□□□ -0.95
UPF1-203ENST00000594504 SLC39A9Q9NUM3 307 aa9.09□□□□□ -0.95
UPF1-203ENST00000594504 PXMP4Q9Y6I8 212 aa9.09□□□□□ -0.95
UPF1-203ENST00000594504 ISLRO14498 428 aa9.08□□□□□ -0.96
UPF1-203ENST00000594504 SOCS3O14543 225 aa9.08□□□□□ -0.96
UPF1-203ENST00000594504 IFNA5P01569 189 aa9.08□□□□□ -0.96
UPF1-203ENST00000594504 PSMB3P49720 205 aa9.08□□□□□ -0.96
UPF1-203ENST00000594504 ZNF709Q8N972 641 aa9.08□□□□□ -0.96
UPF1-203ENST00000594504 RSG1Q9BU20 258 aa9.08□□□□□ -0.96
UPF1-203ENST00000594504 KNCNA6PVL3 124 aa9.07□□□□□ -0.96
UPF1-203ENST00000594504 C17orf112F2Z3M2 114 aa9.07□□□□□ -0.96
UPF1-203ENST00000594504 GIG44P09565 113 aaPredicted RBP9.07□□□□□ -0.96
UPF1-203ENST00000594504 Q5BKY6 102 aa9.07□□□□□ -0.96
UPF1-203ENST00000594504 STHQ8IWL8 128 aa9.07□□□□□ -0.96
UPF1-203ENST00000594504 OR2T35Q8NGX2 323 aa9.07□□□□□ -0.96
UPF1-203ENST00000594504 AQP10Q96PS8 301 aa9.07□□□□□ -0.96
UPF1-203ENST00000594504 PARD6GQ9BYG4 376 aaPredicted RBP9.07□□□□□ -0.96
UPF1-203ENST00000594504 SMIM3Q9BZL3 60 aa9.07□□□□□ -0.96
UPF1-203ENST00000594504 C11orf68Q9H3H3 251 aaKnown RBP9.07□□□□□ -0.96
UPF1-203ENST00000594504 AGRNO00468 2067 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms