RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 LSM5Q9Y4Y9 91 aaKnown RBP11.07□□□□□ -0.64
TRIM28-203ENST00000593582 X6R8D5 127 aa11.07□□□□□ -0.64
TRIM28-203ENST00000593582 HYDINQ4G0P3 5121 aa11.06□□□□□ -0.64
TRIM28-203ENST00000593582 ALMS1Q8TCU4 4167 aa11.06□□□□□ -0.64
TRIM28-203ENST00000593582 A6NHS1 94 aa11.06□□□□□ -0.64
TRIM28-203ENST00000593582 H3BRN7 92 aa11.06□□□□□ -0.64
TRIM28-203ENST00000593582 K7EPK0 472 aa11.06□□□□□ -0.64
TRIM28-203ENST00000593582 GOSR2O14653 212 aa11.06□□□□□ -0.64
TRIM28-203ENST00000593582 DEDDO75618 318 aa11.06□□□□□ -0.64
TRIM28-203ENST00000593582 LY6G6CO95867 125 aa11.06□□□□□ -0.64
TRIM28-203ENST00000593582 RPL7P18124 248 aaKnown RBP11.06□□□□□ -0.64
TRIM28-203ENST00000593582 PVALBP20472 110 aaPredicted RBP11.06□□□□□ -0.64
TRIM28-203ENST00000593582 BCAP31P51572 246 aa11.06□□□□□ -0.64
TRIM28-203ENST00000593582 PLP1P60201 277 aa11.06□□□□□ -0.64
TRIM28-203ENST00000593582 SLC38A11Q08AI6 406 aa11.06□□□□□ -0.64
TRIM28-203ENST00000593582 GSG1LQ6UXU4 331 aa11.06□□□□□ -0.64
TRIM28-203ENST00000593582 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.06□□□□□ -0.64
TRIM28-203ENST00000593582 CLUHP3Q96NS8 147 aa11.06□□□□□ -0.64
TRIM28-203ENST00000593582 ARL6Q9H0F7 186 aa11.06□□□□□ -0.64
TRIM28-203ENST00000593582 UPK1BO75841 260 aa11.05□□□□□ -0.64
TRIM28-203ENST00000593582 CAV2P51636 162 aa11.05□□□□□ -0.64
TRIM28-203ENST00000593582 ARL16Q0P5N6 197 aa11.05□□□□□ -0.64
TRIM28-203ENST00000593582 PXDC1Q5TGL8 231 aa11.05□□□□□ -0.64
TRIM28-203ENST00000593582 ZNF546Q86UE3 836 aa11.05□□□□□ -0.64
TRIM28-203ENST00000593582 ENKURQ8TC29 256 aa11.05□□□□□ -0.64
TRIM28-203ENST00000593582 UHRF2Q96PU4 802 aa11.05□□□□□ -0.64
TRIM28-203ENST00000593582 PTTG2Q9NZH5 202 aa11.05□□□□□ -0.64
TRIM28-203ENST00000593582 RNF24Q9Y225 148 aa11.05□□□□□ -0.64
TRIM28-203ENST00000593582 A0A0J9YX75 114 aa11.04□□□□□ -0.64
TRIM28-203ENST00000593582 C11orf94C9JXX5 98 aa11.04□□□□□ -0.64
TRIM28-203ENST00000593582 F6UB75 175 aa11.04□□□□□ -0.64
TRIM28-203ENST00000593582 FXYD7P58549 80 aa11.04□□□□□ -0.64
TRIM28-203ENST00000593582 S100A10P60903 97 aa11.04□□□□□ -0.64
TRIM28-203ENST00000593582 PSG9Q00887 426 aa11.04□□□□□ -0.64
TRIM28-203ENST00000593582 FGL1Q08830 312 aa11.04□□□□□ -0.64
TRIM28-203ENST00000593582 FAM78BQ5VT40 261 aa11.04□□□□□ -0.64
TRIM28-203ENST00000593582 ZNF709Q8N972 641 aa11.04□□□□□ -0.64
TRIM28-203ENST00000593582 C2CD4CQ8TF44 421 aa11.04□□□□□ -0.64
TRIM28-203ENST00000593582 C20orf173Q96LM9 149 aa11.04□□□□□ -0.64
TRIM28-203ENST00000593582 C17orf77Q96MU5 243 aa11.04□□□□□ -0.64
TRIM28-203ENST00000593582 ELOA3CA0A087WX78 387 aaPredicted RBP11.03□□□□□ -0.64
TRIM28-203ENST00000593582 AGPAT2O15120 278 aa11.03□□□□□ -0.64
TRIM28-203ENST00000593582 CST7O76096 145 aa11.03□□□□□ -0.64
TRIM28-203ENST00000593582 RAB31Q13636 194 aa11.03□□□□□ -0.64
TRIM28-203ENST00000593582 ZNF705AQ6ZN79 300 aaPredicted RBP11.03□□□□□ -0.64
TRIM28-203ENST00000593582 SLC35B3Q9H1N7 401 aa11.03□□□□□ -0.64
TRIM28-203ENST00000593582 ARV1Q9H2C2 271 aa11.03□□□□□ -0.64
TRIM28-203ENST00000593582 GPN1Q9HCN4 374 aaPredicted RBP11.03□□□□□ -0.64
TRIM28-203ENST00000593582 HLA-DMBP28068 263 aa11.02□□□□□ -0.65
TRIM28-203ENST00000593582 NEU1Q99519 415 aa11.02□□□□□ -0.65
TRIM28-203ENST00000593582 MGST2Q99735 147 aa11.02□□□□□ -0.65
TRIM28-203ENST00000593582 C11orf1Q9H5F2 150 aa11.02□□□□□ -0.65
TRIM28-203ENST00000593582 IGHV3OR16-12A0A075B7B8 117 aa11.01□□□□□ -0.65
TRIM28-203ENST00000593582 TRAV8-2A0A0B4J237 113 aa11.01□□□□□ -0.65
TRIM28-203ENST00000593582 FAM24AA6NFZ4 105 aa11.01□□□□□ -0.65
TRIM28-203ENST00000593582 SMIM9A6NGZ8 99 aa11.01□□□□□ -0.65
TRIM28-203ENST00000593582 ZNF705FA8MVS1 300 aaPredicted RBP11.01□□□□□ -0.65
TRIM28-203ENST00000593582 COX7A2P2O60397 106 aa11.01□□□□□ -0.65
TRIM28-203ENST00000593582 ZNF705DP0CH99 300 aaPredicted RBP11.01□□□□□ -0.65
TRIM28-203ENST00000593582 ZNF705BP0CI00 300 aaPredicted RBP11.01□□□□□ -0.65
TRIM28-203ENST00000593582 CAMLGP49069 296 aa11.01□□□□□ -0.65
TRIM28-203ENST00000593582 SULT1A1P50225 295 aa11.01□□□□□ -0.65
TRIM28-203ENST00000593582 IL15RAQ13261 267 aa11.01□□□□□ -0.65
TRIM28-203ENST00000593582 RAB32Q13637 225 aa11.01□□□□□ -0.65
TRIM28-203ENST00000593582 IGFL4Q6B9Z1 124 aa11.01□□□□□ -0.65
TRIM28-203ENST00000593582 PATE2Q6UY27 113 aa11.01□□□□□ -0.65
TRIM28-203ENST00000593582 LINC00305Q7Z4B0 112 aa11.01□□□□□ -0.65
TRIM28-203ENST00000593582 STX12Q86Y82 276 aa11.01□□□□□ -0.65
TRIM28-203ENST00000593582 RNF182Q8N6D2 247 aa11.01□□□□□ -0.65
TRIM28-203ENST00000593582 LRRC20Q8TCA0 184 aa11.01□□□□□ -0.65
TRIM28-203ENST00000593582 LYRM2Q9NU23 88 aaPredicted RBP11.01□□□□□ -0.65
TRIM28-203ENST00000593582 UQCC1Q9NVA1 299 aa11.01□□□□□ -0.65
TRIM28-203ENST00000593582 GOLT1BQ9Y3E0 138 aa11.01□□□□□ -0.65
TRIM28-203ENST00000593582 A0A087X0K7 114 aa11□□□□□ -0.65
TRIM28-203ENST00000593582 TMEM189A5PLL7 270 aa11□□□□□ -0.65
TRIM28-203ENST00000593582 DUSP14O95147 198 aaKnown RBP11□□□□□ -0.65
TRIM28-203ENST00000593582 S100A11P31949 105 aa11□□□□□ -0.65
TRIM28-203ENST00000593582 TCTAP57738 103 aa11□□□□□ -0.65
TRIM28-203ENST00000593582 HBG1P69891 147 aa11□□□□□ -0.65
TRIM28-203ENST00000593582 HBG2P69892 147 aa11□□□□□ -0.65
TRIM28-203ENST00000593582 Q6ZRG5 221 aa11□□□□□ -0.65
TRIM28-203ENST00000593582 Q6ZTC4 211 aa11□□□□□ -0.65
TRIM28-203ENST00000593582 ZNF738Q8NE65 137 aa11□□□□□ -0.65
TRIM28-203ENST00000593582 TRAV10A0A0B4J240 114 aa10.99□□□□□ -0.65
TRIM28-203ENST00000593582 IGLL5B9A064 214 aa10.99□□□□□ -0.65
TRIM28-203ENST00000593582 CNN1P51911 297 aaKnown RBP10.99□□□□□ -0.65
TRIM28-203ENST00000593582 IFITM3Q01628 133 aa10.99□□□□□ -0.65
TRIM28-203ENST00000593582 C10orf113Q5VZT2 155 aa10.99□□□□□ -0.65
TRIM28-203ENST00000593582 LGALS9CQ6DKI2 356 aa10.99□□□□□ -0.65
TRIM28-203ENST00000593582 NRARPQ7Z6K4 114 aa10.99□□□□□ -0.65
TRIM28-203ENST00000593582 TMEM252Q8N6L7 170 aa10.99□□□□□ -0.65
TRIM28-203ENST00000593582 CELA1Q9UNI1 258 aa10.99□□□□□ -0.65
TRIM28-203ENST00000593582 RFNGQ9Y644 331 aa10.99□□□□□ -0.65
TRIM28-203ENST00000593582 IGSF23A1L1A6 192 aa10.98□□□□□ -0.65
TRIM28-203ENST00000593582 A8MTW9 85 aa10.98□□□□□ -0.65
TRIM28-203ENST00000593582 PRAF2O60831 178 aa10.98□□□□□ -0.65
TRIM28-203ENST00000593582 CXCL3P19876 107 aa10.98□□□□□ -0.65
TRIM28-203ENST00000593582 EMP1P54849 157 aa10.98□□□□□ -0.65
TRIM28-203ENST00000593582 VWC2Q2TAL6 325 aa10.98□□□□□ -0.65
TRIM28-203ENST00000593582 AMTNQ6UX39 209 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms