RNA–Protein interactions for RNA: ENST00000592690.1

LIG3-215, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-215ENST00000592690 HLA-DRB4P13762 266 aa11.46□□□□□ -0.57
LIG3-215ENST00000592690 S100A7P31151 101 aa11.46□□□□□ -0.57
LIG3-215ENST00000592690 MORN3Q6PF18 240 aaPredicted RBP11.46□□□□□ -0.57
LIG3-215ENST00000592690 OR11H2Q8NH07 326 aa11.46□□□□□ -0.57
LIG3-215ENST00000592690 IL17DQ8TAD2 202 aa11.46□□□□□ -0.57
LIG3-215ENST00000592690 C20orf173Q96LM9 149 aa11.46□□□□□ -0.57
LIG3-215ENST00000592690 GPR82Q96P67 336 aa11.46□□□□□ -0.57
LIG3-215ENST00000592690 RARRES2Q99969 163 aa11.46□□□□□ -0.57
LIG3-215ENST00000592690 ARV1Q9H2C2 271 aa11.46□□□□□ -0.57
LIG3-215ENST00000592690 WDR83OSQ9Y284 106 aa11.46□□□□□ -0.57
LIG3-215ENST00000592690 HLA-DRB4X5D2U9 266 aa11.46□□□□□ -0.57
LIG3-215ENST00000592690 SACSQ9NZJ4 4579 aa11.46□□□□□ -0.57
LIG3-215ENST00000592690 TENM2Q9NT68 2774 aa11.45□□□□□ -0.58
LIG3-215ENST00000592690 S100A11P31949 105 aa11.45□□□□□ -0.58
LIG3-215ENST00000592690 CAMLGP49069 296 aa11.45□□□□□ -0.58
LIG3-215ENST00000592690 MEOX2P50222 304 aa11.45□□□□□ -0.58
LIG3-215ENST00000592690 MIC13Q5XKP0 118 aa11.45□□□□□ -0.58
LIG3-215ENST00000592690 PPP1R1CQ8WVI7 109 aa11.45□□□□□ -0.58
LIG3-215ENST00000592690 C16orf92Q96LL3 132 aa11.45□□□□□ -0.58
LIG3-215ENST00000592690 CLEC5AQ9NY25 188 aa11.45□□□□□ -0.58
LIG3-215ENST00000592690 E5RGE8 158 aa11.44□□□□□ -0.58
LIG3-215ENST00000592690 F6UB75 175 aa11.44□□□□□ -0.58
LIG3-215ENST00000592690 RPL7P18124 248 aaKnown RBP11.44□□□□□ -0.58
LIG3-215ENST00000592690 HBG1P69891 147 aa11.44□□□□□ -0.58
LIG3-215ENST00000592690 HBG2P69892 147 aa11.44□□□□□ -0.58
LIG3-215ENST00000592690 CYCSP99999 105 aaKnown RBP11.44□□□□□ -0.58
LIG3-215ENST00000592690 NHLH2Q02577 135 aa11.44□□□□□ -0.58
LIG3-215ENST00000592690 BAXQ07812 192 aa11.44□□□□□ -0.58
LIG3-215ENST00000592690 PXDC1Q5TGL8 231 aa11.44□□□□□ -0.58
LIG3-215ENST00000592690 IGFL4Q6B9Z1 124 aa11.44□□□□□ -0.58
LIG3-215ENST00000592690 FOXI2Q6ZQN5 318 aa11.44□□□□□ -0.58
LIG3-215ENST00000592690 TMEM37Q8WXS4 190 aa11.44□□□□□ -0.58
LIG3-215ENST00000592690 SAV1Q9H4B6 383 aaPredicted RBP11.44□□□□□ -0.58
LIG3-215ENST00000592690 ALG5Q9Y673 324 aa11.44□□□□□ -0.58
LIG3-215ENST00000592690 TRAV8-2A0A0B4J237 113 aa11.43□□□□□ -0.58
LIG3-215ENST00000592690 COX7A2P2O60397 106 aa11.43□□□□□ -0.58
LIG3-215ENST00000592690 PTTG1O95997 202 aa11.43□□□□□ -0.58
LIG3-215ENST00000592690 IGKV3-20P01619 116 aa11.43□□□□□ -0.58
LIG3-215ENST00000592690 RLN2P04090 185 aa11.43□□□□□ -0.58
LIG3-215ENST00000592690 ATF4P18848 351 aaPredicted RBP11.43□□□□□ -0.58
LIG3-215ENST00000592690 FGF7P21781 194 aa11.43□□□□□ -0.58
LIG3-215ENST00000592690 PRR20EP86478 221 aa11.43□□□□□ -0.58
LIG3-215ENST00000592690 PRR20CP86479 221 aa11.43□□□□□ -0.58
LIG3-215ENST00000592690 PRR20DP86480 221 aa11.43□□□□□ -0.58
LIG3-215ENST00000592690 PRR20BP86481 221 aa11.43□□□□□ -0.58
LIG3-215ENST00000592690 PRR20AP86496 221 aa11.43□□□□□ -0.58
LIG3-215ENST00000592690 FGL1Q08830 312 aa11.43□□□□□ -0.58
LIG3-215ENST00000592690 OPCMLQ14982 345 aa11.43□□□□□ -0.58
LIG3-215ENST00000592690 TMEM41BQ5BJD5 291 aa11.43□□□□□ -0.58
LIG3-215ENST00000592690 SAMD13Q5VXD3 122 aa11.43□□□□□ -0.58
LIG3-215ENST00000592690 MORN5Q5VZ52 161 aa11.43□□□□□ -0.58
LIG3-215ENST00000592690 LINC00305Q7Z4B0 112 aa11.43□□□□□ -0.58
LIG3-215ENST00000592690 CSNK1G2-AS1Q8NCQ2 148 aa11.43□□□□□ -0.58
LIG3-215ENST00000592690 RYR2Q92736 4967 aa11.43□□□□□ -0.58
LIG3-215ENST00000592690 MRPS12O15235 138 aaKnown RBP11.42□□□□□ -0.58
LIG3-215ENST00000592690 DEFB4AO15263 64 aa11.42□□□□□ -0.58
LIG3-215ENST00000592690 RAB31Q13636 194 aa11.42□□□□□ -0.58
LIG3-215ENST00000592690 ATP6V1FQ16864 119 aa11.42□□□□□ -0.58
LIG3-215ENST00000592690 RNF182Q8N6D2 247 aa11.42□□□□□ -0.58
LIG3-215ENST00000592690 OR5C1Q8NGR4 320 aa11.42□□□□□ -0.58
LIG3-215ENST00000592690 SLC25A31Q9H0C2 315 aa11.42□□□□□ -0.58
LIG3-215ENST00000592690 RPRMQ9NS64 109 aa11.42□□□□□ -0.58
LIG3-215ENST00000592690 A0A087X0K7 114 aa11.41□□□□□ -0.58
LIG3-215ENST00000592690 A0A0J9YX75 114 aa11.41□□□□□ -0.58
LIG3-215ENST00000592690 MPC2O95563 127 aa11.41□□□□□ -0.58
LIG3-215ENST00000592690 FXYD7P58549 80 aa11.41□□□□□ -0.58
LIG3-215ENST00000592690 PMS2P11Q13670 270 aa11.41□□□□□ -0.58
LIG3-215ENST00000592690 C10orf113Q5VZT2 155 aa11.41□□□□□ -0.58
LIG3-215ENST00000592690 S100A7AQ86SG5 101 aa11.41□□□□□ -0.58
LIG3-215ENST00000592690 RNF126Q9BV68 326 aa11.41□□□□□ -0.58
LIG3-215ENST00000592690 C11orf68Q9H3H3 251 aaKnown RBP11.41□□□□□ -0.58
LIG3-215ENST00000592690 SLC39A9Q9NUM3 307 aa11.41□□□□□ -0.58
LIG3-215ENST00000592690 XCL2Q9UBD3 114 aa11.41□□□□□ -0.58
LIG3-215ENST00000592690 X6R8D5 127 aa11.41□□□□□ -0.58
LIG3-215ENST00000592690 ZNF705EA8MWA4 302 aaPredicted RBP11.4□□□□□ -0.58
LIG3-215ENST00000592690 SNRPCP09234 159 aaKnown RBP11.4□□□□□ -0.58
LIG3-215ENST00000592690 CXCL3P19876 107 aa11.4□□□□□ -0.58
LIG3-215ENST00000592690 HLA-DMBP28068 263 aa11.4□□□□□ -0.58
LIG3-215ENST00000592690 RPL29P47914 159 aaKnown RBP11.4□□□□□ -0.58
LIG3-215ENST00000592690 B2MP61769 119 aa11.4□□□□□ -0.58
LIG3-215ENST00000592690 NUTF2P61970 127 aaKnown RBP11.4□□□□□ -0.58
LIG3-215ENST00000592690 CLINT1Q14677 625 aa11.4□□□□□ -0.58
LIG3-215ENST00000592690 FAM78BQ5VT40 261 aa11.4□□□□□ -0.58
LIG3-215ENST00000592690 EBLN2Q6P2I7 272 aa11.4□□□□□ -0.58
LIG3-215ENST00000592690 Q6ZRG5 221 aa11.4□□□□□ -0.58
LIG3-215ENST00000592690 Q8NAQ8 132 aa11.4□□□□□ -0.58
LIG3-215ENST00000592690 OR4B1Q8NGF8 309 aa11.4□□□□□ -0.58
LIG3-215ENST00000592690 THAP6Q8TBB0 222 aa11.4□□□□□ -0.58
LIG3-215ENST00000592690 SLC35B3Q9H1N7 401 aa11.4□□□□□ -0.58
LIG3-215ENST00000592690 DNAJC4Q9NNZ3 241 aa11.4□□□□□ -0.58
LIG3-215ENST00000592690 PXMP4Q9Y6I8 212 aa11.4□□□□□ -0.58
LIG3-215ENST00000592690 ELOA3CA0A087WX78 387 aaPredicted RBP11.39□□□□□ -0.59
LIG3-215ENST00000592690 CXorf65A6NEN9 183 aa11.39□□□□□ -0.59
LIG3-215ENST00000592690 SPATA31B1PQ5VZV4 182 aa11.39□□□□□ -0.59
LIG3-215ENST00000592690 ZNF709Q8N972 641 aa11.39□□□□□ -0.59
LIG3-215ENST00000592690 CHAC2Q8WUX2 184 aa11.39□□□□□ -0.59
LIG3-215ENST00000592690 CLUHP3Q96NS8 147 aa11.39□□□□□ -0.59
LIG3-215ENST00000592690 C1QTNF4Q9BXJ3 329 aa11.39□□□□□ -0.59
LIG3-215ENST00000592690 NPCDR1Q9BY65 106 aa11.39□□□□□ -0.59
LIG3-215ENST00000592690 MBD2Q9UBB5 411 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms