RNA–Protein interactions for RNA: ENST00000590559.2

CLIP3-204, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 4

Gene CLIP3, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-204ENST00000590559 RAB2BQ8WUD1 216 aa8.24□□□□□ -1.09
CLIP3-204ENST00000590559 GPR82Q96P67 336 aa8.24□□□□□ -1.09
CLIP3-204ENST00000590559 MCUBQ9NWR8 336 aa8.24□□□□□ -1.09
CLIP3-204ENST00000590559 H3BRN7 92 aa8.23□□□□□ -1.09
CLIP3-204ENST00000590559 M0R2Z0 102 aa8.23□□□□□ -1.09
CLIP3-204ENST00000590559 SYNGR2O43760 224 aa8.23□□□□□ -1.09
CLIP3-204ENST00000590559 DUSP14O95147 198 aaKnown RBP8.23□□□□□ -1.09
CLIP3-204ENST00000590559 AZU1P20160 251 aa8.23□□□□□ -1.09
CLIP3-204ENST00000590559 TMBIM6P55061 237 aa8.23□□□□□ -1.09
CLIP3-204ENST00000590559 B2MP61769 119 aa8.23□□□□□ -1.09
CLIP3-204ENST00000590559 SPINK13Q1W4C9 94 aa8.23□□□□□ -1.09
CLIP3-204ENST00000590559 IGFL4Q6B9Z1 124 aa8.23□□□□□ -1.09
CLIP3-204ENST00000590559 ZNRF2Q8NHG8 242 aa8.23□□□□□ -1.09
CLIP3-204ENST00000590559 PPP1R14BQ96C90 147 aa8.23□□□□□ -1.09
CLIP3-204ENST00000590559 CIB3Q96Q77 187 aaPredicted RBP8.23□□□□□ -1.09
CLIP3-204ENST00000590559 SLC25A22Q9H936 323 aa8.23□□□□□ -1.09
CLIP3-204ENST00000590559 TMED3Q9Y3Q3 217 aa8.23□□□□□ -1.09
CLIP3-204ENST00000590559 NBDYA0A0U1RRE5 68 aa8.22□□□□□ -1.09
CLIP3-204ENST00000590559 FABP12A6NFH5 140 aa8.22□□□□□ -1.09
CLIP3-204ENST00000590559 PMS2P5A8MQ11 134 aa8.22□□□□□ -1.09
CLIP3-204ENST00000590559 ZNF705GA8MUZ8 300 aaPredicted RBP8.22□□□□□ -1.09
CLIP3-204ENST00000590559 MED6O75586 246 aa8.22□□□□□ -1.09
CLIP3-204ENST00000590559 CDK2AP2O75956 126 aa8.22□□□□□ -1.09
CLIP3-204ENST00000590559 INSP01308 110 aa8.22□□□□□ -1.09
CLIP3-204ENST00000590559 ORM2P19652 201 aa8.22□□□□□ -1.09
CLIP3-204ENST00000590559 PLP1P60201 277 aa8.22□□□□□ -1.09
CLIP3-204ENST00000590559 TNP2Q05952 138 aa8.22□□□□□ -1.09
CLIP3-204ENST00000590559 TMEM144Q7Z5S9 345 aa8.22□□□□□ -1.09
CLIP3-204ENST00000590559 RNF182Q8N6D2 247 aa8.22□□□□□ -1.09
CLIP3-204ENST00000590559 BPIFCQ8NFQ6 507 aa8.22□□□□□ -1.09
CLIP3-204ENST00000590559 A0A087X0K7 114 aa8.21□□□□□ -1.1
CLIP3-204ENST00000590559 WRBO00258 174 aa8.21□□□□□ -1.1
CLIP3-204ENST00000590559 RPP30P78346 268 aaKnown RBP8.21□□□□□ -1.1
CLIP3-204ENST00000590559 ID3Q02535 119 aa8.21□□□□□ -1.1
CLIP3-204ENST00000590559 PPP1R1AQ13522 171 aa8.21□□□□□ -1.1
CLIP3-204ENST00000590559 TMED4Q7Z7H5 227 aa8.21□□□□□ -1.1
CLIP3-204ENST00000590559 BAP18Q8IXM2 172 aa8.21□□□□□ -1.1
CLIP3-204ENST00000590559 SHANK2-AS3Q9BTD1 123 aa8.21□□□□□ -1.1
CLIP3-204ENST00000590559 TMEM208Q9BTX3 173 aa8.21□□□□□ -1.1
CLIP3-204ENST00000590559 SLC25A39Q9BZJ4 359 aaPredicted RBP8.21□□□□□ -1.1
CLIP3-204ENST00000590559 V9GYH0 126 aa8.21□□□□□ -1.1
CLIP3-204ENST00000590559 TRAV12-2A0A075B6T6 113 aa8.2□□□□□ -1.1
CLIP3-204ENST00000590559 H3BMQ9 156 aa8.2□□□□□ -1.1
CLIP3-204ENST00000590559 BOLA2-SMG1P6H3BVE0 249 aa8.2□□□□□ -1.1
CLIP3-204ENST00000590559 MRPS12O15235 138 aaKnown RBP8.2□□□□□ -1.1
CLIP3-204ENST00000590559 SFT2D2O95562 160 aa8.2□□□□□ -1.1
CLIP3-204ENST00000590559 CXCL3P19876 107 aa8.2□□□□□ -1.1
CLIP3-204ENST00000590559 FCN2Q15485 313 aa8.2□□□□□ -1.1
CLIP3-204ENST00000590559 ACOT7LQ6ZUV0 252 aa8.2□□□□□ -1.1
CLIP3-204ENST00000590559 DEDD2Q8WXF8 326 aa8.2□□□□□ -1.1
CLIP3-204ENST00000590559 SLC25A21Q9BQT8 299 aaPredicted RBP8.2□□□□□ -1.1
CLIP3-204ENST00000590559 TMEM147Q9BVK8 224 aa8.2□□□□□ -1.1
CLIP3-204ENST00000590559 HERC1Q15751 4861 aa8.2□□□□□ -1.1
CLIP3-204ENST00000590559 CBY3A6NI87 242 aa8.19□□□□□ -1.1
CLIP3-204ENST00000590559 VAMP1P23763 118 aa8.19□□□□□ -1.1
CLIP3-204ENST00000590559 FAUP35544 74 aaKnown RBP8.19□□□□□ -1.1
CLIP3-204ENST00000590559 SPANXN5Q5MJ07 72 aa8.19□□□□□ -1.1
CLIP3-204ENST00000590559 PATE2Q6UY27 113 aa8.19□□□□□ -1.1
CLIP3-204ENST00000590559 CYP2G1PQ6ZSU1 146 aa8.19□□□□□ -1.1
CLIP3-204ENST00000590559 TMEM256Q8N2U0 113 aa8.19□□□□□ -1.1
CLIP3-204ENST00000590559 C6orf223Q8N319 242 aa8.19□□□□□ -1.1
CLIP3-204ENST00000590559 OR8A1Q8NGG7 326 aa8.19□□□□□ -1.1
CLIP3-204ENST00000590559 PAIP2BQ9ULR5 123 aaKnown RBP8.19□□□□□ -1.1
CLIP3-204ENST00000590559 STRAPQ9Y3F4 350 aaKnown RBP8.19□□□□□ -1.1
CLIP3-204ENST00000590559 LINC00588Q9Y4M8 146 aa8.19□□□□□ -1.1
CLIP3-204ENST00000590559 H3BP45 60 aa8.18□□□□□ -1.1
CLIP3-204ENST00000590559 K7EPK0 472 aa8.18□□□□□ -1.1
CLIP3-204ENST00000590559 ATP5G1P05496 136 aa8.18□□□□□ -1.1
CLIP3-204ENST00000590559 HOXB5P09067 269 aa8.18□□□□□ -1.1
CLIP3-204ENST00000590559 DEFB130BP0DP73 79 aa8.18□□□□□ -1.1
CLIP3-204ENST00000590559 DEFB130AP0DP74 79 aa8.18□□□□□ -1.1
CLIP3-204ENST00000590559 RPL7P18124 248 aaKnown RBP8.18□□□□□ -1.1
CLIP3-204ENST00000590559 S100A7P31151 101 aa8.18□□□□□ -1.1
CLIP3-204ENST00000590559 ATP5G3P48201 142 aa8.18□□□□□ -1.1
CLIP3-204ENST00000590559 TAS2R60P59551 318 aa8.18□□□□□ -1.1
CLIP3-204ENST00000590559 AP3S2P59780 193 aa8.18□□□□□ -1.1
CLIP3-204ENST00000590559 AKR1C1Q04828 323 aa8.18□□□□□ -1.1
CLIP3-204ENST00000590559 PSG3Q16557 428 aa8.18□□□□□ -1.1
CLIP3-204ENST00000590559 TOMM5Q8N4H5 51 aa8.18□□□□□ -1.1
CLIP3-204ENST00000590559 LINC00612Q8N6U2 182 aa8.18□□□□□ -1.1
CLIP3-204ENST00000590559 RNASE8Q8TDE3 154 aaKnown RBP8.18□□□□□ -1.1
CLIP3-204ENST00000590559 RNF141Q8WVD5 230 aa8.18□□□□□ -1.1
CLIP3-204ENST00000590559 ATG101Q9BSB4 218 aa8.18□□□□□ -1.1
CLIP3-204ENST00000590559 HIGD1AQ9Y241 93 aa8.18□□□□□ -1.1
CLIP3-204ENST00000590559 VPS13BQ7Z7G8 4022 aa8.18□□□□□ -1.1
CLIP3-204ENST00000590559 C16orf90A8MZG2 172 aa8.17□□□□□ -1.1
CLIP3-204ENST00000590559 FNDC10F2Z333 226 aa8.17□□□□□ -1.1
CLIP3-204ENST00000590559 F5H768 121 aa8.17□□□□□ -1.1
CLIP3-204ENST00000590559 HYPMO75409 117 aa8.17□□□□□ -1.1
CLIP3-204ENST00000590559 IL5P05113 134 aa8.17□□□□□ -1.1
CLIP3-204ENST00000590559 UBE2MP61081 183 aaKnown RBP8.17□□□□□ -1.1
CLIP3-204ENST00000590559 SELENOTP62341 195 aa8.17□□□□□ -1.1
CLIP3-204ENST00000590559 POLR2GP62487 172 aaKnown RBP eCLIP8.17□□□□□ -1.1
CLIP3-204ENST00000590559 C4orf46Q504U0 113 aa8.17□□□□□ -1.1
CLIP3-204ENST00000590559 ZNF738Q8NE65 137 aa8.17□□□□□ -1.1
CLIP3-204ENST00000590559 MCFD2Q8NI22 146 aa8.17□□□□□ -1.1
CLIP3-204ENST00000590559 C16orf74Q96GX8 76 aa8.17□□□□□ -1.1
CLIP3-204ENST00000590559 UHRF2Q96PU4 802 aa8.17□□□□□ -1.1
CLIP3-204ENST00000590559 ADAP1O75689 374 aa8.16□□□□□ -1.1
CLIP3-204ENST00000590559 CCNKO75909 580 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms