RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	PSMB3	P49720	205 aa		12.6	□□□□□ -0.39
MBD1-221	ENST00000589867	SNRPD3	P62318	126 aa	Known RBP	12.6	□□□□□ -0.39
MBD1-221	ENST00000589867	PRR20E	P86478	221 aa		12.6	□□□□□ -0.39
MBD1-221	ENST00000589867	PRR20C	P86479	221 aa		12.6	□□□□□ -0.39
MBD1-221	ENST00000589867	PRR20D	P86480	221 aa		12.6	□□□□□ -0.39
MBD1-221	ENST00000589867	PRR20B	P86481	221 aa		12.6	□□□□□ -0.39
MBD1-221	ENST00000589867	PRR20A	P86496	221 aa		12.6	□□□□□ -0.39
MBD1-221	ENST00000589867	NHLH2	Q02577	135 aa		12.6	□□□□□ -0.39
MBD1-221	ENST00000589867	GATAD1	Q8WUU5	269 aa		12.6	□□□□□ -0.39
MBD1-221	ENST00000589867	ARV1	Q9H2C2	271 aa		12.6	□□□□□ -0.39
MBD1-221	ENST00000589867	UQCC1	Q9NVA1	299 aa		12.6	□□□□□ -0.39
MBD1-221	ENST00000589867	HLA-DRB4	X5D2U9	266 aa		12.6	□□□□□ -0.39
MBD1-221	ENST00000589867	ISLR	O14498	428 aa		12.59	□□□□□ -0.39
MBD1-221	ENST00000589867	OR5G3	P0C626	314 aa		12.59	□□□□□ -0.39
MBD1-221	ENST00000589867	LRRC37A5P	Q49AS3	106 aa		12.59	□□□□□ -0.39
MBD1-221	ENST00000589867	MIC13	Q5XKP0	118 aa		12.59	□□□□□ -0.39
MBD1-221	ENST00000589867	ZNF546	Q86UE3	836 aa		12.59	□□□□□ -0.39
MBD1-221	ENST00000589867	PPP1R1C	Q8WVI7	109 aa		12.59	□□□□□ -0.39
MBD1-221	ENST00000589867	LINC00052	Q96N35	136 aa		12.59	□□□□□ -0.39
MBD1-221	ENST00000589867	ALG5	Q9Y673	324 aa		12.59	□□□□□ -0.39
MBD1-221	ENST00000589867	UBE2L5P	A0A1B0GUS4	154 aa		12.58	□□□□□ -0.4
MBD1-221	ENST00000589867		F6UB75	175 aa		12.58	□□□□□ -0.4
MBD1-221	ENST00000589867	SPP1	P10451	314 aa		12.58	□□□□□ -0.4
MBD1-221	ENST00000589867	S100A11	P31949	105 aa		12.58	□□□□□ -0.4
MBD1-221	ENST00000589867	GALR1	P47211	349 aa		12.58	□□□□□ -0.4
MBD1-221	ENST00000589867	CAMLG	P49069	296 aa		12.58	□□□□□ -0.4
MBD1-221	ENST00000589867	RAP2B	P61225	183 aa		12.58	□□□□□ -0.4
MBD1-221	ENST00000589867	OPCML	Q14982	345 aa		12.58	□□□□□ -0.4
MBD1-221	ENST00000589867	IGFL4	Q6B9Z1	124 aa		12.58	□□□□□ -0.4
MBD1-221	ENST00000589867	OR11H2	Q8NH07	326 aa		12.58	□□□□□ -0.4
MBD1-221	ENST00000589867	IL17D	Q8TAD2	202 aa		12.58	□□□□□ -0.4
MBD1-221	ENST00000589867	CHAC2	Q8WUX2	184 aa		12.58	□□□□□ -0.4
MBD1-221	ENST00000589867	RARRES2	Q99969	163 aa		12.58	□□□□□ -0.4
MBD1-221	ENST00000589867	SAV1	Q9H4B6	383 aa	Predicted RBP	12.58	□□□□□ -0.4
MBD1-221	ENST00000589867		E5RGE8	158 aa		12.57	□□□□□ -0.4
MBD1-221	ENST00000589867	SSNA1	O43805	119 aa		12.57	□□□□□ -0.4
MBD1-221	ENST00000589867	PTTG1	O95997	202 aa		12.57	□□□□□ -0.4
MBD1-221	ENST00000589867	CXCL3	P19876	107 aa		12.57	□□□□□ -0.4
MBD1-221	ENST00000589867	CYCS	P99999	105 aa	Known RBP	12.57	□□□□□ -0.4
MBD1-221	ENST00000589867	PXDC1	Q5TGL8	231 aa		12.57	□□□□□ -0.4
MBD1-221	ENST00000589867	MORN3	Q6PF18	240 aa	Predicted RBP	12.57	□□□□□ -0.4
MBD1-221	ENST00000589867	FOXI2	Q6ZQN5	318 aa		12.57	□□□□□ -0.4
MBD1-221	ENST00000589867	GPR82	Q96P67	336 aa		12.57	□□□□□ -0.4
MBD1-221	ENST00000589867	CLEC5A	Q9NY25	188 aa		12.57	□□□□□ -0.4
MBD1-221	ENST00000589867		A0A087X0K7	114 aa		12.56	□□□□□ -0.4
MBD1-221	ENST00000589867		A8MTW9	85 aa		12.56	□□□□□ -0.4
MBD1-221	ENST00000589867	ZNF705E	A8MWA4	302 aa	Predicted RBP	12.56	□□□□□ -0.4
MBD1-221	ENST00000589867	MPC2	O95563	127 aa		12.56	□□□□□ -0.4
MBD1-221	ENST00000589867	ID1	P41134	155 aa		12.56	□□□□□ -0.4
MBD1-221	ENST00000589867	MEOX2	P50222	304 aa		12.56	□□□□□ -0.4
MBD1-221	ENST00000589867	STX12	Q86Y82	276 aa		12.56	□□□□□ -0.4
MBD1-221	ENST00000589867	ZNF709	Q8N972	641 aa		12.56	□□□□□ -0.4
MBD1-221	ENST00000589867		Q8NAQ8	132 aa		12.56	□□□□□ -0.4
MBD1-221	ENST00000589867		X6R8D5	127 aa		12.56	□□□□□ -0.4
MBD1-221	ENST00000589867	RPL7	P18124	248 aa	Known RBP	12.55	□□□□□ -0.4
MBD1-221	ENST00000589867	ATF4	P18848	351 aa	Predicted RBP	12.55	□□□□□ -0.4
MBD1-221	ENST00000589867	HLA-DMB	P28068	263 aa		12.55	□□□□□ -0.4
MBD1-221	ENST00000589867	RPL29	P47914	159 aa	Known RBP	12.55	□□□□□ -0.4
MBD1-221	ENST00000589867	HBG1	P69891	147 aa		12.55	□□□□□ -0.4
MBD1-221	ENST00000589867	HBG2	P69892	147 aa		12.55	□□□□□ -0.4
MBD1-221	ENST00000589867	ATP6V1F	Q16864	119 aa		12.55	□□□□□ -0.4
MBD1-221	ENST00000589867	LINC00305	Q7Z4B0	112 aa		12.55	□□□□□ -0.4
MBD1-221	ENST00000589867	RNF182	Q8N6D2	247 aa		12.55	□□□□□ -0.4
MBD1-221	ENST00000589867	OR5C1	Q8NGR4	320 aa		12.55	□□□□□ -0.4
MBD1-221	ENST00000589867	C16orf92	Q96LL3	132 aa		12.55	□□□□□ -0.4
MBD1-221	ENST00000589867	CLUHP3	Q96NS8	147 aa		12.55	□□□□□ -0.4
MBD1-221	ENST00000589867	TRAV5	A0A0B4J249	113 aa		12.54	□□□□□ -0.4
MBD1-221	ENST00000589867		A0A0J9YX75	114 aa		12.54	□□□□□ -0.4
MBD1-221	ENST00000589867	RLN2	P04090	185 aa		12.54	□□□□□ -0.4
MBD1-221	ENST00000589867	RBMY1A1	P0DJD3	496 aa	Known RBP	12.54	□□□□□ -0.4
MBD1-221	ENST00000589867	RBMY1C	P0DJD4	496 aa		12.54	□□□□□ -0.4
MBD1-221	ENST00000589867	FGF7	P21781	194 aa		12.54	□□□□□ -0.4
MBD1-221	ENST00000589867	BAX	Q07812	192 aa		12.54	□□□□□ -0.4
MBD1-221	ENST00000589867	RBMY1F	Q15415	496 aa	Known RBP	12.54	□□□□□ -0.4
MBD1-221	ENST00000589867	OR11H7	Q8NGC8	314 aa		12.54	□□□□□ -0.4
MBD1-221	ENST00000589867	SLC39A9	Q9NUM3	307 aa		12.54	□□□□□ -0.4
MBD1-221	ENST00000589867	DEFB4A	O15263	64 aa		12.53	□□□□□ -0.4
MBD1-221	ENST00000589867	COX7A2P2	O60397	106 aa		12.53	□□□□□ -0.4
MBD1-221	ENST00000589867	IGKV3-20	P01619	116 aa		12.53	□□□□□ -0.4
MBD1-221	ENST00000589867	SNRPC	P09234	159 aa	Known RBP	12.53	□□□□□ -0.4
MBD1-221	ENST00000589867	TMEM41B	Q5BJD5	291 aa		12.53	□□□□□ -0.4
MBD1-221	ENST00000589867	GCSAML	Q5JQS6	135 aa		12.53	□□□□□ -0.4
MBD1-221	ENST00000589867	SAMD13	Q5VXD3	122 aa		12.53	□□□□□ -0.4
MBD1-221	ENST00000589867	AMTN	Q6UX39	209 aa		12.53	□□□□□ -0.4
MBD1-221	ENST00000589867	SLC25A31	Q9H0C2	315 aa		12.53	□□□□□ -0.4
MBD1-221	ENST00000589867	C11orf68	Q9H3H3	251 aa	Known RBP	12.53	□□□□□ -0.4
MBD1-221	ENST00000589867	DNAJC4	Q9NNZ3	241 aa		12.53	□□□□□ -0.4
MBD1-221	ENST00000589867	XCL2	Q9UBD3	114 aa		12.53	□□□□□ -0.4
MBD1-221	ENST00000589867	PXMP4	Q9Y6I8	212 aa		12.53	□□□□□ -0.4
MBD1-221	ENST00000589867	ELOA3C	A0A087WX78	387 aa	Predicted RBP	12.52	□□□□□ -0.41
MBD1-221	ENST00000589867		H3BQ15	152 aa		12.52	□□□□□ -0.41
MBD1-221	ENST00000589867	IGLC2	P0DOY2	106 aa		12.52	□□□□□ -0.41
MBD1-221	ENST00000589867	PRB4	P10163	310 aa	Predicted RBP	12.52	□□□□□ -0.41
MBD1-221	ENST00000589867	S100A7	P31151	101 aa		12.52	□□□□□ -0.41
MBD1-221	ENST00000589867	FXYD7	P58549	80 aa		12.52	□□□□□ -0.41
MBD1-221	ENST00000589867	B2M	P61769	119 aa		12.52	□□□□□ -0.41
MBD1-221	ENST00000589867	FGL1	Q08830	312 aa		12.52	□□□□□ -0.41
MBD1-221	ENST00000589867	RAB31	Q13636	194 aa		12.52	□□□□□ -0.41
MBD1-221	ENST00000589867	CLINT1	Q14677	625 aa		12.52	□□□□□ -0.41
MBD1-221	ENST00000589867	FCN2	Q15485	313 aa		12.52	□□□□□ -0.41

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