RNA–Protein interactions for RNA: ENST00000588423.1

RETREG3-206, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-206ENST00000588423 ACTL10Q5JWF8 245 aa11.77□□□□□ -0.53
RETREG3-206ENST00000588423 CASC10Q5T4H9 136 aa11.77□□□□□ -0.53
RETREG3-206ENST00000588423 IL17DQ8TAD2 202 aa11.77□□□□□ -0.53
RETREG3-206ENST00000588423 PPP1R1CQ8WVI7 109 aa11.77□□□□□ -0.53
RETREG3-206ENST00000588423 SCRT1Q9BWW7 348 aa11.77□□□□□ -0.53
RETREG3-206ENST00000588423 ARV1Q9H2C2 271 aa11.77□□□□□ -0.53
RETREG3-206ENST00000588423 OR5AC2Q9NZP5 309 aa11.77□□□□□ -0.53
RETREG3-206ENST00000588423 ELOA3CA0A087WX78 387 aaPredicted RBP11.76□□□□□ -0.53
RETREG3-206ENST00000588423 H0YIZ8 118 aa11.76□□□□□ -0.53
RETREG3-206ENST00000588423 BAXQ07812 192 aa11.76□□□□□ -0.53
RETREG3-206ENST00000588423 LRRC37A5PQ49AS3 106 aa11.76□□□□□ -0.53
RETREG3-206ENST00000588423 PATE2Q6UY27 113 aa11.76□□□□□ -0.53
RETREG3-206ENST00000588423 C17orf77Q96MU5 243 aa11.76□□□□□ -0.53
RETREG3-206ENST00000588423 MED28Q9H204 178 aa11.76□□□□□ -0.53
RETREG3-206ENST00000588423 H3BMM0 161 aa11.75□□□□□ -0.53
RETREG3-206ENST00000588423 MPDU1O75352 247 aa11.75□□□□□ -0.53
RETREG3-206ENST00000588423 HLA-DRB4P13762 266 aa11.75□□□□□ -0.53
RETREG3-206ENST00000588423 ATF4P18848 351 aaPredicted RBP11.75□□□□□ -0.53
RETREG3-206ENST00000588423 RPL29P47914 159 aaKnown RBP11.75□□□□□ -0.53
RETREG3-206ENST00000588423 PRR20EP86478 221 aa11.75□□□□□ -0.53
RETREG3-206ENST00000588423 PRR20CP86479 221 aa11.75□□□□□ -0.53
RETREG3-206ENST00000588423 PRR20DP86480 221 aa11.75□□□□□ -0.53
RETREG3-206ENST00000588423 PRR20BP86481 221 aa11.75□□□□□ -0.53
RETREG3-206ENST00000588423 PRR20AP86496 221 aa11.75□□□□□ -0.53
RETREG3-206ENST00000588423 EWSR1Q01844 656 aaKnown RBP eCLIP11.75□□□□□ -0.53
RETREG3-206ENST00000588423 SPATA31B1PQ5VZV4 182 aa11.75□□□□□ -0.53
RETREG3-206ENST00000588423 UHRF2Q96PU4 802 aa11.75□□□□□ -0.53
RETREG3-206ENST00000588423 RSG1Q9BU20 258 aa11.75□□□□□ -0.53
RETREG3-206ENST00000588423 HLA-DRB4X5D2U9 266 aa11.75□□□□□ -0.53
RETREG3-206ENST00000588423 NBEAL2Q6ZNJ1 2754 aa11.74□□□□□ -0.53
RETREG3-206ENST00000588423 UBE2L5PA0A1B0GUS4 154 aa11.74□□□□□ -0.53
RETREG3-206ENST00000588423 MPC2O95563 127 aa11.74□□□□□ -0.53
RETREG3-206ENST00000588423 GIG44P09565 113 aaPredicted RBP11.74□□□□□ -0.53
RETREG3-206ENST00000588423 NUTF2P61970 127 aaKnown RBP11.74□□□□□ -0.53
RETREG3-206ENST00000588423 NHLH2Q02577 135 aa11.74□□□□□ -0.53
RETREG3-206ENST00000588423 FCN2Q15485 313 aa11.74□□□□□ -0.53
RETREG3-206ENST00000588423 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.74□□□□□ -0.53
RETREG3-206ENST00000588423 FOXI2Q6ZQN5 318 aa11.74□□□□□ -0.53
RETREG3-206ENST00000588423 Q6ZRG5 221 aa11.74□□□□□ -0.53
RETREG3-206ENST00000588423 LINC00305Q7Z4B0 112 aa11.74□□□□□ -0.53
RETREG3-206ENST00000588423 C16orf92Q96LL3 132 aa11.74□□□□□ -0.53
RETREG3-206ENST00000588423 LINC00052Q96N35 136 aa11.74□□□□□ -0.53
RETREG3-206ENST00000588423 CLUHP3Q96NS8 147 aa11.74□□□□□ -0.53
RETREG3-206ENST00000588423 RNF126Q9BV68 326 aa11.74□□□□□ -0.53
RETREG3-206ENST00000588423 SAV1Q9H4B6 383 aaPredicted RBP11.74□□□□□ -0.53
RETREG3-206ENST00000588423 A0A087X0K7 114 aa11.73□□□□□ -0.53
RETREG3-206ENST00000588423 COX7A2P2O60397 106 aa11.73□□□□□ -0.53
RETREG3-206ENST00000588423 OPCMLQ14982 345 aa11.73□□□□□ -0.53
RETREG3-206ENST00000588423 C10orf113Q5VZT2 155 aa11.73□□□□□ -0.53
RETREG3-206ENST00000588423 MIC13Q5XKP0 118 aa11.73□□□□□ -0.53
RETREG3-206ENST00000588423 OR5C1Q8NGR4 320 aa11.73□□□□□ -0.53
RETREG3-206ENST00000588423 OR1L4Q8NGR5 311 aa11.73□□□□□ -0.53
RETREG3-206ENST00000588423 TMEM37Q8WXS4 190 aa11.73□□□□□ -0.53
RETREG3-206ENST00000588423 RARRES2Q99969 163 aa11.73□□□□□ -0.53
RETREG3-206ENST00000588423 RPRMQ9NS64 109 aa11.73□□□□□ -0.53
RETREG3-206ENST00000588423 A0A0J9YWU9 116 aa11.72□□□□□ -0.53
RETREG3-206ENST00000588423 MRPS12O15235 138 aaKnown RBP11.72□□□□□ -0.53
RETREG3-206ENST00000588423 CXCL3P19876 107 aa11.72□□□□□ -0.53
RETREG3-206ENST00000588423 C4BPBP20851 252 aa11.72□□□□□ -0.53
RETREG3-206ENST00000588423 FGF7P21781 194 aa11.72□□□□□ -0.53
RETREG3-206ENST00000588423 B2MP61769 119 aa11.72□□□□□ -0.53
RETREG3-206ENST00000588423 OR11H7Q8NGC8 314 aa11.72□□□□□ -0.53
RETREG3-206ENST00000588423 PFDN5Q99471 154 aa11.72□□□□□ -0.53
RETREG3-206ENST00000588423 C1QTNF4Q9BXJ3 329 aa11.72□□□□□ -0.53
RETREG3-206ENST00000588423 DNAJC4Q9NNZ3 241 aa11.72□□□□□ -0.53
RETREG3-206ENST00000588423 CXCL2P19875 107 aa11.71□□□□□ -0.53
RETREG3-206ENST00000588423 GDF5OSQ5U4N7 250 aa11.71□□□□□ -0.53
RETREG3-206ENST00000588423 EBLN2Q6P2I7 272 aa11.71□□□□□ -0.53
RETREG3-206ENST00000588423 BPIFA4PQ86YQ2 179 aa11.71□□□□□ -0.53
RETREG3-206ENST00000588423 OR11H2Q8NH07 326 aa11.71□□□□□ -0.53
RETREG3-206ENST00000588423 ASB13Q8WXK3 278 aa11.71□□□□□ -0.53
RETREG3-206ENST00000588423 C20orf173Q96LM9 149 aa11.71□□□□□ -0.53
RETREG3-206ENST00000588423 NPCDR1Q9BY65 106 aa11.71□□□□□ -0.53
RETREG3-206ENST00000588423 C11orf68Q9H3H3 251 aaKnown RBP11.71□□□□□ -0.53
RETREG3-206ENST00000588423 SLC39A9Q9NUM3 307 aa11.71□□□□□ -0.53
RETREG3-206ENST00000588423 A0A0J9YX75 114 aa11.7□□□□□ -0.54
RETREG3-206ENST00000588423 CSNK1G2-AS1Q8NCQ2 148 aa11.7□□□□□ -0.54
RETREG3-206ENST00000588423 HSPB11Q9Y547 144 aa11.7□□□□□ -0.54
RETREG3-206ENST00000588423 PXMP4Q9Y6I8 212 aa11.7□□□□□ -0.54
RETREG3-206ENST00000588423 TRAV8-2A0A0B4J237 113 aa11.69□□□□□ -0.54
RETREG3-206ENST00000588423 A8MTW9 85 aa11.69□□□□□ -0.54
RETREG3-206ENST00000588423 ZNF705EA8MWA4 302 aaPredicted RBP11.69□□□□□ -0.54
RETREG3-206ENST00000588423 RPL12P30050 165 aaKnown RBP11.69□□□□□ -0.54
RETREG3-206ENST00000588423 FGL1Q08830 312 aa11.69□□□□□ -0.54
RETREG3-206ENST00000588423 CLINT1Q14677 625 aa11.69□□□□□ -0.54
RETREG3-206ENST00000588423 ZFAND6Q6FIF0 208 aa11.69□□□□□ -0.54
RETREG3-206ENST00000588423 ATP5SQ99766 215 aa11.69□□□□□ -0.54
RETREG3-206ENST00000588423 WDR61Q9GZS3 305 aaKnown RBP11.69□□□□□ -0.54
RETREG3-206ENST00000588423 KCNIP2Q9NS61 270 aa11.69□□□□□ -0.54
RETREG3-206ENST00000588423 MBD2Q9UBB5 411 aa11.69□□□□□ -0.54
RETREG3-206ENST00000588423 A0A1B0GVG6 124 aa11.68□□□□□ -0.54
RETREG3-206ENST00000588423 GIPP09681 153 aaPredicted RBP11.68□□□□□ -0.54
RETREG3-206ENST00000588423 DEFB1P60022 68 aa11.68□□□□□ -0.54
RETREG3-206ENST00000588423 MORN5Q5VZ52 161 aa11.68□□□□□ -0.54
RETREG3-206ENST00000588423 LCN15Q6UWW0 184 aa11.68□□□□□ -0.54
RETREG3-206ENST00000588423 THAP6Q8TBB0 222 aa11.68□□□□□ -0.54
RETREG3-206ENST00000588423 MIFP14174 115 aa11.67□□□□□ -0.54
RETREG3-206ENST00000588423 FAM78BQ5VT40 261 aa11.67□□□□□ -0.54
RETREG3-206ENST00000588423 ZNF709Q8N972 641 aa11.67□□□□□ -0.54
RETREG3-206ENST00000588423 OR4B1Q8NGF8 309 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms