RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 RBMY1FQ15415 496 aaKnown RBP14.18□□□□□ -0.14
TPM4-208ENST00000588410 C2orf50Q96LR7 162 aa14.18□□□□□ -0.14
TPM4-208ENST00000588410 SHANK2-AS3Q9BTD1 123 aa14.18□□□□□ -0.14
TPM4-208ENST00000588410 A6NHS1 94 aa14.17□□□□□ -0.14
TPM4-208ENST00000588410 K7EPK0 472 aa14.17□□□□□ -0.14
TPM4-208ENST00000588410 GOSR2O14653 212 aa14.17□□□□□ -0.14
TPM4-208ENST00000588410 DEDDO75618 318 aa14.17□□□□□ -0.14
TPM4-208ENST00000588410 RPL7P18124 248 aaKnown RBP14.17□□□□□ -0.14
TPM4-208ENST00000588410 FXYD7P58549 80 aa14.17□□□□□ -0.14
TPM4-208ENST00000588410 PLP1P60201 277 aa14.17□□□□□ -0.14
TPM4-208ENST00000588410 FGL1Q08830 312 aa14.17□□□□□ -0.14
TPM4-208ENST00000588410 SLC38A11Q08AI6 406 aa14.17□□□□□ -0.14
TPM4-208ENST00000588410 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.17□□□□□ -0.14
TPM4-208ENST00000588410 ZNF546Q86UE3 836 aa14.17□□□□□ -0.14
TPM4-208ENST00000588410 ENKURQ8TC29 256 aa14.17□□□□□ -0.14
TPM4-208ENST00000588410 HRH4Q9H3N8 390 aa14.17□□□□□ -0.14
TPM4-208ENST00000588410 RNF24Q9Y225 148 aa14.17□□□□□ -0.14
TPM4-208ENST00000588410 S100A10P60903 97 aa14.16□□□□□ -0.14
TPM4-208ENST00000588410 ARL16Q0P5N6 197 aa14.16□□□□□ -0.14
TPM4-208ENST00000588410 CLUHP3Q96NS8 147 aa14.16□□□□□ -0.14
TPM4-208ENST00000588410 ARL6Q9H0F7 186 aa14.16□□□□□ -0.14
TPM4-208ENST00000588410 F6UB75 175 aa14.15□□□□□ -0.14
TPM4-208ENST00000588410 UPK1BO75841 260 aa14.15□□□□□ -0.14
TPM4-208ENST00000588410 PSG9Q00887 426 aa14.15□□□□□ -0.14
TPM4-208ENST00000588410 PXDC1Q5TGL8 231 aa14.15□□□□□ -0.14
TPM4-208ENST00000588410 FAM78BQ5VT40 261 aa14.15□□□□□ -0.14
TPM4-208ENST00000588410 C20orf173Q96LM9 149 aa14.15□□□□□ -0.14
TPM4-208ENST00000588410 UHRF2Q96PU4 802 aa14.15□□□□□ -0.14
TPM4-208ENST00000588410 LYSTQ99698 3801 aa14.15□□□□□ -0.14
TPM4-208ENST00000588410 GPN1Q9HCN4 374 aaPredicted RBP14.15□□□□□ -0.14
TPM4-208ENST00000588410 PTTG2Q9NZH5 202 aa14.15□□□□□ -0.14
TPM4-208ENST00000588410 DNAH1Q9P2D7 4330 aa14.15□□□□□ -0.14
TPM4-208ENST00000588410 PLECQ15149 4684 aaKnown RBP14.15□□□□□ -0.14
TPM4-208ENST00000588410 A0A0J9YX75 114 aa14.14□□□□□ -0.15
TPM4-208ENST00000588410 C11orf94C9JXX5 98 aa14.14□□□□□ -0.15
TPM4-208ENST00000588410 AGPAT2O15120 278 aa14.14□□□□□ -0.15
TPM4-208ENST00000588410 HLA-DMBP28068 263 aa14.14□□□□□ -0.15
TPM4-208ENST00000588410 RAB31Q13636 194 aa14.14□□□□□ -0.15
TPM4-208ENST00000588410 LRRC20Q8TCA0 184 aa14.14□□□□□ -0.15
TPM4-208ENST00000588410 C2CD4CQ8TF44 421 aa14.14□□□□□ -0.15
TPM4-208ENST00000588410 ARV1Q9H2C2 271 aa14.14□□□□□ -0.15
TPM4-208ENST00000588410 IGHV3OR16-12A0A075B7B8 117 aa14.13□□□□□ -0.15
TPM4-208ENST00000588410 ELOA3CA0A087WX78 387 aaPredicted RBP14.13□□□□□ -0.15
TPM4-208ENST00000588410 FAM24AA6NFZ4 105 aa14.13□□□□□ -0.15
TPM4-208ENST00000588410 CST7O76096 145 aa14.13□□□□□ -0.15
TPM4-208ENST00000588410 C17orf77Q96MU5 243 aa14.13□□□□□ -0.15
TPM4-208ENST00000588410 COX7A2P2O60397 106 aa14.12□□□□□ -0.15
TPM4-208ENST00000588410 DUSP14O95147 198 aaKnown RBP14.12□□□□□ -0.15
TPM4-208ENST00000588410 IGFL4Q6B9Z1 124 aa14.12□□□□□ -0.15
TPM4-208ENST00000588410 ZNF709Q8N972 641 aa14.12□□□□□ -0.15
TPM4-208ENST00000588410 SLC35B3Q9H1N7 401 aa14.12□□□□□ -0.15
TPM4-208ENST00000588410 UQCC1Q9NVA1 299 aa14.12□□□□□ -0.15
TPM4-208ENST00000588410 GOLT1BQ9Y3E0 138 aa14.12□□□□□ -0.15
TPM4-208ENST00000588410 ALMS1Q8TCU4 4167 aa14.12□□□□□ -0.15
TPM4-208ENST00000588410 SMIM9A6NGZ8 99 aa14.11□□□□□ -0.15
TPM4-208ENST00000588410 RAB32Q13637 225 aa14.11□□□□□ -0.15
TPM4-208ENST00000588410 PATE2Q6UY27 113 aa14.11□□□□□ -0.15
TPM4-208ENST00000588410 ZNF705AQ6ZN79 300 aaPredicted RBP14.11□□□□□ -0.15
TPM4-208ENST00000588410 LINC00305Q7Z4B0 112 aa14.11□□□□□ -0.15
TPM4-208ENST00000588410 STX12Q86Y82 276 aa14.11□□□□□ -0.15
TPM4-208ENST00000588410 RNF182Q8N6D2 247 aa14.11□□□□□ -0.15
TPM4-208ENST00000588410 ZNF738Q8NE65 137 aa14.11□□□□□ -0.15
TPM4-208ENST00000588410 NEU1Q99519 415 aa14.11□□□□□ -0.15
TPM4-208ENST00000588410 MGST2Q99735 147 aa14.11□□□□□ -0.15
TPM4-208ENST00000588410 TRAV8-2A0A0B4J237 113 aa14.1□□□□□ -0.15
TPM4-208ENST00000588410 IGLL5B9A064 214 aa14.1□□□□□ -0.15
TPM4-208ENST00000588410 S100A11P31949 105 aa14.1□□□□□ -0.15
TPM4-208ENST00000588410 CAMLGP49069 296 aa14.1□□□□□ -0.15
TPM4-208ENST00000588410 SULT1A1P50225 295 aa14.1□□□□□ -0.15
TPM4-208ENST00000588410 Q6ZRG5 221 aa14.1□□□□□ -0.15
TPM4-208ENST00000588410 C11orf1Q9H5F2 150 aa14.1□□□□□ -0.15
TPM4-208ENST00000588410 LYRM2Q9NU23 88 aaPredicted RBP14.1□□□□□ -0.15
TPM4-208ENST00000588410 A0A087X0K7 114 aa14.09□□□□□ -0.15
TPM4-208ENST00000588410 TRAV10A0A0B4J240 114 aa14.09□□□□□ -0.15
TPM4-208ENST00000588410 TMEM189A5PLL7 270 aa14.09□□□□□ -0.15
TPM4-208ENST00000588410 ZNF705FA8MVS1 300 aaPredicted RBP14.09□□□□□ -0.15
TPM4-208ENST00000588410 ZNF705DP0CH99 300 aaPredicted RBP14.09□□□□□ -0.15
TPM4-208ENST00000588410 ZNF705BP0CI00 300 aaPredicted RBP14.09□□□□□ -0.15
TPM4-208ENST00000588410 EMP1P54849 157 aa14.09□□□□□ -0.15
TPM4-208ENST00000588410 TCTAP57738 103 aa14.09□□□□□ -0.15
TPM4-208ENST00000588410 HBG1P69891 147 aa14.09□□□□□ -0.15
TPM4-208ENST00000588410 HBG2P69892 147 aa14.09□□□□□ -0.15
TPM4-208ENST00000588410 IL15RAQ13261 267 aa14.09□□□□□ -0.15
TPM4-208ENST00000588410 Q6ZTC4 211 aa14.09□□□□□ -0.15
TPM4-208ENST00000588410 NRARPQ7Z6K4 114 aa14.09□□□□□ -0.15
TPM4-208ENST00000588410 RFNGQ9Y644 331 aa14.09□□□□□ -0.15
TPM4-208ENST00000588410 PRAF2O60831 178 aa14.08□□□□□ -0.16
TPM4-208ENST00000588410 AMBPP02760 352 aa14.08□□□□□ -0.16
TPM4-208ENST00000588410 CNN1P51911 297 aaKnown RBP14.08□□□□□ -0.16
TPM4-208ENST00000588410 C10orf113Q5VZT2 155 aa14.08□□□□□ -0.16
TPM4-208ENST00000588410 LGALS9CQ6DKI2 356 aa14.08□□□□□ -0.16
TPM4-208ENST00000588410 TMEM252Q8N6L7 170 aa14.08□□□□□ -0.16
TPM4-208ENST00000588410 TMEM208Q9BTX3 173 aa14.08□□□□□ -0.16
TPM4-208ENST00000588410 CELA1Q9UNI1 258 aa14.08□□□□□ -0.16
TPM4-208ENST00000588410 WDR83OSQ9Y284 106 aa14.08□□□□□ -0.16
TPM4-208ENST00000588410 HYDINQ4G0P3 5121 aa14.07□□□□□ -0.16
TPM4-208ENST00000588410 AGRNO00468 2067 aa14.07□□□□□ -0.16
TPM4-208ENST00000588410 IGSF23A1L1A6 192 aa14.07□□□□□ -0.16
TPM4-208ENST00000588410 INMT-MINDY4F8WBC2 141 aa14.07□□□□□ -0.16
TPM4-208ENST00000588410 HBE1P02100 147 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms