RNA–Protein interactions for RNA: ENST00000587220.5

ZNF540-205, Transcript of zinc finger protein 540, humanhuman

TSL 2

Gene ZNF540, Length 576 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-205ENST00000587220 TMEM56-RWDD3S4R434 201 aa7.87□□□□□ -1.15
ZNF540-205ENST00000587220 PITX3O75364 302 aa7.86□□□□□ -1.15
ZNF540-205ENST00000587220 NXPH3O95157 252 aa7.86□□□□□ -1.15
ZNF540-205ENST00000587220 RAB5BP61020 215 aa7.86□□□□□ -1.15
ZNF540-205ENST00000587220 BAXQ07812 192 aa7.86□□□□□ -1.15
ZNF540-205ENST00000587220 MLANAQ16655 118 aa7.86□□□□□ -1.15
ZNF540-205ENST00000587220 LEMD1Q68G75 181 aa7.86□□□□□ -1.15
ZNF540-205ENST00000587220 PVRIGQ6DKI7 326 aa7.86□□□□□ -1.15
ZNF540-205ENST00000587220 SELENOHQ8IZQ5 122 aaKnown RBP7.86□□□□□ -1.15
ZNF540-205ENST00000587220 SLC24A4Q8NFF2 622 aa7.86□□□□□ -1.15
ZNF540-205ENST00000587220 STXBP6Q8NFX7 210 aa7.86□□□□□ -1.15
ZNF540-205ENST00000587220 OR52E5Q8NH55 327 aa7.86□□□□□ -1.15
ZNF540-205ENST00000587220 GATAD1Q8WUU5 269 aa7.86□□□□□ -1.15
ZNF540-205ENST00000587220 SLC25A31Q9H0C2 315 aa7.86□□□□□ -1.15
ZNF540-205ENST00000587220 C11orf1Q9H5F2 150 aa7.86□□□□□ -1.15
ZNF540-205ENST00000587220 FNDC4Q9H6D8 234 aaPredicted RBP7.86□□□□□ -1.15
ZNF540-205ENST00000587220 KLK5Q9Y337 293 aaPredicted RBP7.86□□□□□ -1.15
ZNF540-205ENST00000587220 HYDINQ4G0P3 5121 aa7.85□□□□□ -1.15
ZNF540-205ENST00000587220 TRAV2A0A0B4J234 112 aa7.85□□□□□ -1.15
ZNF540-205ENST00000587220 LY6G6CO95867 125 aa7.85□□□□□ -1.15
ZNF540-205ENST00000587220 CA1P00915 261 aaPredicted RBP7.85□□□□□ -1.15
ZNF540-205ENST00000587220 MT-ND4LP03901 98 aa7.85□□□□□ -1.15
ZNF540-205ENST00000587220 S100A8P05109 93 aa7.85□□□□□ -1.15
ZNF540-205ENST00000587220 DEFB131AP59861 70 aa7.85□□□□□ -1.15
ZNF540-205ENST00000587220 SRSF3P84103 164 aaKnown RBP7.85□□□□□ -1.15
ZNF540-205ENST00000587220 EWSR1Q01844 656 aaKnown RBP eCLIP7.85□□□□□ -1.15
ZNF540-205ENST00000587220 BSXQ3C1V8 233 aa7.85□□□□□ -1.15
ZNF540-205ENST00000587220 TIGITQ495A1 244 aa7.85□□□□□ -1.15
ZNF540-205ENST00000587220 AARDQ4LEZ3 155 aa7.85□□□□□ -1.15
ZNF540-205ENST00000587220 ETFRF1Q6IPR1 90 aa7.85□□□□□ -1.15
ZNF540-205ENST00000587220 STHQ8IWL8 128 aa7.85□□□□□ -1.15
ZNF540-205ENST00000587220 LILRB2Q8N423 598 aa7.85□□□□□ -1.15
ZNF540-205ENST00000587220 RNASEH2CQ8TDP1 164 aaKnown RBP7.85□□□□□ -1.15
ZNF540-205ENST00000587220 Q8WTZ3 238 aa7.85□□□□□ -1.15
ZNF540-205ENST00000587220 GPR146Q96CH1 333 aa7.85□□□□□ -1.15
ZNF540-205ENST00000587220 GNPNAT1Q96EK6 184 aaPredicted RBP7.85□□□□□ -1.15
ZNF540-205ENST00000587220 RARRES2Q99969 163 aa7.85□□□□□ -1.15
ZNF540-205ENST00000587220 MRPL36Q9P0J6 103 aaKnown RBP7.85□□□□□ -1.15
ZNF540-205ENST00000587220 LSM5Q9Y4Y9 91 aaKnown RBP7.85□□□□□ -1.15
ZNF540-205ENST00000587220 DNAH1Q9P2D7 4330 aa7.84□□□□□ -1.15
ZNF540-205ENST00000587220 COLCA2A8K830 154 aa7.84□□□□□ -1.15
ZNF540-205ENST00000587220 IFNA10P01566 189 aa7.84□□□□□ -1.15
ZNF540-205ENST00000587220 NPY1RP25929 384 aa7.84□□□□□ -1.15
ZNF540-205ENST00000587220 OR10J1P30954 320 aa7.84□□□□□ -1.15
ZNF540-205ENST00000587220 RND2P52198 227 aa7.84□□□□□ -1.15
ZNF540-205ENST00000587220 C2orf83Q53S99 150 aa7.84□□□□□ -1.15
ZNF540-205ENST00000587220 CEMP1Q6PRD7 247 aaPredicted RBP7.84□□□□□ -1.15
ZNF540-205ENST00000587220 CBLN2Q8IUK8 224 aa7.84□□□□□ -1.15
ZNF540-205ENST00000587220 OR11H2Q8NH07 326 aa7.84□□□□□ -1.15
ZNF540-205ENST00000587220 LINC00476Q8WZB0 136 aa7.84□□□□□ -1.15
ZNF540-205ENST00000587220 TCEAL7Q9BRU2 100 aa7.84□□□□□ -1.15
ZNF540-205ENST00000587220 SCRT1Q9BWW7 348 aa7.84□□□□□ -1.15
ZNF540-205ENST00000587220 PRR13Q9NZ81 148 aa7.84□□□□□ -1.15
ZNF540-205ENST00000587220 EPPK1P58107 5090 aaKnown RBP7.83□□□□□ -1.16
ZNF540-205ENST00000587220 HELTA6NFD8 242 aa7.83□□□□□ -1.16
ZNF540-205ENST00000587220 ZNF98A6NK75 572 aa7.83□□□□□ -1.16
ZNF540-205ENST00000587220 C1orf196B1AJZ1 125 aa7.83□□□□□ -1.16
ZNF540-205ENST00000587220 NDUFS6O75380 124 aaKnown RBP7.83□□□□□ -1.16
ZNF540-205ENST00000587220 IGKV1-17P01599 117 aa7.83□□□□□ -1.16
ZNF540-205ENST00000587220 SMIM6P0DI80 62 aa7.83□□□□□ -1.16
ZNF540-205ENST00000587220 CRYBB3P26998 211 aa7.83□□□□□ -1.16
ZNF540-205ENST00000587220 CAMLGP49069 296 aa7.83□□□□□ -1.16
ZNF540-205ENST00000587220 CTAG1AP78358 180 aa7.83□□□□□ -1.16
ZNF540-205ENST00000587220 AKR1C1Q04828 323 aa7.83□□□□□ -1.16
ZNF540-205ENST00000587220 GUK1Q16774 197 aa7.83□□□□□ -1.16
ZNF540-205ENST00000587220 TMEM88Q6PEY1 159 aa7.83□□□□□ -1.16
ZNF540-205ENST00000587220 LYZL2Q7Z4W2 148 aa7.83□□□□□ -1.16
ZNF540-205ENST00000587220 FAM24BQ8N5W8 94 aa7.83□□□□□ -1.16
ZNF540-205ENST00000587220 RXFP4Q8TDU9 374 aa7.83□□□□□ -1.16
ZNF540-205ENST00000587220 ACY3Q96HD9 319 aa7.83□□□□□ -1.16
ZNF540-205ENST00000587220 SLC35B3Q9H1N7 401 aa7.83□□□□□ -1.16
ZNF540-205ENST00000587220 SAV1Q9H4B6 383 aaPredicted RBP7.83□□□□□ -1.16
ZNF540-205ENST00000587220 LYRM2Q9NU23 88 aaPredicted RBP7.83□□□□□ -1.16
ZNF540-205ENST00000587220 PLA2G2EQ9NZK7 142 aa7.83□□□□□ -1.16
ZNF540-205ENST00000587220 RCL1Q9Y2P8 373 aaKnown RBP7.83□□□□□ -1.16
ZNF540-205ENST00000587220 TRAV1-1A0A0B4J248 108 aa7.82□□□□□ -1.16
ZNF540-205ENST00000587220 HBE1P02100 147 aa7.82□□□□□ -1.16
ZNF540-205ENST00000587220 IL4P05112 153 aa7.82□□□□□ -1.16
ZNF540-205ENST00000587220 ZNF688P0C7X2 276 aa7.82□□□□□ -1.16
ZNF540-205ENST00000587220 IGLC1P0CG04 106 aa7.82□□□□□ -1.16
ZNF540-205ENST00000587220 NKX2-1P43699 371 aaPredicted RBP7.82□□□□□ -1.16
ZNF540-205ENST00000587220 RAB2AP61019 212 aa7.82□□□□□ -1.16
ZNF540-205ENST00000587220 YPEL3P61236 119 aaPredicted RBP7.82□□□□□ -1.16
ZNF540-205ENST00000587220 NMSQ5H8A3 153 aa7.82□□□□□ -1.16
ZNF540-205ENST00000587220 OR10G4Q8NGN3 311 aa7.82□□□□□ -1.16
ZNF540-205ENST00000587220 C11orf45Q8TAV5 145 aa7.82□□□□□ -1.16
ZNF540-205ENST00000587220 DTD1Q8TEA8 209 aa7.82□□□□□ -1.16
ZNF540-205ENST00000587220 PHLDA1Q8WV24 401 aaPredicted RBP7.82□□□□□ -1.16
ZNF540-205ENST00000587220 PARD6GQ9BYG4 376 aaPredicted RBP7.82□□□□□ -1.16
ZNF540-205ENST00000587220 A0A087WWC5 75 aa7.81□□□□□ -1.16
ZNF540-205ENST00000587220 K7EQG2 157 aa7.81□□□□□ -1.16
ZNF540-205ENST00000587220 SCGB1D2O95969 90 aa7.81□□□□□ -1.16
ZNF540-205ENST00000587220 RD3LP0DJH9 198 aa7.81□□□□□ -1.16
ZNF540-205ENST00000587220 ID3Q02535 119 aa7.81□□□□□ -1.16
ZNF540-205ENST00000587220 CLINT1Q14677 625 aa7.81□□□□□ -1.16
ZNF540-205ENST00000587220 TMEM41BQ5BJD5 291 aa7.81□□□□□ -1.16
ZNF540-205ENST00000587220 ACTL10Q5JWF8 245 aa7.81□□□□□ -1.16
ZNF540-205ENST00000587220 MORN3Q6PF18 240 aaPredicted RBP7.81□□□□□ -1.16
ZNF540-205ENST00000587220 SFT2D1Q8WV19 159 aa7.81□□□□□ -1.16
ZNF540-205ENST00000587220 NPIPB3Q92617 1050 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms