RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 ARV1Q9H2C2 271 aa18.16■□□□□ 0.5
TTC39C-209ENST00000584250 KMT2CQ8NEZ4 4911 aaKnown RBP18.15■□□□□ 0.5
TTC39C-209ENST00000584250 CXCL3P19876 107 aa18.15■□□□□ 0.5
TTC39C-209ENST00000584250 CYCSP99999 105 aaKnown RBP18.15■□□□□ 0.5
TTC39C-209ENST00000584250 TMEM37Q8WXS4 190 aa18.15■□□□□ 0.5
TTC39C-209ENST00000584250 E5RGE8 158 aa18.14■□□□□ 0.49
TTC39C-209ENST00000584250 F6UB75 175 aa18.14■□□□□ 0.49
TTC39C-209ENST00000584250 H3BMM0 161 aa18.14■□□□□ 0.49
TTC39C-209ENST00000584250 RLN2P04090 185 aa18.14■□□□□ 0.49
TTC39C-209ENST00000584250 PSMB3P49720 205 aa18.14■□□□□ 0.49
TTC39C-209ENST00000584250 TRAV8-2A0A0B4J237 113 aa18.13■□□□□ 0.49
TTC39C-209ENST00000584250 MPC2O95563 127 aa18.13■□□□□ 0.49
TTC39C-209ENST00000584250 PRR20EP86478 221 aa18.13■□□□□ 0.49
TTC39C-209ENST00000584250 PRR20CP86479 221 aa18.13■□□□□ 0.49
TTC39C-209ENST00000584250 PRR20DP86480 221 aa18.13■□□□□ 0.49
TTC39C-209ENST00000584250 PRR20BP86481 221 aa18.13■□□□□ 0.49
TTC39C-209ENST00000584250 PRR20AP86496 221 aa18.13■□□□□ 0.49
TTC39C-209ENST00000584250 BAXQ07812 192 aa18.13■□□□□ 0.49
TTC39C-209ENST00000584250 CLEC5AQ9NY25 188 aa18.13■□□□□ 0.49
TTC39C-209ENST00000584250 CSMD3Q7Z407 3707 aa18.12■□□□□ 0.49
TTC39C-209ENST00000584250 ISLRO14498 428 aa18.12■□□□□ 0.49
TTC39C-209ENST00000584250 MRPS12O15235 138 aaKnown RBP18.12■□□□□ 0.49
TTC39C-209ENST00000584250 IGKV3-20P01619 116 aa18.12■□□□□ 0.49
TTC39C-209ENST00000584250 SNRPCP09234 159 aaKnown RBP18.12■□□□□ 0.49
TTC39C-209ENST00000584250 FGF7P21781 194 aa18.12■□□□□ 0.49
TTC39C-209ENST00000584250 ID1P41134 155 aa18.12■□□□□ 0.49
TTC39C-209ENST00000584250 HBG1P69891 147 aa18.12■□□□□ 0.49
TTC39C-209ENST00000584250 HBG2P69892 147 aa18.12■□□□□ 0.49
TTC39C-209ENST00000584250 OR5C1Q8NGR4 320 aa18.12■□□□□ 0.49
TTC39C-209ENST00000584250 OR11H2Q8NH07 326 aa18.12■□□□□ 0.49
TTC39C-209ENST00000584250 C16orf92Q96LL3 132 aa18.12■□□□□ 0.49
TTC39C-209ENST00000584250 STARD9Q9P2P6 4700 aa18.12■□□□□ 0.49
TTC39C-209ENST00000584250 PRB4P10163 310 aaPredicted RBP18.11■□□□□ 0.49
TTC39C-209ENST00000584250 HLA-DRB4P13762 266 aa18.11■□□□□ 0.49
TTC39C-209ENST00000584250 FGL1Q08830 312 aa18.11■□□□□ 0.49
TTC39C-209ENST00000584250 OPCMLQ14982 345 aa18.11■□□□□ 0.49
TTC39C-209ENST00000584250 LINC00305Q7Z4B0 112 aa18.11■□□□□ 0.49
TTC39C-209ENST00000584250 RNF182Q8N6D2 247 aa18.11■□□□□ 0.49
TTC39C-209ENST00000584250 THAP6Q8TBB0 222 aa18.11■□□□□ 0.49
TTC39C-209ENST00000584250 GATAD1Q8WUU5 269 aa18.11■□□□□ 0.49
TTC39C-209ENST00000584250 GPR82Q96P67 336 aa18.11■□□□□ 0.49
TTC39C-209ENST00000584250 RARRES2Q99969 163 aa18.11■□□□□ 0.49
TTC39C-209ENST00000584250 HLA-DRB4X5D2U9 266 aa18.11■□□□□ 0.49
TTC39C-209ENST00000584250 COX7A2P2O60397 106 aa18.1■□□□□ 0.49
TTC39C-209ENST00000584250 SPP1P10451 314 aa18.1■□□□□ 0.49
TTC39C-209ENST00000584250 HLA-DMBP28068 263 aa18.1■□□□□ 0.49
TTC39C-209ENST00000584250 CLINT1Q14677 625 aa18.1■□□□□ 0.49
TTC39C-209ENST00000584250 ATP6V1FQ16864 119 aa18.1■□□□□ 0.49
TTC39C-209ENST00000584250 MORN3Q6PF18 240 aaPredicted RBP18.1■□□□□ 0.49
TTC39C-209ENST00000584250 OR11H7Q8NGC8 314 aa18.1■□□□□ 0.49
TTC39C-209ENST00000584250 SLC25A31Q9H0C2 315 aa18.1■□□□□ 0.49
TTC39C-209ENST00000584250 SAV1Q9H4B6 383 aaPredicted RBP18.1■□□□□ 0.49
TTC39C-209ENST00000584250 TRAV5A0A0B4J249 113 aa18.09■□□□□ 0.49
TTC39C-209ENST00000584250 RPL7P18124 248 aaKnown RBP18.09■□□□□ 0.49
TTC39C-209ENST00000584250 MEOX2P50222 304 aa18.09■□□□□ 0.49
TTC39C-209ENST00000584250 FXYD7P58549 80 aa18.09■□□□□ 0.49
TTC39C-209ENST00000584250 FCN2Q15485 313 aa18.09■□□□□ 0.49
TTC39C-209ENST00000584250 PXDC1Q5TGL8 231 aa18.09■□□□□ 0.49
TTC39C-209ENST00000584250 CSNK1G2-AS1Q8NCQ2 148 aa18.09■□□□□ 0.49
TTC39C-209ENST00000584250 SLC39A9Q9NUM3 307 aa18.09■□□□□ 0.49
TTC39C-209ENST00000584250 MBD2Q9UBB5 411 aa18.09■□□□□ 0.49
TTC39C-209ENST00000584250 DEFB4AO15263 64 aa18.08■□□□□ 0.48
TTC39C-209ENST00000584250 ATF4P18848 351 aaPredicted RBP18.08■□□□□ 0.48
TTC39C-209ENST00000584250 RPL29P47914 159 aaKnown RBP18.08■□□□□ 0.48
TTC39C-209ENST00000584250 RAB31Q13636 194 aa18.08■□□□□ 0.48
TTC39C-209ENST00000584250 RGS21Q2M5E4 152 aa18.08■□□□□ 0.48
TTC39C-209ENST00000584250 C10orf113Q5VZT2 155 aa18.08■□□□□ 0.48
TTC39C-209ENST00000584250 FOXI2Q6ZQN5 318 aa18.08■□□□□ 0.48
TTC39C-209ENST00000584250 IL17DQ8TAD2 202 aa18.08■□□□□ 0.48
TTC39C-209ENST00000584250 PXMP4Q9Y6I8 212 aa18.08■□□□□ 0.48
TTC39C-209ENST00000584250 H3BTX0 84 aa18.07■□□□□ 0.48
TTC39C-209ENST00000584250 S100A7P31151 101 aa18.07■□□□□ 0.48
TTC39C-209ENST00000584250 B2MP61769 119 aa18.07■□□□□ 0.48
TTC39C-209ENST00000584250 GCSAMLQ5JQS6 135 aa18.07■□□□□ 0.48
TTC39C-209ENST00000584250 DNAJC4Q9NNZ3 241 aa18.07■□□□□ 0.48
TTC39C-209ENST00000584250 XCL2Q9UBD3 114 aa18.07■□□□□ 0.48
TTC39C-209ENST00000584250 A0A087X0K7 114 aa18.06■□□□□ 0.48
TTC39C-209ENST00000584250 A0A0J9YX75 114 aa18.06■□□□□ 0.48
TTC39C-209ENST00000584250 OR4B1Q8NGF8 309 aa18.06■□□□□ 0.48
TTC39C-209ENST00000584250 CHAC2Q8WUX2 184 aa18.06■□□□□ 0.48
TTC39C-209ENST00000584250 NPCDR1Q9BY65 106 aa18.06■□□□□ 0.48
TTC39C-209ENST00000584250 ZNF705DP0CH99 300 aaPredicted RBP18.05■□□□□ 0.48
TTC39C-209ENST00000584250 ZNF705BP0CI00 300 aaPredicted RBP18.05■□□□□ 0.48
TTC39C-209ENST00000584250 FAM78BQ5VT40 261 aa18.05■□□□□ 0.48
TTC39C-209ENST00000584250 Q6ZRG5 221 aa18.05■□□□□ 0.48
TTC39C-209ENST00000584250 SLC35B3Q9H1N7 401 aa18.05■□□□□ 0.48
TTC39C-209ENST00000584250 RPRMQ9NS64 109 aa18.05■□□□□ 0.48
TTC39C-209ENST00000584250 HSPB11Q9Y547 144 aa18.05■□□□□ 0.48
TTC39C-209ENST00000584250 X6R8D5 127 aa18.05■□□□□ 0.48
TTC39C-209ENST00000584250 ELOA3CA0A087WX78 387 aaPredicted RBP18.04■□□□□ 0.48
TTC39C-209ENST00000584250 ZNF709Q8N972 641 aa18.04■□□□□ 0.48
TTC39C-209ENST00000584250 SMIM3Q9BZL3 60 aa18.04■□□□□ 0.48
TTC39C-209ENST00000584250 MED28Q9H204 178 aa18.04■□□□□ 0.48
TTC39C-209ENST00000584250 TENM2Q9NT68 2774 aa18.04■□□□□ 0.48
TTC39C-209ENST00000584250 H3BQ15 152 aa18.03■□□□□ 0.48
TTC39C-209ENST00000584250 RPL12P30050 165 aaKnown RBP18.03■□□□□ 0.48
TTC39C-209ENST00000584250 SAMD13Q5VXD3 122 aa18.03■□□□□ 0.48
TTC39C-209ENST00000584250 Q8NAQ8 132 aa18.03■□□□□ 0.48
TTC39C-209ENST00000584250 WDR61Q9GZS3 305 aaKnown RBP18.03■□□□□ 0.48
TTC39C-209ENST00000584250 SLC17A3O00476 420 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms