RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 OR5G3P0C626 314 aa11.5□□□□□ -0.57
SKA2-209ENST00000583976 NUP62P37198 522 aaPredicted RBP11.5□□□□□ -0.57
SKA2-209ENST00000583976 MIC13Q5XKP0 118 aa11.5□□□□□ -0.57
SKA2-209ENST00000583976 C16orf54Q6UWD8 224 aa11.5□□□□□ -0.57
SKA2-209ENST00000583976 ZNF546Q86UE3 836 aa11.5□□□□□ -0.57
SKA2-209ENST00000583976 ATP5SQ99766 215 aa11.5□□□□□ -0.57
SKA2-209ENST00000583976 ARL6Q9H0F7 186 aa11.5□□□□□ -0.57
SKA2-209ENST00000583976 PCLOQ9Y6V0 5065 aa11.49□□□□□ -0.57
SKA2-209ENST00000583976 KIR2DL5BA0A0G2JN68 375 aa11.49□□□□□ -0.57
SKA2-209ENST00000583976 KIR2DL5BA0A0G2JPC4 375 aa11.49□□□□□ -0.57
SKA2-209ENST00000583976 OR4C46A6NHA9 309 aa11.49□□□□□ -0.57
SKA2-209ENST00000583976 HYPMO75409 117 aa11.49□□□□□ -0.57
SKA2-209ENST00000583976 KIR2DL5AQ8N109 375 aa11.49□□□□□ -0.57
SKA2-209ENST00000583976 KIR2DL5BQ8NHK3 375 aa11.49□□□□□ -0.57
SKA2-209ENST00000583976 PHLDA1Q8WV24 401 aaPredicted RBP11.49□□□□□ -0.57
SKA2-209ENST00000583976 GLMPQ8WWB7 406 aa11.49□□□□□ -0.57
SKA2-209ENST00000583976 SLC25A22Q9H936 323 aa11.49□□□□□ -0.57
SKA2-209ENST00000583976 MAP6D1Q9H9H5 199 aa11.49□□□□□ -0.57
SKA2-209ENST00000583976 PFDN2Q9UHV9 154 aa11.49□□□□□ -0.57
SKA2-209ENST00000583976 G3V3Q6 166 aa11.48□□□□□ -0.57
SKA2-209ENST00000583976 DNASE2O00115 360 aaPredicted RBP11.48□□□□□ -0.57
SKA2-209ENST00000583976 UBE2CO00762 179 aa11.48□□□□□ -0.57
SKA2-209ENST00000583976 CD5P06127 495 aa11.48□□□□□ -0.57
SKA2-209ENST00000583976 AP2S1P53680 142 aaPredicted RBP11.48□□□□□ -0.57
SKA2-209ENST00000583976 PAFAH1B2P68402 229 aa11.48□□□□□ -0.57
SKA2-209ENST00000583976 LEMD1Q68G75 181 aa11.48□□□□□ -0.57
SKA2-209ENST00000583976 INO80EQ8NBZ0 244 aaPredicted RBP11.48□□□□□ -0.57
SKA2-209ENST00000583976 STXBP6Q8NFX7 210 aa11.48□□□□□ -0.57
SKA2-209ENST00000583976 UHRF2Q96PU4 802 aa11.48□□□□□ -0.57
SKA2-209ENST00000583976 WDR61Q9GZS3 305 aaKnown RBP11.48□□□□□ -0.57
SKA2-209ENST00000583976 MS4A6AQ9H2W1 248 aa11.48□□□□□ -0.57
SKA2-209ENST00000583976 WFDC1Q9HC57 220 aa11.48□□□□□ -0.57
SKA2-209ENST00000583976 HIGD1AQ9Y241 93 aa11.48□□□□□ -0.57
SKA2-209ENST00000583976 KLK5Q9Y337 293 aaPredicted RBP11.48□□□□□ -0.57
SKA2-209ENST00000583976 HELTA6NFD8 242 aa11.47□□□□□ -0.57
SKA2-209ENST00000583976 ZNF98A6NK75 572 aa11.47□□□□□ -0.57
SKA2-209ENST00000583976 IFNA5P01569 189 aa11.47□□□□□ -0.57
SKA2-209ENST00000583976 PLP1P60201 277 aa11.47□□□□□ -0.57
SKA2-209ENST00000583976 OPCMLQ14982 345 aa11.47□□□□□ -0.57
SKA2-209ENST00000583976 PATE2Q6UY27 113 aa11.47□□□□□ -0.57
SKA2-209ENST00000583976 SIGLEC15Q6ZMC9 328 aa11.47□□□□□ -0.57
SKA2-209ENST00000583976 Q6ZRG5 221 aa11.47□□□□□ -0.57
SKA2-209ENST00000583976 OR8I2Q8N0Y5 310 aa11.47□□□□□ -0.57
SKA2-209ENST00000583976 AQP10Q96PS8 301 aa11.47□□□□□ -0.57
SKA2-209ENST00000583976 NPCDR1Q9BY65 106 aa11.47□□□□□ -0.57
SKA2-209ENST00000583976 SLC25A39Q9BZJ4 359 aaPredicted RBP11.47□□□□□ -0.57
SKA2-209ENST00000583976 ARV1Q9H2C2 271 aa11.47□□□□□ -0.57
SKA2-209ENST00000583976 FBXL17Q9UF56 701 aa11.47□□□□□ -0.57
SKA2-209ENST00000583976 TNFSF18Q9UNG2 199 aa11.47□□□□□ -0.57
SKA2-209ENST00000583976 PXMP4Q9Y6I8 212 aa11.47□□□□□ -0.57
SKA2-209ENST00000583976 FAT2Q9NYQ8 4349 aa11.46□□□□□ -0.57
SKA2-209ENST00000583976 COX7A2P2O60397 106 aa11.46□□□□□ -0.57
SKA2-209ENST00000583976 MPDU1O75352 247 aa11.46□□□□□ -0.57
SKA2-209ENST00000583976 ATF4P18848 351 aaPredicted RBP11.46□□□□□ -0.57
SKA2-209ENST00000583976 RPL29P47914 159 aaKnown RBP11.46□□□□□ -0.57
SKA2-209ENST00000583976 NANOS2P60321 138 aaKnown RBP11.46□□□□□ -0.57
SKA2-209ENST00000583976 B2MP61769 119 aa11.46□□□□□ -0.57
SKA2-209ENST00000583976 PRR20EP86478 221 aa11.46□□□□□ -0.57
SKA2-209ENST00000583976 PRR20CP86479 221 aa11.46□□□□□ -0.57
SKA2-209ENST00000583976 PRR20DP86480 221 aa11.46□□□□□ -0.57
SKA2-209ENST00000583976 PRR20BP86481 221 aa11.46□□□□□ -0.57
SKA2-209ENST00000583976 PRR20AP86496 221 aa11.46□□□□□ -0.57
SKA2-209ENST00000583976 ZNF709Q8N972 641 aa11.46□□□□□ -0.57
SKA2-209ENST00000583976 SCGB1C1Q8TD33 95 aa11.46□□□□□ -0.57
SKA2-209ENST00000583976 SCRT1Q9BWW7 348 aa11.46□□□□□ -0.57
SKA2-209ENST00000583976 SLC39A9Q9NUM3 307 aa11.46□□□□□ -0.57
SKA2-209ENST00000583976 DNAH2Q9P225 4427 aa11.46□□□□□ -0.58
SKA2-209ENST00000583976 RNF222A6NCQ9 220 aa11.45□□□□□ -0.58
SKA2-209ENST00000583976 H3BRN7 92 aa11.45□□□□□ -0.58
SKA2-209ENST00000583976 DEFB4AO15263 64 aa11.45□□□□□ -0.58
SKA2-209ENST00000583976 ARPC5O15511 151 aa11.45□□□□□ -0.58
SKA2-209ENST00000583976 PXDC1Q5TGL8 231 aa11.45□□□□□ -0.58
SKA2-209ENST00000583976 C10orf113Q5VZT2 155 aa11.45□□□□□ -0.58
SKA2-209ENST00000583976 LINC00305Q7Z4B0 112 aa11.45□□□□□ -0.58
SKA2-209ENST00000583976 TMEM37Q8WXS4 190 aa11.45□□□□□ -0.58
SKA2-209ENST00000583976 SHANK2-AS3Q9BTD1 123 aa11.45□□□□□ -0.58
SKA2-209ENST00000583976 RSG1Q9BU20 258 aa11.45□□□□□ -0.58
SKA2-209ENST00000583976 SLC25A32Q9H2D1 315 aa11.45□□□□□ -0.58
SKA2-209ENST00000583976 A0A1B0GVG6 124 aa11.44□□□□□ -0.58
SKA2-209ENST00000583976 C17orf112F2Z3M2 114 aa11.44□□□□□ -0.58
SKA2-209ENST00000583976 S100A7P31151 101 aa11.44□□□□□ -0.58
SKA2-209ENST00000583976 C1orf194Q5T5A4 169 aa11.44□□□□□ -0.58
SKA2-209ENST00000583976 FAM24BQ8N5W8 94 aa11.44□□□□□ -0.58
SKA2-209ENST00000583976 ST6GAL2Q96JF0 529 aa11.44□□□□□ -0.58
SKA2-209ENST00000583976 DNAJC4Q9NNZ3 241 aa11.44□□□□□ -0.58
SKA2-209ENST00000583976 RFNGQ9Y644 331 aa11.44□□□□□ -0.58
SKA2-209ENST00000583976 ELOA3CA0A087WX78 387 aaPredicted RBP11.43□□□□□ -0.58
SKA2-209ENST00000583976 GCSAMLQ5JQS6 135 aa11.43□□□□□ -0.58
SKA2-209ENST00000583976 MORN5Q5VZ52 161 aa11.43□□□□□ -0.58
SKA2-209ENST00000583976 S100A7AQ86SG5 101 aa11.43□□□□□ -0.58
SKA2-209ENST00000583976 OR11H4Q8NGC9 324 aa11.43□□□□□ -0.58
SKA2-209ENST00000583976 OR1L4Q8NGR5 311 aa11.43□□□□□ -0.58
SKA2-209ENST00000583976 MFFQ9GZY8 342 aa11.43□□□□□ -0.58
SKA2-209ENST00000583976 CSTL1Q9H114 145 aa11.43□□□□□ -0.58
SKA2-209ENST00000583976 PKHD1P08F94 4074 aa11.42□□□□□ -0.58
SKA2-209ENST00000583976 K7EQG2 157 aa11.42□□□□□ -0.58
SKA2-209ENST00000583976 CA1P00915 261 aaPredicted RBP11.42□□□□□ -0.58
SKA2-209ENST00000583976 GALR1P47211 349 aa11.42□□□□□ -0.58
SKA2-209ENST00000583976 LGALS9CQ6DKI2 356 aa11.42□□□□□ -0.58
SKA2-209ENST00000583976 OR11H2Q8NH07 326 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms