RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 ATF4P18848 351 aaPredicted RBP9.25□□□□□ -0.93
SNORD55-201ENST00000581525 CXCL3P19876 107 aa9.25□□□□□ -0.93
SNORD55-201ENST00000581525 ID1P41134 155 aa9.25□□□□□ -0.93
SNORD55-201ENST00000581525 GALR1P47211 349 aa9.25□□□□□ -0.93
SNORD55-201ENST00000581525 CAMLGP49069 296 aa9.25□□□□□ -0.93
SNORD55-201ENST00000581525 RAP2BP61225 183 aa9.25□□□□□ -0.93
SNORD55-201ENST00000581525 EWSR1Q01844 656 aaKnown RBP eCLIP9.25□□□□□ -0.93
SNORD55-201ENST00000581525 RAB31Q13636 194 aa9.25□□□□□ -0.93
SNORD55-201ENST00000581525 OPCMLQ14982 345 aa9.25□□□□□ -0.93
SNORD55-201ENST00000581525 TMEM41BQ5BJD5 291 aa9.25□□□□□ -0.93
SNORD55-201ENST00000581525 LEMD1Q68G75 181 aa9.25□□□□□ -0.93
SNORD55-201ENST00000581525 MORN3Q6PF18 240 aaPredicted RBP9.25□□□□□ -0.93
SNORD55-201ENST00000581525 STHQ8IWL8 128 aa9.25□□□□□ -0.93
SNORD55-201ENST00000581525 MUC7Q8TAX7 377 aa9.25□□□□□ -0.93
SNORD55-201ENST00000581525 ARV1Q9H2C2 271 aa9.25□□□□□ -0.93
SNORD55-201ENST00000581525 DYNC2H1Q8NCM8 4307 aaKnown RBP9.24□□□□□ -0.93
SNORD55-201ENST00000581525 A8MTW9 85 aa9.24□□□□□ -0.93
SNORD55-201ENST00000581525 H3BMM0 161 aa9.24□□□□□ -0.93
SNORD55-201ENST00000581525 SPP1P10451 314 aa9.24□□□□□ -0.93
SNORD55-201ENST00000581525 RPL7P18124 248 aaKnown RBP9.24□□□□□ -0.93
SNORD55-201ENST00000581525 OXA1LQ15070 435 aa9.24□□□□□ -0.93
SNORD55-201ENST00000581525 PSMG4Q5JS54 123 aa9.24□□□□□ -0.93
SNORD55-201ENST00000581525 SPATA31B1PQ5VZV4 182 aa9.24□□□□□ -0.93
SNORD55-201ENST00000581525 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.24□□□□□ -0.93
SNORD55-201ENST00000581525 PPP1R14BQ96C90 147 aa9.24□□□□□ -0.93
SNORD55-201ENST00000581525 SCRT1Q9BWW7 348 aa9.24□□□□□ -0.93
SNORD55-201ENST00000581525 ARL6Q9H0F7 186 aa9.24□□□□□ -0.93
SNORD55-201ENST00000581525 DNAJC4Q9NNZ3 241 aa9.24□□□□□ -0.93
SNORD55-201ENST00000581525 KNCNA6PVL3 124 aa9.23□□□□□ -0.93
SNORD55-201ENST00000581525 PET100P0DJ07 73 aa9.23□□□□□ -0.93
SNORD55-201ENST00000581525 HLA-DRB4P13762 266 aa9.23□□□□□ -0.93
SNORD55-201ENST00000581525 CSNK1G2-AS1Q8NCQ2 148 aa9.23□□□□□ -0.93
SNORD55-201ENST00000581525 OR11H7Q8NGC8 314 aa9.23□□□□□ -0.93
SNORD55-201ENST00000581525 OR5C1Q8NGR4 320 aa9.23□□□□□ -0.93
SNORD55-201ENST00000581525 ASB13Q8WXK3 278 aa9.23□□□□□ -0.93
SNORD55-201ENST00000581525 RSG1Q9BU20 258 aa9.23□□□□□ -0.93
SNORD55-201ENST00000581525 SAV1Q9H4B6 383 aaPredicted RBP9.23□□□□□ -0.93
SNORD55-201ENST00000581525 HLA-DRB4X5D2U9 266 aa9.23□□□□□ -0.93
SNORD55-201ENST00000581525 TRAV8-2A0A0B4J237 113 aa9.22□□□□□ -0.93
SNORD55-201ENST00000581525 OR5G3P0C626 314 aa9.22□□□□□ -0.93
SNORD55-201ENST00000581525 RGS21Q2M5E4 152 aa9.22□□□□□ -0.93
SNORD55-201ENST00000581525 DEFB135Q30KP9 77 aa9.22□□□□□ -0.93
SNORD55-201ENST00000581525 LRRC37A5PQ49AS3 106 aa9.22□□□□□ -0.93
SNORD55-201ENST00000581525 MIC13Q5XKP0 118 aa9.22□□□□□ -0.93
SNORD55-201ENST00000581525 FOXI2Q6ZQN5 318 aa9.22□□□□□ -0.93
SNORD55-201ENST00000581525 Q6ZRG5 221 aa9.22□□□□□ -0.93
SNORD55-201ENST00000581525 LINC00305Q7Z4B0 112 aa9.22□□□□□ -0.93
SNORD55-201ENST00000581525 UHRF2Q96PU4 802 aa9.22□□□□□ -0.93
SNORD55-201ENST00000581525 SLC25A22Q9H936 323 aa9.22□□□□□ -0.93
SNORD55-201ENST00000581525 DOK5Q9P104 306 aa9.22□□□□□ -0.93
SNORD55-201ENST00000581525 SACSQ9NZJ4 4579 aa9.21□□□□□ -0.93
SNORD55-201ENST00000581525 CXCL2P19875 107 aa9.21□□□□□ -0.94
SNORD55-201ENST00000581525 RPL12P30050 165 aaKnown RBP9.21□□□□□ -0.94
SNORD55-201ENST00000581525 FCN2Q15485 313 aa9.21□□□□□ -0.94
SNORD55-201ENST00000581525 ACTL10Q5JWF8 245 aa9.21□□□□□ -0.94
SNORD55-201ENST00000581525 CASC10Q5T4H9 136 aa9.21□□□□□ -0.94
SNORD55-201ENST00000581525 OR1L4Q8NGR5 311 aa9.21□□□□□ -0.94
SNORD55-201ENST00000581525 C20orf173Q96LM9 149 aa9.21□□□□□ -0.94
SNORD55-201ENST00000581525 PFDN5Q99471 154 aa9.21□□□□□ -0.94
SNORD55-201ENST00000581525 NPCDR1Q9BY65 106 aa9.21□□□□□ -0.94
SNORD55-201ENST00000581525 PARD6GQ9BYG4 376 aaPredicted RBP9.21□□□□□ -0.94
SNORD55-201ENST00000581525 WDR61Q9GZS3 305 aaKnown RBP9.21□□□□□ -0.94
SNORD55-201ENST00000581525 MED28Q9H204 178 aa9.21□□□□□ -0.94
SNORD55-201ENST00000581525 SLC39A9Q9NUM3 307 aa9.21□□□□□ -0.94
SNORD55-201ENST00000581525 HSPB11Q9Y547 144 aa9.21□□□□□ -0.94
SNORD55-201ENST00000581525 AGRNO00468 2067 aa9.2□□□□□ -0.94
SNORD55-201ENST00000581525 PLECQ15149 4684 aaKnown RBP9.2□□□□□ -0.94
SNORD55-201ENST00000581525 A0A0J9YX75 114 aa9.2□□□□□ -0.94
SNORD55-201ENST00000581525 ZNF705EA8MWA4 302 aaPredicted RBP9.2□□□□□ -0.94
SNORD55-201ENST00000581525 COX7A2P2O60397 106 aa9.2□□□□□ -0.94
SNORD55-201ENST00000581525 CA1P00915 261 aaPredicted RBP9.2□□□□□ -0.94
SNORD55-201ENST00000581525 FGF7P21781 194 aa9.2□□□□□ -0.94
SNORD55-201ENST00000581525 B2MP61769 119 aa9.2□□□□□ -0.94
SNORD55-201ENST00000581525 GDF5OSQ5U4N7 250 aa9.2□□□□□ -0.94
SNORD55-201ENST00000581525 MORN5Q5VZ52 161 aa9.2□□□□□ -0.94
SNORD55-201ENST00000581525 C10orf113Q5VZT2 155 aa9.2□□□□□ -0.94
SNORD55-201ENST00000581525 BPIFA4PQ86YQ2 179 aa9.2□□□□□ -0.94
SNORD55-201ENST00000581525 IL17DQ8TAD2 202 aa9.2□□□□□ -0.94
SNORD55-201ENST00000581525 SAT2Q96F10 170 aaPredicted RBP9.2□□□□□ -0.94
SNORD55-201ENST00000581525 C16orf92Q96LL3 132 aa9.2□□□□□ -0.94
SNORD55-201ENST00000581525 RPRMQ9NS64 109 aa9.2□□□□□ -0.94
SNORD55-201ENST00000581525 MBD2Q9UBB5 411 aa9.2□□□□□ -0.94
SNORD55-201ENST00000581525 PXMP4Q9Y6I8 212 aa9.2□□□□□ -0.94
SNORD55-201ENST00000581525 UBE2L5PA0A1B0GUS4 154 aa9.19□□□□□ -0.94
SNORD55-201ENST00000581525 GIPP09681 153 aaPredicted RBP9.19□□□□□ -0.94
SNORD55-201ENST00000581525 IGLC2P0DOY2 106 aa9.19□□□□□ -0.94
SNORD55-201ENST00000581525 C4BPBP20851 252 aa9.19□□□□□ -0.94
SNORD55-201ENST00000581525 NUTF2P61970 127 aaKnown RBP9.19□□□□□ -0.94
SNORD55-201ENST00000581525 ATP5SQ99766 215 aa9.19□□□□□ -0.94
SNORD55-201ENST00000581525 RARRES2Q99969 163 aa9.19□□□□□ -0.94
SNORD55-201ENST00000581525 C11orf68Q9H3H3 251 aaKnown RBP9.19□□□□□ -0.94
SNORD55-201ENST00000581525 HRH4Q9H3N8 390 aa9.19□□□□□ -0.94
SNORD55-201ENST00000581525 LYSTQ99698 3801 aa9.19□□□□□ -0.94
SNORD55-201ENST00000581525 ZNF253O75346 499 aa9.18□□□□□ -0.94
SNORD55-201ENST00000581525 FGL1Q08830 312 aa9.18□□□□□ -0.94
SNORD55-201ENST00000581525 AMTNQ6UX39 209 aa9.18□□□□□ -0.94
SNORD55-201ENST00000581525 ZNF709Q8N972 641 aa9.18□□□□□ -0.94
SNORD55-201ENST00000581525 LINC00052Q96N35 136 aa9.18□□□□□ -0.94
SNORD55-201ENST00000581525 AQP10Q96PS8 301 aa9.18□□□□□ -0.94
SNORD55-201ENST00000581525 C1QTNF4Q9BXJ3 329 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms