RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 MORN5Q5VZ52 161 aa14.69□□□□□ -0.06
SS18-218ENST00000581021 MIC13Q5XKP0 118 aa14.69□□□□□ -0.06
SS18-218ENST00000581021 TMEM37Q8WXS4 190 aa14.69□□□□□ -0.06
SS18-218ENST00000581021 ARV1Q9H2C2 271 aa14.69□□□□□ -0.06
SS18-218ENST00000581021 TRAV8-2A0A0B4J237 113 aa14.68□□□□□ -0.06
SS18-218ENST00000581021 A0A0J9YWU9 116 aa14.68□□□□□ -0.06
SS18-218ENST00000581021 E5RGE8 158 aa14.68□□□□□ -0.06
SS18-218ENST00000581021 H3BMM0 161 aa14.68□□□□□ -0.06
SS18-218ENST00000581021 MRPS12O15235 138 aaKnown RBP14.68□□□□□ -0.06
SS18-218ENST00000581021 S100A11P31949 105 aa14.68□□□□□ -0.06
SS18-218ENST00000581021 GALR1P47211 349 aa14.68□□□□□ -0.06
SS18-218ENST00000581021 CAMLGP49069 296 aa14.68□□□□□ -0.06
SS18-218ENST00000581021 PRR20EP86478 221 aa14.68□□□□□ -0.06
SS18-218ENST00000581021 PRR20CP86479 221 aa14.68□□□□□ -0.06
SS18-218ENST00000581021 PRR20DP86480 221 aa14.68□□□□□ -0.06
SS18-218ENST00000581021 PRR20BP86481 221 aa14.68□□□□□ -0.06
SS18-218ENST00000581021 PRR20AP86496 221 aa14.68□□□□□ -0.06
SS18-218ENST00000581021 LINC00052Q96N35 136 aa14.68□□□□□ -0.06
SS18-218ENST00000581021 F6UB75 175 aa14.67□□□□□ -0.06
SS18-218ENST00000581021 ISLRO14498 428 aa14.67□□□□□ -0.06
SS18-218ENST00000581021 HLA-DRB4P13762 266 aa14.67□□□□□ -0.06
SS18-218ENST00000581021 CYCSP99999 105 aaKnown RBP14.67□□□□□ -0.06
SS18-218ENST00000581021 IGFL4Q6B9Z1 124 aa14.67□□□□□ -0.06
SS18-218ENST00000581021 HLA-DRB4X5D2U9 266 aa14.67□□□□□ -0.06
SS18-218ENST00000581021 TENM2Q9NT68 2774 aa14.66□□□□□ -0.06
SS18-218ENST00000581021 MPC2O95563 127 aa14.66□□□□□ -0.06
SS18-218ENST00000581021 HBG1P69891 147 aa14.66□□□□□ -0.06
SS18-218ENST00000581021 HBG2P69892 147 aa14.66□□□□□ -0.06
SS18-218ENST00000581021 OPCMLQ14982 345 aa14.66□□□□□ -0.06
SS18-218ENST00000581021 OR5C1Q8NGR4 320 aa14.66□□□□□ -0.06
SS18-218ENST00000581021 GATAD1Q8WUU5 269 aa14.66□□□□□ -0.06
SS18-218ENST00000581021 GPR82Q96P67 336 aa14.66□□□□□ -0.06
SS18-218ENST00000581021 SACSQ9NZJ4 4579 aa14.65□□□□□ -0.06
SS18-218ENST00000581021 SPP1P10451 314 aa14.65□□□□□ -0.06
SS18-218ENST00000581021 FGF7P21781 194 aa14.65□□□□□ -0.06
SS18-218ENST00000581021 BAXQ07812 192 aa14.65□□□□□ -0.06
SS18-218ENST00000581021 PXDC1Q5TGL8 231 aa14.65□□□□□ -0.06
SS18-218ENST00000581021 LINC00305Q7Z4B0 112 aa14.65□□□□□ -0.06
SS18-218ENST00000581021 CSNK1G2-AS1Q8NCQ2 148 aa14.65□□□□□ -0.06
SS18-218ENST00000581021 OR11H7Q8NGC8 314 aa14.65□□□□□ -0.06
SS18-218ENST00000581021 C16orf92Q96LL3 132 aa14.65□□□□□ -0.06
SS18-218ENST00000581021 SAV1Q9H4B6 383 aaPredicted RBP14.65□□□□□ -0.06
SS18-218ENST00000581021 CLEC5AQ9NY25 188 aa14.65□□□□□ -0.06
SS18-218ENST00000581021 COX7A2P2O60397 106 aa14.64□□□□□ -0.07
SS18-218ENST00000581021 RLN2P04090 185 aa14.64□□□□□ -0.07
SS18-218ENST00000581021 RPL7P18124 248 aaKnown RBP14.64□□□□□ -0.07
SS18-218ENST00000581021 ID1P41134 155 aa14.64□□□□□ -0.07
SS18-218ENST00000581021 MEOX2P50222 304 aa14.64□□□□□ -0.07
SS18-218ENST00000581021 CLINT1Q14677 625 aa14.64□□□□□ -0.07
SS18-218ENST00000581021 FCN2Q15485 313 aa14.64□□□□□ -0.07
SS18-218ENST00000581021 MORN3Q6PF18 240 aaPredicted RBP14.64□□□□□ -0.07
SS18-218ENST00000581021 FOXI2Q6ZQN5 318 aa14.64□□□□□ -0.07
SS18-218ENST00000581021 RNF182Q8N6D2 247 aa14.64□□□□□ -0.07
SS18-218ENST00000581021 OR11H2Q8NH07 326 aa14.64□□□□□ -0.07
SS18-218ENST00000581021 THAP6Q8TBB0 222 aa14.64□□□□□ -0.07
SS18-218ENST00000581021 CHAC2Q8WUX2 184 aa14.64□□□□□ -0.07
SS18-218ENST00000581021 MBD2Q9UBB5 411 aa14.64□□□□□ -0.07
SS18-218ENST00000581021 A0A087X0K7 114 aa14.63□□□□□ -0.07
SS18-218ENST00000581021 IGKV3-20P01619 116 aa14.63□□□□□ -0.07
SS18-218ENST00000581021 SNRPCP09234 159 aaKnown RBP14.63□□□□□ -0.07
SS18-218ENST00000581021 HLA-DMBP28068 263 aa14.63□□□□□ -0.07
SS18-218ENST00000581021 RPL29P47914 159 aaKnown RBP14.63□□□□□ -0.07
SS18-218ENST00000581021 ATP6V1FQ16864 119 aa14.63□□□□□ -0.07
SS18-218ENST00000581021 RARRES2Q99969 163 aa14.63□□□□□ -0.07
SS18-218ENST00000581021 NPCDR1Q9BY65 106 aa14.63□□□□□ -0.07
SS18-218ENST00000581021 SLC25A31Q9H0C2 315 aa14.63□□□□□ -0.07
SS18-218ENST00000581021 SLC39A9Q9NUM3 307 aa14.63□□□□□ -0.07
SS18-218ENST00000581021 PXMP4Q9Y6I8 212 aa14.63□□□□□ -0.07
SS18-218ENST00000581021 TRAV5A0A0B4J249 113 aa14.62□□□□□ -0.07
SS18-218ENST00000581021 ATF4P18848 351 aaPredicted RBP14.62□□□□□ -0.07
SS18-218ENST00000581021 S100A7P31151 101 aa14.62□□□□□ -0.07
SS18-218ENST00000581021 B2MP61769 119 aa14.62□□□□□ -0.07
SS18-218ENST00000581021 FGL1Q08830 312 aa14.62□□□□□ -0.07
SS18-218ENST00000581021 RAB31Q13636 194 aa14.62□□□□□ -0.07
SS18-218ENST00000581021 GCSAMLQ5JQS6 135 aa14.62□□□□□ -0.07
SS18-218ENST00000581021 C10orf113Q5VZT2 155 aa14.62□□□□□ -0.07
SS18-218ENST00000581021 ZNF709Q8N972 641 aa14.62□□□□□ -0.07
SS18-218ENST00000581021 IL17DQ8TAD2 202 aa14.62□□□□□ -0.07
SS18-218ENST00000581021 A0A0J9YX75 114 aa14.61□□□□□ -0.07
SS18-218ENST00000581021 PRB4P10163 310 aaPredicted RBP14.61□□□□□ -0.07
SS18-218ENST00000581021 PLECQ15149 4684 aaKnown RBP14.61□□□□□ -0.07
SS18-218ENST00000581021 SAMD13Q5VXD3 122 aa14.61□□□□□ -0.07
SS18-218ENST00000581021 DNAJC4Q9NNZ3 241 aa14.61□□□□□ -0.07
SS18-218ENST00000581021 X6R8D5 127 aa14.61□□□□□ -0.07
SS18-218ENST00000581021 ELOA3CA0A087WX78 387 aaPredicted RBP14.6□□□□□ -0.07
SS18-218ENST00000581021 H3BTX0 84 aa14.6□□□□□ -0.07
SS18-218ENST00000581021 DEFB4AO15263 64 aa14.6□□□□□ -0.07
SS18-218ENST00000581021 FXYD7P58549 80 aa14.6□□□□□ -0.07
SS18-218ENST00000581021 FAM78BQ5VT40 261 aa14.6□□□□□ -0.07
SS18-218ENST00000581021 Q8NAQ8 132 aa14.6□□□□□ -0.07
SS18-218ENST00000581021 LYSTQ99698 3801 aa14.6□□□□□ -0.07
SS18-218ENST00000581021 XCL2Q9UBD3 114 aa14.6□□□□□ -0.07
SS18-218ENST00000581021 HSPB11Q9Y547 144 aa14.6□□□□□ -0.07
SS18-218ENST00000581021 H3BQ15 152 aa14.59□□□□□ -0.07
SS18-218ENST00000581021 SLC17A3O00476 420 aa14.59□□□□□ -0.07
SS18-218ENST00000581021 IGLC2P0DOY2 106 aa14.59□□□□□ -0.07
SS18-218ENST00000581021 Q6ZRG5 221 aa14.59□□□□□ -0.07
SS18-218ENST00000581021 WDR61Q9GZS3 305 aaKnown RBP14.59□□□□□ -0.07
SS18-218ENST00000581021 SLC35B3Q9H1N7 401 aa14.59□□□□□ -0.07
SS18-218ENST00000581021 RPRMQ9NS64 109 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms