RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 STPG3Q8N7X2 389 aa14.33□□□□□ -0.12
LIMD2-209ENST00000580222 ZNF709Q8N972 641 aa14.33□□□□□ -0.12
LIMD2-209ENST00000580222 OR1B1Q8NGR6 318 aa14.33□□□□□ -0.12
LIMD2-209ENST00000580222 KCNIP2Q9NS61 270 aa14.33□□□□□ -0.12
LIMD2-209ENST00000580222 DOK5Q9P104 306 aa14.33□□□□□ -0.12
LIMD2-209ENST00000580222 KLK5Q9Y337 293 aaPredicted RBP14.33□□□□□ -0.12
LIMD2-209ENST00000580222 IGHV3OR16-13A0A075B7E8 117 aa14.32□□□□□ -0.12
LIMD2-209ENST00000580222 IGHV3-74A0A0B4J1X5 117 aa14.32□□□□□ -0.12
LIMD2-209ENST00000580222 ORM2P19652 201 aa14.32□□□□□ -0.12
LIMD2-209ENST00000580222 ZFP69Q49AA0 526 aa14.32□□□□□ -0.12
LIMD2-209ENST00000580222 KCNRGQ8N5I3 272 aa14.32□□□□□ -0.12
LIMD2-209ENST00000580222 PPP1R14BQ96C90 147 aa14.32□□□□□ -0.12
LIMD2-209ENST00000580222 PARD6GQ9BYG4 376 aaPredicted RBP14.32□□□□□ -0.12
LIMD2-209ENST00000580222 TMEM231Q9H6L2 316 aa14.32□□□□□ -0.12
LIMD2-209ENST00000580222 SMPXQ9UHP9 88 aa14.32□□□□□ -0.12
LIMD2-209ENST00000580222 PXMP4Q9Y6I8 212 aa14.32□□□□□ -0.12
LIMD2-209ENST00000580222 BORCS7-ASMTA0A0B4J1R7 106 aa14.31□□□□□ -0.12
LIMD2-209ENST00000580222 A0A0D9SG52 128 aa14.31□□□□□ -0.12
LIMD2-209ENST00000580222 TAAR5O14804 337 aa14.31□□□□□ -0.12
LIMD2-209ENST00000580222 C8orf88P0DMB2 117 aa14.31□□□□□ -0.12
LIMD2-209ENST00000580222 CRYBB3P26998 211 aa14.31□□□□□ -0.12
LIMD2-209ENST00000580222 RPL29P47914 159 aaKnown RBP14.31□□□□□ -0.12
LIMD2-209ENST00000580222 B2MP61769 119 aa14.31□□□□□ -0.12
LIMD2-209ENST00000580222 HYLS1Q96M11 299 aa14.31□□□□□ -0.12
LIMD2-209ENST00000580222 RSG1Q9BU20 258 aa14.31□□□□□ -0.12
LIMD2-209ENST00000580222 RHPN1-AS1Q9BWJ2 59 aa14.31□□□□□ -0.12
LIMD2-209ENST00000580222 ARL6Q9H0F7 186 aa14.31□□□□□ -0.12
LIMD2-209ENST00000580222 MLXQ9UH92 298 aa14.31□□□□□ -0.12
LIMD2-209ENST00000580222 PFDN2Q9UHV9 154 aa14.31□□□□□ -0.12
LIMD2-209ENST00000580222 HSPG2P98160 4391 aa14.3□□□□□ -0.12
LIMD2-209ENST00000580222 IGHV3-66A0A0C4DH42 116 aa14.3□□□□□ -0.12
LIMD2-209ENST00000580222 A0A1W2PS18 150 aa14.3□□□□□ -0.12
LIMD2-209ENST00000580222 CHEK1O14757 476 aa14.3□□□□□ -0.12
LIMD2-209ENST00000580222 OR5G3P0C626 314 aa14.3□□□□□ -0.12
LIMD2-209ENST00000580222 CXCL2P19875 107 aa14.3□□□□□ -0.12
LIMD2-209ENST00000580222 RPL7L1Q6DKI1 246 aaKnown RBP14.3□□□□□ -0.12
LIMD2-209ENST00000580222 Q6ZRG5 221 aa14.3□□□□□ -0.12
LIMD2-209ENST00000580222 HSD17B11Q8NBQ5 300 aa14.3□□□□□ -0.12
LIMD2-209ENST00000580222 ST8SIA2Q92186 375 aa14.3□□□□□ -0.12
LIMD2-209ENST00000580222 GRAMD2BQ96HH9 432 aa14.3□□□□□ -0.12
LIMD2-209ENST00000580222 ARPC5LQ9BPX5 153 aa14.3□□□□□ -0.12
LIMD2-209ENST00000580222 SLC39A9Q9NUM3 307 aa14.3□□□□□ -0.12
LIMD2-209ENST00000580222 TECRQ9NZ01 308 aaKnown RBP14.3□□□□□ -0.12
LIMD2-209ENST00000580222 A0A1B0GVY2 172 aa14.29□□□□□ -0.12
LIMD2-209ENST00000580222 KANTRA0A1W2PQU2 76 aa14.29□□□□□ -0.12
LIMD2-209ENST00000580222 COX7A2P2O60397 106 aa14.29□□□□□ -0.12
LIMD2-209ENST00000580222 PFDN1O60925 122 aa14.29□□□□□ -0.12
LIMD2-209ENST00000580222 HYPMO75409 117 aa14.29□□□□□ -0.12
LIMD2-209ENST00000580222 APOHP02749 345 aaPredicted RBP14.29□□□□□ -0.12
LIMD2-209ENST00000580222 PLP1P60201 277 aa14.29□□□□□ -0.12
LIMD2-209ENST00000580222 PXDC1Q5TGL8 231 aa14.29□□□□□ -0.12
LIMD2-209ENST00000580222 WFDC3Q8IUB2 231 aa14.29□□□□□ -0.12
LIMD2-209ENST00000580222 PHLDA1Q8WV24 401 aaPredicted RBP14.29□□□□□ -0.12
LIMD2-209ENST00000580222 HIGD1AQ9Y241 93 aa14.29□□□□□ -0.12
LIMD2-209ENST00000580222 HERC1Q15751 4861 aa14.28□□□□□ -0.12
LIMD2-209ENST00000580222 S100A7P31151 101 aa14.28□□□□□ -0.12
LIMD2-209ENST00000580222 S100A7AQ86SG5 101 aa14.28□□□□□ -0.12
LIMD2-209ENST00000580222 OR1L4Q8NGR5 311 aa14.28□□□□□ -0.12
LIMD2-209ENST00000580222 ARV1Q9H2C2 271 aa14.28□□□□□ -0.12
LIMD2-209ENST00000580222 VSIRQ9H7M9 311 aa14.28□□□□□ -0.12
LIMD2-209ENST00000580222 BCL2L11O43521 198 aa14.27□□□□□ -0.13
LIMD2-209ENST00000580222 MED14OSP0DP75 135 aa14.27□□□□□ -0.13
LIMD2-209ENST00000580222 TMUB2Q71RG4 321 aa14.27□□□□□ -0.13
LIMD2-209ENST00000580222 PFDN5Q99471 154 aa14.27□□□□□ -0.13
LIMD2-209ENST00000580222 RNF2Q99496 336 aa14.27□□□□□ -0.13
LIMD2-209ENST00000580222 U3KQE9 123 aa14.27□□□□□ -0.13
LIMD2-209ENST00000580222 LOC102724200A0A096LPH7 203 aaPredicted RBP14.26□□□□□ -0.13
LIMD2-209ENST00000580222 H3BRN7 92 aa14.26□□□□□ -0.13
LIMD2-209ENST00000580222 FFAR4Q5NUL3 377 aa14.26□□□□□ -0.13
LIMD2-209ENST00000580222 C10orf113Q5VZT2 155 aa14.26□□□□□ -0.13
LIMD2-209ENST00000580222 LAMTOR1Q6IAA8 161 aa14.26□□□□□ -0.13
LIMD2-209ENST00000580222 RBPMS2Q6ZRY4 209 aaKnown RBP14.26□□□□□ -0.13
LIMD2-209ENST00000580222 UHRF2Q96PU4 802 aa14.26□□□□□ -0.13
LIMD2-209ENST00000580222 ZNF471Q9BX82 626 aaPredicted RBP14.26□□□□□ -0.13
LIMD2-209ENST00000580222 TIMM9Q9Y5J7 89 aa14.26□□□□□ -0.13
LIMD2-209ENST00000580222 ELOA3CA0A087WX78 387 aaPredicted RBP14.25□□□□□ -0.13
LIMD2-209ENST00000580222 BUB3O43684 328 aa14.25□□□□□ -0.13
LIMD2-209ENST00000580222 ATP6V0CP27449 155 aa14.25□□□□□ -0.13
LIMD2-209ENST00000580222 C16orf54Q6UWD8 224 aa14.25□□□□□ -0.13
LIMD2-209ENST00000580222 PATE2Q6UY27 113 aa14.25□□□□□ -0.13
LIMD2-209ENST00000580222 TCF24Q7RTU0 167 aa14.25□□□□□ -0.13
LIMD2-209ENST00000580222 TMEM61Q8N0U2 210 aa14.25□□□□□ -0.13
LIMD2-209ENST00000580222 SCRT1Q9BWW7 348 aa14.25□□□□□ -0.13
LIMD2-209ENST00000580222 SLC25A39Q9BZJ4 359 aaPredicted RBP14.25□□□□□ -0.13
LIMD2-209ENST00000580222 SLC25A22Q9H936 323 aa14.25□□□□□ -0.13
LIMD2-209ENST00000580222 CYTL1Q9NRR1 136 aa14.25□□□□□ -0.13
LIMD2-209ENST00000580222 SPRY2O43597 315 aa14.24□□□□□ -0.13
LIMD2-209ENST00000580222 DEFB135Q30KP9 77 aa14.24□□□□□ -0.13
LIMD2-209ENST00000580222 LGALSLQ3ZCW2 172 aaPredicted RBP14.24□□□□□ -0.13
LIMD2-209ENST00000580222 LINC00305Q7Z4B0 112 aa14.24□□□□□ -0.13
LIMD2-209ENST00000580222 GLMPQ8WWB7 406 aa14.24□□□□□ -0.13
LIMD2-209ENST00000580222 GNPNAT1Q96EK6 184 aaPredicted RBP14.24□□□□□ -0.13
LIMD2-209ENST00000580222 PSMG3Q9BT73 122 aaPredicted RBP14.24□□□□□ -0.13
LIMD2-209ENST00000580222 SHANK2-AS3Q9BTD1 123 aa14.24□□□□□ -0.13
LIMD2-209ENST00000580222 DNAJC4Q9NNZ3 241 aa14.24□□□□□ -0.13
LIMD2-209ENST00000580222 RFNGQ9Y644 331 aa14.24□□□□□ -0.13
LIMD2-209ENST00000580222 MUC4Q99102 2169 aa14.23□□□□□ -0.13
LIMD2-209ENST00000580222 IGKV3-7A0A075B6H7 116 aa14.23□□□□□ -0.13
LIMD2-209ENST00000580222 TRAV25A0A0B4J276 109 aa14.23□□□□□ -0.13
LIMD2-209ENST00000580222 ZNF98A6NK75 572 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms