RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 IGHV4-4A0A075B6R2 117 aa9.71□□□□□ -0.86
TRAF4-214ENST00000580073 ZNF705EA8MWA4 302 aaPredicted RBP9.71□□□□□ -0.86
TRAF4-214ENST00000580073 SMLR1H3BR10 107 aa9.71□□□□□ -0.86
TRAF4-214ENST00000580073 NUP62P37198 522 aaPredicted RBP9.71□□□□□ -0.86
TRAF4-214ENST00000580073 SNRPD3P62318 126 aaKnown RBP9.71□□□□□ -0.86
TRAF4-214ENST00000580073 CYP2G1PQ6ZSU1 146 aa9.71□□□□□ -0.86
TRAF4-214ENST00000580073 MGST2Q99735 147 aa9.71□□□□□ -0.86
TRAF4-214ENST00000580073 GGACTQ9BVM4 153 aa9.71□□□□□ -0.86
TRAF4-214ENST00000580073 WFDC1Q9HC57 220 aa9.71□□□□□ -0.86
TRAF4-214ENST00000580073 AMBPP02760 352 aa9.7□□□□□ -0.86
TRAF4-214ENST00000580073 ZNF688P0C7X2 276 aa9.7□□□□□ -0.86
TRAF4-214ENST00000580073 P0DMU3 169 aa9.7□□□□□ -0.86
TRAF4-214ENST00000580073 FAM231AP0DMU4 169 aa9.7□□□□□ -0.86
TRAF4-214ENST00000580073 FAM231CP0DMU5 169 aa9.7□□□□□ -0.86
TRAF4-214ENST00000580073 HLA-DMBP28068 263 aa9.7□□□□□ -0.86
TRAF4-214ENST00000580073 PRR20EP86478 221 aa9.7□□□□□ -0.86
TRAF4-214ENST00000580073 PRR20CP86479 221 aa9.7□□□□□ -0.86
TRAF4-214ENST00000580073 PRR20DP86480 221 aa9.7□□□□□ -0.86
TRAF4-214ENST00000580073 PRR20BP86481 221 aa9.7□□□□□ -0.86
TRAF4-214ENST00000580073 PRR20AP86496 221 aa9.7□□□□□ -0.86
TRAF4-214ENST00000580073 RNF125Q96EQ8 232 aa9.7□□□□□ -0.86
TRAF4-214ENST00000580073 KRTAP17-1Q9BYP8 105 aa9.7□□□□□ -0.86
TRAF4-214ENST00000580073 SLC45A2Q9UMX9 530 aa9.7□□□□□ -0.86
TRAF4-214ENST00000580073 WDR83OSQ9Y284 106 aa9.7□□□□□ -0.86
TRAF4-214ENST00000580073 HERC2O95714 4834 aa9.7□□□□□ -0.86
TRAF4-214ENST00000580073 HECTD4Q9Y4D8 3996 aa9.7□□□□□ -0.86
TRAF4-214ENST00000580073 AGPAT2O15120 278 aa9.69□□□□□ -0.86
TRAF4-214ENST00000580073 HNRNPCP07910 306 aaKnown RBP eCLIP9.69□□□□□ -0.86
TRAF4-214ENST00000580073 LINC00869P0C866 280 aa9.69□□□□□ -0.86
TRAF4-214ENST00000580073 RPL12P30050 165 aaKnown RBP9.69□□□□□ -0.86
TRAF4-214ENST00000580073 S100A11P31949 105 aa9.69□□□□□ -0.86
TRAF4-214ENST00000580073 RAP2BP61225 183 aa9.69□□□□□ -0.86
TRAF4-214ENST00000580073 LYZP61626 148 aa9.69□□□□□ -0.86
TRAF4-214ENST00000580073 ACTL10Q5JWF8 245 aa9.69□□□□□ -0.86
TRAF4-214ENST00000580073 PATE2Q6UY27 113 aa9.69□□□□□ -0.86
TRAF4-214ENST00000580073 Q6ZTC4 211 aa9.69□□□□□ -0.86
TRAF4-214ENST00000580073 FAM24BQ8N5W8 94 aa9.69□□□□□ -0.86
TRAF4-214ENST00000580073 OR5C1Q8NGR4 320 aa9.69□□□□□ -0.86
TRAF4-214ENST00000580073 PBDC1Q9BVG4 233 aa9.69□□□□□ -0.86
TRAF4-214ENST00000580073 TMEM147Q9BVK8 224 aa9.69□□□□□ -0.86
TRAF4-214ENST00000580073 SLC25A31Q9H0C2 315 aa9.69□□□□□ -0.86
TRAF4-214ENST00000580073 SEPSECSQ9HD40 501 aaKnown RBP9.69□□□□□ -0.86
TRAF4-214ENST00000580073 UQCC1Q9NVA1 299 aa9.69□□□□□ -0.86
TRAF4-214ENST00000580073 PFDN2Q9UHV9 154 aa9.69□□□□□ -0.86
TRAF4-214ENST00000580073 HSPB11Q9Y547 144 aa9.69□□□□□ -0.86
TRAF4-214ENST00000580073 DNAH10Q8IVF4 4471 aa9.68□□□□□ -0.86
TRAF4-214ENST00000580073 UBE2L5PA0A1B0GUS4 154 aa9.68□□□□□ -0.86
TRAF4-214ENST00000580073 TEX48A0A1B0GUV7 120 aa9.68□□□□□ -0.86
TRAF4-214ENST00000580073 A0A1B0GVG6 124 aa9.68□□□□□ -0.86
TRAF4-214ENST00000580073 BUB3O43684 328 aa9.68□□□□□ -0.86
TRAF4-214ENST00000580073 C4BPBP20851 252 aa9.68□□□□□ -0.86
TRAF4-214ENST00000580073 CLINT1Q14677 625 aa9.68□□□□□ -0.86
TRAF4-214ENST00000580073 TEPPQ6URK8 271 aa9.68□□□□□ -0.86
TRAF4-214ENST00000580073 C16orf54Q6UWD8 224 aa9.68□□□□□ -0.86
TRAF4-214ENST00000580073 STX12Q86Y82 276 aa9.68□□□□□ -0.86
TRAF4-214ENST00000580073 BPIFCQ8NFQ6 507 aa9.68□□□□□ -0.86
TRAF4-214ENST00000580073 OR2T35Q8NGX2 323 aa9.68□□□□□ -0.86
TRAF4-214ENST00000580073 DCANP1Q8TF63 244 aa9.68□□□□□ -0.86
TRAF4-214ENST00000580073 GLMPQ8WWB7 406 aa9.68□□□□□ -0.86
TRAF4-214ENST00000580073 C17orf77Q96MU5 243 aa9.68□□□□□ -0.86
TRAF4-214ENST00000580073 NDUFAF3Q9BU61 184 aa9.68□□□□□ -0.86
TRAF4-214ENST00000580073 SMIM3Q9BZL3 60 aa9.68□□□□□ -0.86
TRAF4-214ENST00000580073 RFNGQ9Y644 331 aa9.68□□□□□ -0.86
TRAF4-214ENST00000580073 DEFB131BA0A096LNP1 70 aa9.67□□□□□ -0.86
TRAF4-214ENST00000580073 TMEM189A5PLL7 270 aa9.67□□□□□ -0.86
TRAF4-214ENST00000580073 RBMY1A1P0DJD3 496 aaKnown RBP9.67□□□□□ -0.86
TRAF4-214ENST00000580073 RBMY1CP0DJD4 496 aa9.67□□□□□ -0.86
TRAF4-214ENST00000580073 PLP1P60201 277 aa9.67□□□□□ -0.86
TRAF4-214ENST00000580073 RBMY1FQ15415 496 aaKnown RBP9.67□□□□□ -0.86
TRAF4-214ENST00000580073 ATP6V1FQ16864 119 aa9.67□□□□□ -0.86
TRAF4-214ENST00000580073 PSMG4Q5JS54 123 aa9.67□□□□□ -0.86
TRAF4-214ENST00000580073 MIC13Q5XKP0 118 aa9.67□□□□□ -0.86
TRAF4-214ENST00000580073 THAP6Q8TBB0 222 aa9.67□□□□□ -0.86
TRAF4-214ENST00000580073 DOK5Q9P104 306 aa9.67□□□□□ -0.86
TRAF4-214ENST00000580073 X6R8D5 127 aa9.67□□□□□ -0.86
TRAF4-214ENST00000580073 RNF222A6NCQ9 220 aa9.66□□□□□ -0.86
TRAF4-214ENST00000580073 KNCNA6PVL3 124 aa9.66□□□□□ -0.86
TRAF4-214ENST00000580073 PET100P0DJ07 73 aa9.66□□□□□ -0.86
TRAF4-214ENST00000580073 ORM2P19652 201 aa9.66□□□□□ -0.86
TRAF4-214ENST00000580073 FGF7P21781 194 aa9.66□□□□□ -0.86
TRAF4-214ENST00000580073 HBG1P69891 147 aa9.66□□□□□ -0.86
TRAF4-214ENST00000580073 HBG2P69892 147 aa9.66□□□□□ -0.86
TRAF4-214ENST00000580073 BAXQ07812 192 aa9.66□□□□□ -0.86
TRAF4-214ENST00000580073 OPCMLQ14982 345 aa9.66□□□□□ -0.86
TRAF4-214ENST00000580073 OR11H4Q8NGC9 324 aa9.66□□□□□ -0.86
TRAF4-214ENST00000580073 ASB13Q8WXK3 278 aa9.66□□□□□ -0.86
TRAF4-214ENST00000580073 ST6GAL2Q96JF0 529 aa9.66□□□□□ -0.86
TRAF4-214ENST00000580073 NRN1Q9NPD7 142 aa9.66□□□□□ -0.86
TRAF4-214ENST00000580073 VPS13DQ5THJ4 4388 aa9.65□□□□□ -0.86
TRAF4-214ENST00000580073 hCG_2014768A0A024R1R8 64 aa9.65□□□□□ -0.86
TRAF4-214ENST00000580073 FABP1P07148 127 aa9.65□□□□□ -0.86
TRAF4-214ENST00000580073 GIG44P09565 113 aaPredicted RBP9.65□□□□□ -0.86
TRAF4-214ENST00000580073 CAMLGP49069 296 aa9.65□□□□□ -0.86
TRAF4-214ENST00000580073 MORN5Q5VZ52 161 aa9.65□□□□□ -0.86
TRAF4-214ENST00000580073 POM121L12Q8N7R1 296 aa9.65□□□□□ -0.86
TRAF4-214ENST00000580073 OR1B1Q8NGR6 318 aa9.65□□□□□ -0.86
TRAF4-214ENST00000580073 TMEM37Q8WXS4 190 aa9.65□□□□□ -0.86
TRAF4-214ENST00000580073 AQP10Q96PS8 301 aa9.65□□□□□ -0.86
TRAF4-214ENST00000580073 UHRF2Q96PU4 802 aa9.65□□□□□ -0.86
TRAF4-214ENST00000580073 ATP5SQ99766 215 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms