RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-209ENST00000578329 POLR2GP62487 172 aaKnown RBP eCLIP3.09□□□□□ -1.91
PPP4R1-209ENST00000578329 IL18Q14116 193 aa3.09□□□□□ -1.91
PPP4R1-209ENST00000578329 SPINK13Q1W4C9 94 aa3.09□□□□□ -1.91
PPP4R1-209ENST00000578329 TMEM14EPQ6UXP3 125 aa3.09□□□□□ -1.91
PPP4R1-209ENST00000578329 Q6ZRN7 208 aaPredicted RBP3.09□□□□□ -1.91
PPP4R1-209ENST00000578329 ACOT7LQ6ZUV0 252 aa3.09□□□□□ -1.91
PPP4R1-209ENST00000578329 GPR141Q7Z602 305 aa3.09□□□□□ -1.91
PPP4R1-209ENST00000578329 OR4B1Q8NGF8 309 aa3.09□□□□□ -1.91
PPP4R1-209ENST00000578329 RAB2BQ8WUD1 216 aa3.09□□□□□ -1.91
PPP4R1-209ENST00000578329 IGF2BP2-AS1Q96M15 143 aa3.09□□□□□ -1.91
PPP4R1-209ENST00000578329 NIPSNAP3BQ9BS92 247 aa3.09□□□□□ -1.91
PPP4R1-209ENST00000578329 SHANK2-AS3Q9BTD1 123 aa3.09□□□□□ -1.91
PPP4R1-209ENST00000578329 NDUFAF3Q9BU61 184 aa3.09□□□□□ -1.91
PPP4R1-209ENST00000578329 PDCD10Q9BUL8 212 aa3.09□□□□□ -1.91
PPP4R1-209ENST00000578329 SLC25A39Q9BZJ4 359 aaPredicted RBP3.09□□□□□ -1.91
PPP4R1-209ENST00000578329 ENY2Q9NPA8 101 aa3.09□□□□□ -1.91
PPP4R1-209ENST00000578329 DOK5Q9P104 306 aa3.09□□□□□ -1.91
PPP4R1-209ENST00000578329 RABL2BQ9UNT1 228 aa3.09□□□□□ -1.91
PPP4R1-209ENST00000578329 RCL1Q9Y2P8 373 aaKnown RBP3.09□□□□□ -1.91
PPP4R1-209ENST00000578329 LINC00588Q9Y4M8 146 aa3.09□□□□□ -1.91
PPP4R1-209ENST00000578329 RFNGQ9Y644 331 aa3.09□□□□□ -1.91
PPP4R1-209ENST00000578329 VPS13BQ7Z7G8 4022 aa3.09□□□□□ -1.92
PPP4R1-209ENST00000578329 A0A087X0K7 114 aa3.08□□□□□ -1.92
PPP4R1-209ENST00000578329 DUXBA0A1W2PPF3 345 aa3.08□□□□□ -1.92
PPP4R1-209ENST00000578329 C9orf170A2RU37 121 aa3.08□□□□□ -1.92
PPP4R1-209ENST00000578329 FABP12A6NFH5 140 aa3.08□□□□□ -1.92
PPP4R1-209ENST00000578329 SNRPGP15A8MWD9 76 aa3.08□□□□□ -1.92
PPP4R1-209ENST00000578329 H3BTX0 84 aa3.08□□□□□ -1.92
PPP4R1-209ENST00000578329 K7EPK0 472 aa3.08□□□□□ -1.92
PPP4R1-209ENST00000578329 WRBO00258 174 aa3.08□□□□□ -1.92
PPP4R1-209ENST00000578329 PLA2G10O15496 165 aa3.08□□□□□ -1.92
PPP4R1-209ENST00000578329 SYNGR2O43760 224 aa3.08□□□□□ -1.92
PPP4R1-209ENST00000578329 HOXB5P09067 269 aa3.08□□□□□ -1.92
PPP4R1-209ENST00000578329 P0DMU3 169 aa3.08□□□□□ -1.92
PPP4R1-209ENST00000578329 FAM231AP0DMU4 169 aa3.08□□□□□ -1.92
PPP4R1-209ENST00000578329 FAM231CP0DMU5 169 aa3.08□□□□□ -1.92
PPP4R1-209ENST00000578329 HTN3P15516 51 aa3.08□□□□□ -1.92
PPP4R1-209ENST00000578329 TSPOP30536 169 aa3.08□□□□□ -1.92
PPP4R1-209ENST00000578329 FUSP35637 526 aaKnown RBP eCLIP3.08□□□□□ -1.92
PPP4R1-209ENST00000578329 UBE2MP61081 183 aaKnown RBP3.08□□□□□ -1.92
PPP4R1-209ENST00000578329 SNRPD3P62318 126 aaKnown RBP3.08□□□□□ -1.92
PPP4R1-209ENST00000578329 IL15RAQ13261 267 aa3.08□□□□□ -1.92
PPP4R1-209ENST00000578329 RNF212Q495C1 297 aa3.08□□□□□ -1.92
PPP4R1-209ENST00000578329 TMEM128Q5BJH2 165 aa3.08□□□□□ -1.92
PPP4R1-209ENST00000578329 ETFRF1Q6IPR1 90 aa3.08□□□□□ -1.92
PPP4R1-209ENST00000578329 CYP2G1PQ6ZSU1 146 aa3.08□□□□□ -1.92
PPP4R1-209ENST00000578329 TMEM144Q7Z5S9 345 aa3.08□□□□□ -1.92
PPP4R1-209ENST00000578329 TMED4Q7Z7H5 227 aa3.08□□□□□ -1.92
PPP4R1-209ENST00000578329 OR1S1Q8NH92 325 aa3.08□□□□□ -1.92
PPP4R1-209ENST00000578329 MCFD2Q8NI22 146 aa3.08□□□□□ -1.92
PPP4R1-209ENST00000578329 RNASE11Q8TAA1 199 aaKnown RBP3.08□□□□□ -1.92
PPP4R1-209ENST00000578329 RNASE8Q8TDE3 154 aaKnown RBP3.08□□□□□ -1.92
PPP4R1-209ENST00000578329 C15orf40Q8WUR7 153 aa3.08□□□□□ -1.92
PPP4R1-209ENST00000578329 RNF141Q8WVD5 230 aa3.08□□□□□ -1.92
PPP4R1-209ENST00000578329 TMEM37Q8WXS4 190 aa3.08□□□□□ -1.92
PPP4R1-209ENST00000578329 SAT2Q96F10 170 aaPredicted RBP3.08□□□□□ -1.92
PPP4R1-209ENST00000578329 BCL7BQ9BQE9 202 aa3.08□□□□□ -1.92
PPP4R1-209ENST00000578329 C1QTNF4Q9BXJ3 329 aa3.08□□□□□ -1.92
PPP4R1-209ENST00000578329 MCUBQ9NWR8 336 aa3.08□□□□□ -1.92
PPP4R1-209ENST00000578329 RSL24D1Q9UHA3 163 aaKnown RBP3.08□□□□□ -1.92
PPP4R1-209ENST00000578329 SLC45A2Q9UMX9 530 aa3.08□□□□□ -1.92
PPP4R1-209ENST00000578329 TRAV5A0A0B4J249 113 aa3.07□□□□□ -1.92
PPP4R1-209ENST00000578329 NBDYA0A0U1RRE5 68 aa3.07□□□□□ -1.92
PPP4R1-209ENST00000578329 TMEM189A5PLL7 270 aa3.07□□□□□ -1.92
PPP4R1-209ENST00000578329 NDUFB6O95139 128 aa3.07□□□□□ -1.92
PPP4R1-209ENST00000578329 NDUFB4O95168 129 aa3.07□□□□□ -1.92
PPP4R1-209ENST00000578329 MBPP02686 304 aaPredicted RBP3.07□□□□□ -1.92
PPP4R1-209ENST00000578329 CT45A10P0DMU9 189 aa3.07□□□□□ -1.92
PPP4R1-209ENST00000578329 IGLC2P0DOY2 106 aa3.07□□□□□ -1.92
PPP4R1-209ENST00000578329 ORM2P19652 201 aa3.07□□□□□ -1.92
PPP4R1-209ENST00000578329 ANXA7P20073 488 aaKnown RBP3.07□□□□□ -1.92
PPP4R1-209ENST00000578329 ATP5IP56385 69 aaPredicted RBP3.07□□□□□ -1.92
PPP4R1-209ENST00000578329 SLC38A11Q08AI6 406 aa3.07□□□□□ -1.92
PPP4R1-209ENST00000578329 SPANXN5Q5MJ07 72 aa3.07□□□□□ -1.92
PPP4R1-209ENST00000578329 PRR9Q5T870 116 aa3.07□□□□□ -1.92
PPP4R1-209ENST00000578329 OR8I2Q8N0Y5 310 aa3.07□□□□□ -1.92
PPP4R1-209ENST00000578329 C11orf72Q8NBR9 251 aa3.07□□□□□ -1.92
PPP4R1-209ENST00000578329 OR8A1Q8NGG7 326 aa3.07□□□□□ -1.92
PPP4R1-209ENST00000578329 VSIG2Q96IQ7 327 aa3.07□□□□□ -1.92
PPP4R1-209ENST00000578329 SLC35E1Q96K37 410 aa3.07□□□□□ -1.92
PPP4R1-209ENST00000578329 SMIM8Q96KF7 97 aa3.07□□□□□ -1.92
PPP4R1-209ENST00000578329 FAM210BQ96KR6 192 aa3.07□□□□□ -1.92
PPP4R1-209ENST00000578329 FAM19A4Q96LR4 140 aa3.07□□□□□ -1.92
PPP4R1-209ENST00000578329 MGST2Q99735 147 aa3.07□□□□□ -1.92
PPP4R1-209ENST00000578329 SLC25A22Q9H936 323 aa3.07□□□□□ -1.92
PPP4R1-209ENST00000578329 ZNF331Q9NQX6 463 aaPredicted RBP3.07□□□□□ -1.92
PPP4R1-209ENST00000578329 SCP2D1Q9UJQ7 156 aa3.07□□□□□ -1.92
PPP4R1-209ENST00000578329 KCNIP3Q9Y2W7 256 aa3.07□□□□□ -1.92
PPP4R1-209ENST00000578329 TMED3Q9Y3Q3 217 aa3.07□□□□□ -1.92
PPP4R1-209ENST00000578329 MYCBP2O75592 4640 aa3.07□□□□□ -1.92
PPP4R1-209ENST00000578329 SRRM2Q9UQ35 2752 aaKnown RBP3.06□□□□□ -1.92
PPP4R1-209ENST00000578329 C7orf66A4D0T2 115 aa3.06□□□□□ -1.92
PPP4R1-209ENST00000578329 BOLA2-SMG1P6H3BVE0 249 aa3.06□□□□□ -1.92
PPP4R1-209ENST00000578329 CCSO14618 274 aa3.06□□□□□ -1.92
PPP4R1-209ENST00000578329 HBE1P02100 147 aa3.06□□□□□ -1.92
PPP4R1-209ENST00000578329 OR4E1P0C645 316 aa3.06□□□□□ -1.92
PPP4R1-209ENST00000578329 METTL15P1P0C7V9 234 aa3.06□□□□□ -1.92
PPP4R1-209ENST00000578329 DEFB130BP0DP73 79 aa3.06□□□□□ -1.92
PPP4R1-209ENST00000578329 DEFB130AP0DP74 79 aa3.06□□□□□ -1.92
PPP4R1-209ENST00000578329 VAMP1P23763 118 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms