RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 ZNF479Q96JC4 524 aa7.42□□□□□ -1.22
CDH8-203ENST00000577390 DPM3Q9P2X0 92 aa7.42□□□□□ -1.22
CDH8-203ENST00000577390 TEX45Q8NA69 505 aa7.42□□□□□ -1.22
CDH8-203ENST00000577390 SPANXCQ9NY87 97 aa7.42□□□□□ -1.22
CDH8-203ENST00000577390 TRAV8-3A0A0A6YYJ7 113 aa7.42□□□□□ -1.22
CDH8-203ENST00000577390 F8W1H4 67 aa7.42□□□□□ -1.22
CDH8-203ENST00000577390 IL18BPO95998 194 aa7.42□□□□□ -1.22
CDH8-203ENST00000577390 RPL23P62829 140 aaKnown RBP7.42□□□□□ -1.22
CDH8-203ENST00000577390 C5orf24Q7Z6I8 188 aa7.42□□□□□ -1.22
CDH8-203ENST00000577390 C9orf40Q8IXQ3 194 aa7.42□□□□□ -1.22
CDH8-203ENST00000577390 ZNF503Q96F45 646 aa7.42□□□□□ -1.22
CDH8-203ENST00000577390 WFDC5Q8TCV5 224 aa7.42□□□□□ -1.22
CDH8-203ENST00000577390 TSSC4Q9Y5U2 329 aaPredicted RBP7.42□□□□□ -1.22
CDH8-203ENST00000577390 LIPT2A6NK58 231 aa7.42□□□□□ -1.22
CDH8-203ENST00000577390 PIN1P1O15428 100 aa7.42□□□□□ -1.22
CDH8-203ENST00000577390 GATA2P23769 480 aaPredicted RBP7.42□□□□□ -1.22
CDH8-203ENST00000577390 OTORQ9NRC9 128 aa7.42□□□□□ -1.22
CDH8-203ENST00000577390 NHP2Q9NX24 153 aaKnown RBP7.42□□□□□ -1.22
CDH8-203ENST00000577390 IGKV1OR2-108A0A075B7D4 117 aa7.42□□□□□ -1.22
CDH8-203ENST00000577390 NBEAP1P0C6P0 100 aa7.42□□□□□ -1.22
CDH8-203ENST00000577390 VSIG8P0DPA2 414 aa7.42□□□□□ -1.22
CDH8-203ENST00000577390 ANKRD29Q8N6D5 301 aa7.42□□□□□ -1.22
CDH8-203ENST00000577390 NPIPB3Q92617 1050 aa7.42□□□□□ -1.22
CDH8-203ENST00000577390 ERG28Q9UKR5 140 aa7.42□□□□□ -1.22
CDH8-203ENST00000577390 F6UB75 175 aa7.42□□□□□ -1.22
CDH8-203ENST00000577390 NBL1P41271 181 aa7.42□□□□□ -1.22
CDH8-203ENST00000577390 HGFACQ04756 655 aa7.42□□□□□ -1.22
CDH8-203ENST00000577390 C1orf100Q5SVJ3 147 aa7.42□□□□□ -1.22
CDH8-203ENST00000577390 CLPSL2Q6UWE3 100 aa7.42□□□□□ -1.22
CDH8-203ENST00000577390 PRR4Q16378 134 aa7.42□□□□□ -1.22
CDH8-203ENST00000577390 PRTN3P24158 256 aa7.41□□□□□ -1.22
CDH8-203ENST00000577390 SSBP2P81877 361 aaPredicted RBP7.41□□□□□ -1.22
CDH8-203ENST00000577390 VWC2Q2TAL6 325 aa7.41□□□□□ -1.22
CDH8-203ENST00000577390 GAGE12JA6NER3 117 aa7.41□□□□□ -1.22
CDH8-203ENST00000577390 TIMM23O14925 209 aa7.41□□□□□ -1.22
CDH8-203ENST00000577390 GAGE7O76087 117 aa7.41□□□□□ -1.22
CDH8-203ENST00000577390 GAGE12FP0CL80 117 aa7.41□□□□□ -1.22
CDH8-203ENST00000577390 GAGE12GP0CL81 117 aa7.41□□□□□ -1.22
CDH8-203ENST00000577390 GAGE12IP0CL82 117 aa7.41□□□□□ -1.22
CDH8-203ENST00000577390 GAGE4Q13068 117 aa7.41□□□□□ -1.22
CDH8-203ENST00000577390 TMEM219Q86XT9 240 aa7.41□□□□□ -1.22
CDH8-203ENST00000577390 FAM90A20PA6NIJ5 464 aa7.41□□□□□ -1.22
CDH8-203ENST00000577390 OR2H2O95918 312 aa7.41□□□□□ -1.22
CDH8-203ENST00000577390 IL36BQ9NZH7 164 aa7.41□□□□□ -1.22
CDH8-203ENST00000577390 NDUFB1O75438 58 aa7.41□□□□□ -1.22
CDH8-203ENST00000577390 C8orf88P0DMB2 117 aa7.41□□□□□ -1.22
CDH8-203ENST00000577390 PFN2P35080 140 aa7.41□□□□□ -1.22
CDH8-203ENST00000577390 LINC00527Q9UJ94 153 aa7.41□□□□□ -1.22
CDH8-203ENST00000577390 WNT2P09544 360 aa7.41□□□□□ -1.22
CDH8-203ENST00000577390 SIGLEC15Q6ZMC9 328 aa7.41□□□□□ -1.22
CDH8-203ENST00000577390 THSD7AQ9UPZ6 1657 aa7.41□□□□□ -1.22
CDH8-203ENST00000577390 FAM231BA6NCW3 169 aa7.41□□□□□ -1.22
CDH8-203ENST00000577390 TECTAO75443 2155 aa7.41□□□□□ -1.22
CDH8-203ENST00000577390 A0A096LPF7 62 aa7.41□□□□□ -1.22
CDH8-203ENST00000577390 C1QTNF9P0C862 333 aa7.41□□□□□ -1.22
CDH8-203ENST00000577390 DLL3Q9NYJ7 618 aa7.4□□□□□ -1.22
CDH8-203ENST00000577390 UBE2AP49459 152 aa7.4□□□□□ -1.22
CDH8-203ENST00000577390 LTBP3Q9NS15 1303 aa7.4□□□□□ -1.22
CDH8-203ENST00000577390 SOCS1O15524 211 aa7.4□□□□□ -1.22
CDH8-203ENST00000577390 OR9G9P0C7N8 305 aa7.4□□□□□ -1.22
CDH8-203ENST00000577390 BVES-AS1Q5T3Y7 98 aa7.4□□□□□ -1.22
CDH8-203ENST00000577390 COL16A1Q07092 1604 aaPredicted RBP7.4□□□□□ -1.22
CDH8-203ENST00000577390 CELA2BP08218 269 aaPredicted RBP7.4□□□□□ -1.22
CDH8-203ENST00000577390 IMMP1LQ96LU5 166 aa7.4□□□□□ -1.22
CDH8-203ENST00000577390 EPDR1Q9UM22 224 aa7.4□□□□□ -1.22
CDH8-203ENST00000577390 FAM90A7PA6NKC0 464 aa7.4□□□□□ -1.22
CDH8-203ENST00000577390 FAM90A22PA8MWA6 464 aa7.4□□□□□ -1.22
CDH8-203ENST00000577390 FAM90A12PA8MX19 464 aa7.4□□□□□ -1.22
CDH8-203ENST00000577390 FAM90A23PA8MXZ1 464 aa7.4□□□□□ -1.22
CDH8-203ENST00000577390 SOCS3O14543 225 aa7.4□□□□□ -1.22
CDH8-203ENST00000577390 CXCL16Q9H2A7 254 aa7.4□□□□□ -1.22
CDH8-203ENST00000577390 C2CD3Q4AC94 2353 aa7.4□□□□□ -1.23
CDH8-203ENST00000577390 MLNRO43193 412 aa7.4□□□□□ -1.23
CDH8-203ENST00000577390 DRAM1Q8N682 238 aa7.4□□□□□ -1.23
CDH8-203ENST00000577390 PRDM6Q9NQX0 595 aa7.4□□□□□ -1.23
CDH8-203ENST00000577390 RTBDNQ9BSG5 229 aaPredicted RBP7.4□□□□□ -1.23
CDH8-203ENST00000577390 IGHV4-4A0A075B6R2 117 aa7.4□□□□□ -1.23
CDH8-203ENST00000577390 PPIFP30405 207 aaKnown RBP7.4□□□□□ -1.23
CDH8-203ENST00000577390 CA7P43166 264 aa7.4□□□□□ -1.23
CDH8-203ENST00000577390 PRIMA1Q86XR5 153 aa7.4□□□□□ -1.23
CDH8-203ENST00000577390 FANCD2OSQ96PS1 177 aa7.4□□□□□ -1.23
CDH8-203ENST00000577390 C19orf24Q9BVV8 132 aa7.4□□□□□ -1.23
CDH8-203ENST00000577390 CSPG4Q6UVK1 2322 aa7.4□□□□□ -1.23
CDH8-203ENST00000577390 A8MWV9 139 aa7.39□□□□□ -1.23
CDH8-203ENST00000577390 IGLV3-16A0A075B6K0 115 aa7.39□□□□□ -1.23
CDH8-203ENST00000577390 TIRAPP58753 221 aa7.39□□□□□ -1.23
CDH8-203ENST00000577390 TRAV5A0A0B4J249 113 aa7.39□□□□□ -1.23
CDH8-203ENST00000577390 A0A1B0GUT8 65 aa7.39□□□□□ -1.23
CDH8-203ENST00000577390 VCYO14598 125 aa7.39□□□□□ -1.23
CDH8-203ENST00000577390 Q6ZNB5 142 aa7.39□□□□□ -1.23
CDH8-203ENST00000577390 C10orf35Q96D05 121 aa7.39□□□□□ -1.23
CDH8-203ENST00000577390 SCRT2Q9NQ03 307 aa7.39□□□□□ -1.23
CDH8-203ENST00000577390 IGKV4-1P06312 121 aa7.39□□□□□ -1.23
CDH8-203ENST00000577390 EGR4Q05215 589 aa7.39□□□□□ -1.23
CDH8-203ENST00000577390 Q0VG73 95 aa7.39□□□□□ -1.23
CDH8-203ENST00000577390 RIF1Q5UIP0 2472 aaKnown RBP7.39□□□□□ -1.23
CDH8-203ENST00000577390 ZNF876PQ49A33 203 aa7.39□□□□□ -1.23
CDH8-203ENST00000577390 ZNF474Q6S9Z5 364 aaPredicted RBP7.39□□□□□ -1.23
CDH8-203ENST00000577390 RASL10AQ92737 203 aa7.39□□□□□ -1.23
CDH8-203ENST00000577390 WFDC1Q9HC57 220 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms