RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 GATAD1Q8WUU5 269 aa9.99□□□□□ -0.81
CIITA-210ENST00000575513 MGST2Q99735 147 aa9.99□□□□□ -0.81
CIITA-210ENST00000575513 SHANK2-AS3Q9BTD1 123 aa9.99□□□□□ -0.81
CIITA-210ENST00000575513 SLC25A39Q9BZJ4 359 aaPredicted RBP9.99□□□□□ -0.81
CIITA-210ENST00000575513 RETNQ9HD89 108 aa9.99□□□□□ -0.81
CIITA-210ENST00000575513 HIGD1AQ9Y241 93 aa9.99□□□□□ -0.81
CIITA-210ENST00000575513 UBE2L5PA0A1B0GUS4 154 aa9.98□□□□□ -0.81
CIITA-210ENST00000575513 ISLRO14498 428 aa9.98□□□□□ -0.81
CIITA-210ENST00000575513 CAMLGP49069 296 aa9.98□□□□□ -0.81
CIITA-210ENST00000575513 PSMB3P49720 205 aa9.98□□□□□ -0.81
CIITA-210ENST00000575513 PSMG4Q5JS54 123 aa9.98□□□□□ -0.81
CIITA-210ENST00000575513 MORN3Q6PF18 240 aaPredicted RBP9.98□□□□□ -0.81
CIITA-210ENST00000575513 TRPT1Q86TN4 253 aaKnown RBP9.98□□□□□ -0.81
CIITA-210ENST00000575513 OR2T35Q8NGX2 323 aa9.98□□□□□ -0.81
CIITA-210ENST00000575513 IL17DQ8TAD2 202 aa9.98□□□□□ -0.81
CIITA-210ENST00000575513 AQP10Q96PS8 301 aa9.98□□□□□ -0.81
CIITA-210ENST00000575513 ELOA3CA0A087WX78 387 aaPredicted RBP9.97□□□□□ -0.81
CIITA-210ENST00000575513 H3BRN7 92 aa9.97□□□□□ -0.81
CIITA-210ENST00000575513 SOCS3O14543 225 aa9.97□□□□□ -0.81
CIITA-210ENST00000575513 SPP1P10451 314 aa9.97□□□□□ -0.81
CIITA-210ENST00000575513 RPL7P18124 248 aaKnown RBP9.97□□□□□ -0.81
CIITA-210ENST00000575513 RPL29P47914 159 aaKnown RBP9.97□□□□□ -0.81
CIITA-210ENST00000575513 PRR20EP86478 221 aa9.97□□□□□ -0.81
CIITA-210ENST00000575513 PRR20CP86479 221 aa9.97□□□□□ -0.81
CIITA-210ENST00000575513 PRR20DP86480 221 aa9.97□□□□□ -0.81
CIITA-210ENST00000575513 PRR20BP86481 221 aa9.97□□□□□ -0.81
CIITA-210ENST00000575513 PRR20AP86496 221 aa9.97□□□□□ -0.81
CIITA-210ENST00000575513 CLINT1Q14677 625 aa9.97□□□□□ -0.81
CIITA-210ENST00000575513 OPCMLQ14982 345 aa9.97□□□□□ -0.81
CIITA-210ENST00000575513 ATP5SQ99766 215 aa9.97□□□□□ -0.81
CIITA-210ENST00000575513 ARL6Q9H0F7 186 aa9.97□□□□□ -0.81
CIITA-210ENST00000575513 SLC25A32Q9H2D1 315 aa9.97□□□□□ -0.81
CIITA-210ENST00000575513 G3V3Q6 166 aa9.96□□□□□ -0.82
CIITA-210ENST00000575513 OR5G3P0C626 314 aa9.96□□□□□ -0.82
CIITA-210ENST00000575513 ATF4P18848 351 aaPredicted RBP9.96□□□□□ -0.82
CIITA-210ENST00000575513 FGF7P21781 194 aa9.96□□□□□ -0.82
CIITA-210ENST00000575513 DEFB135Q30KP9 77 aa9.96□□□□□ -0.82
CIITA-210ENST00000575513 SPATA31B1PQ5VZV4 182 aa9.96□□□□□ -0.82
CIITA-210ENST00000575513 PATE2Q6UY27 113 aa9.96□□□□□ -0.82
CIITA-210ENST00000575513 Q6ZRG5 221 aa9.96□□□□□ -0.82
CIITA-210ENST00000575513 CLUHP3Q96NS8 147 aa9.96□□□□□ -0.82
CIITA-210ENST00000575513 RSG1Q9BU20 258 aa9.96□□□□□ -0.82
CIITA-210ENST00000575513 PARD6GQ9BYG4 376 aaPredicted RBP9.96□□□□□ -0.82
CIITA-210ENST00000575513 ARV1Q9H2C2 271 aa9.96□□□□□ -0.82
CIITA-210ENST00000575513 SLC25A22Q9H936 323 aa9.96□□□□□ -0.82
CIITA-210ENST00000575513 KNCNA6PVL3 124 aa9.95□□□□□ -0.82
CIITA-210ENST00000575513 NUTF2P61970 127 aaKnown RBP9.95□□□□□ -0.82
CIITA-210ENST00000575513 ACTL10Q5JWF8 245 aa9.95□□□□□ -0.82
CIITA-210ENST00000575513 MIC13Q5XKP0 118 aa9.95□□□□□ -0.82
CIITA-210ENST00000575513 SCRT1Q9BWW7 348 aa9.95□□□□□ -0.82
CIITA-210ENST00000575513 NPCDR1Q9BY65 106 aa9.95□□□□□ -0.82
CIITA-210ENST00000575513 WDR61Q9GZS3 305 aaKnown RBP9.95□□□□□ -0.82
CIITA-210ENST00000575513 DNAJC4Q9NNZ3 241 aa9.95□□□□□ -0.82
CIITA-210ENST00000575513 DOK5Q9P104 306 aa9.95□□□□□ -0.82
CIITA-210ENST00000575513 FXYD6-FXYD2A0A087WZ82 144 aa9.94□□□□□ -0.82
CIITA-210ENST00000575513 H3BMM0 161 aa9.94□□□□□ -0.82
CIITA-210ENST00000575513 CA1P00915 261 aaPredicted RBP9.94□□□□□ -0.82
CIITA-210ENST00000575513 IFNA5P01569 189 aa9.94□□□□□ -0.82
CIITA-210ENST00000575513 HLA-DRB4P13762 266 aa9.94□□□□□ -0.82
CIITA-210ENST00000575513 B2MP61769 119 aa9.94□□□□□ -0.82
CIITA-210ENST00000575513 CASC10Q5T4H9 136 aa9.94□□□□□ -0.82
CIITA-210ENST00000575513 FOXI2Q6ZQN5 318 aa9.94□□□□□ -0.82
CIITA-210ENST00000575513 LINC00305Q7Z4B0 112 aa9.94□□□□□ -0.82
CIITA-210ENST00000575513 INO80EQ8NBZ0 244 aaPredicted RBP9.94□□□□□ -0.82
CIITA-210ENST00000575513 C17orf77Q96MU5 243 aa9.94□□□□□ -0.82
CIITA-210ENST00000575513 SAV1Q9H4B6 383 aaPredicted RBP9.94□□□□□ -0.82
CIITA-210ENST00000575513 WFDC1Q9HC57 220 aa9.94□□□□□ -0.82
CIITA-210ENST00000575513 KCNIP2Q9NS61 270 aa9.94□□□□□ -0.82
CIITA-210ENST00000575513 SLC39A9Q9NUM3 307 aa9.94□□□□□ -0.82
CIITA-210ENST00000575513 TNFSF18Q9UNG2 199 aa9.94□□□□□ -0.82
CIITA-210ENST00000575513 PXMP4Q9Y6I8 212 aa9.94□□□□□ -0.82
CIITA-210ENST00000575513 HLA-DRB4X5D2U9 266 aa9.94□□□□□ -0.82
CIITA-210ENST00000575513 A0A087X0K7 114 aa9.93□□□□□ -0.82
CIITA-210ENST00000575513 RNF222A6NCQ9 220 aa9.93□□□□□ -0.82
CIITA-210ENST00000575513 COX7A2P2O60397 106 aa9.93□□□□□ -0.82
CIITA-210ENST00000575513 GIG44P09565 113 aaPredicted RBP9.93□□□□□ -0.82
CIITA-210ENST00000575513 C10orf113Q5VZT2 155 aa9.93□□□□□ -0.82
CIITA-210ENST00000575513 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.93□□□□□ -0.82
CIITA-210ENST00000575513 OR1L4Q8NGR5 311 aa9.93□□□□□ -0.82
CIITA-210ENST00000575513 TMEM37Q8WXS4 190 aa9.93□□□□□ -0.82
CIITA-210ENST00000575513 C16orf92Q96LL3 132 aa9.93□□□□□ -0.82
CIITA-210ENST00000575513 LINC00052Q96N35 136 aa9.93□□□□□ -0.82
CIITA-210ENST00000575513 UHRF2Q96PU4 802 aa9.93□□□□□ -0.82
CIITA-210ENST00000575513 PFDN5Q99471 154 aa9.93□□□□□ -0.82
CIITA-210ENST00000575513 RARRES2Q99969 163 aa9.93□□□□□ -0.82
CIITA-210ENST00000575513 C1QTNF4Q9BXJ3 329 aa9.93□□□□□ -0.82
CIITA-210ENST00000575513 SMIM3Q9BZL3 60 aa9.93□□□□□ -0.82
CIITA-210ENST00000575513 RPRMQ9NS64 109 aa9.93□□□□□ -0.82
CIITA-210ENST00000575513 C17orf112F2Z3M2 114 aa9.92□□□□□ -0.82
CIITA-210ENST00000575513 MRPS12O15235 138 aaKnown RBP9.92□□□□□ -0.82
CIITA-210ENST00000575513 BPIFA4PQ86YQ2 179 aa9.92□□□□□ -0.82
CIITA-210ENST00000575513 ZNF709Q8N972 641 aa9.92□□□□□ -0.82
CIITA-210ENST00000575513 SCGB1C1Q8TD33 95 aa9.92□□□□□ -0.82
CIITA-210ENST00000575513 CXCL2P19875 107 aa9.91□□□□□ -0.82
CIITA-210ENST00000575513 ZNF266Q14584 549 aa9.91□□□□□ -0.82
CIITA-210ENST00000575513 EBLN2Q6P2I7 272 aa9.91□□□□□ -0.82
CIITA-210ENST00000575513 CSNK1G2-AS1Q8NCQ2 148 aa9.91□□□□□ -0.82
CIITA-210ENST00000575513 OR11H2Q8NH07 326 aa9.91□□□□□ -0.82
CIITA-210ENST00000575513 TRAV8-2A0A0B4J237 113 aa9.9□□□□□ -0.82
CIITA-210ENST00000575513 A0A0J9YWU9 116 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms