RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 PAFAH1B2P68402 229 aa6.29□□□□□ -1.4
SMG6-216ENST00000575176 ACTL10Q5JWF8 245 aa6.29□□□□□ -1.4
SMG6-216ENST00000575176 ZFAND6Q6FIF0 208 aa6.29□□□□□ -1.4
SMG6-216ENST00000575176 IL17DQ8TAD2 202 aa6.29□□□□□ -1.4
SMG6-216ENST00000575176 CLUHP3Q96NS8 147 aa6.29□□□□□ -1.4
SMG6-216ENST00000575176 SAV1Q9H4B6 383 aaPredicted RBP6.29□□□□□ -1.4
SMG6-216ENST00000575176 ALG5Q9Y673 324 aa6.29□□□□□ -1.4
SMG6-216ENST00000575176 UBE2L5PA0A1B0GUS4 154 aa6.28□□□□□ -1.4
SMG6-216ENST00000575176 SMCO3A2RU48 225 aa6.28□□□□□ -1.4
SMG6-216ENST00000575176 SLC17A3O00476 420 aa6.28□□□□□ -1.4
SMG6-216ENST00000575176 ISLRO14498 428 aa6.28□□□□□ -1.4
SMG6-216ENST00000575176 FABP1P07148 127 aa6.28□□□□□ -1.4
SMG6-216ENST00000575176 IGLC2P0DOY2 106 aa6.28□□□□□ -1.4
SMG6-216ENST00000575176 SPP1P10451 314 aa6.28□□□□□ -1.4
SMG6-216ENST00000575176 ORM2P19652 201 aa6.28□□□□□ -1.4
SMG6-216ENST00000575176 HLA-DMBP28068 263 aa6.28□□□□□ -1.4
SMG6-216ENST00000575176 CAV2P51636 162 aa6.28□□□□□ -1.4
SMG6-216ENST00000575176 AP2S1P53680 142 aaPredicted RBP6.28□□□□□ -1.4
SMG6-216ENST00000575176 CMC4P56277 68 aaPredicted RBP6.28□□□□□ -1.4
SMG6-216ENST00000575176 RPL11P62913 178 aaKnown RBP6.28□□□□□ -1.4
SMG6-216ENST00000575176 NHLH2Q02577 135 aa6.28□□□□□ -1.4
SMG6-216ENST00000575176 ZNF546Q86UE3 836 aa6.28□□□□□ -1.4
SMG6-216ENST00000575176 TMEM217Q8N7C4 229 aa6.28□□□□□ -1.4
SMG6-216ENST00000575176 OR11H7Q8NGC8 314 aa6.28□□□□□ -1.4
SMG6-216ENST00000575176 OR1B1Q8NGR6 318 aa6.28□□□□□ -1.4
SMG6-216ENST00000575176 GATAD1Q8WUU5 269 aa6.28□□□□□ -1.4
SMG6-216ENST00000575176 PPP1R1CQ8WVI7 109 aa6.28□□□□□ -1.4
SMG6-216ENST00000575176 NARS2Q96I59 477 aaKnown RBP6.28□□□□□ -1.4
SMG6-216ENST00000575176 ARV1Q9H2C2 271 aa6.28□□□□□ -1.4
SMG6-216ENST00000575176 GPN1Q9HCN4 374 aaPredicted RBP6.28□□□□□ -1.4
SMG6-216ENST00000575176 FBXL17Q9UF56 701 aa6.28□□□□□ -1.4
SMG6-216ENST00000575176 DNAH17Q9UFH2 4485 aa6.28□□□□□ -1.4
SMG6-216ENST00000575176 A0A0J9YX75 114 aa6.27□□□□□ -1.41
SMG6-216ENST00000575176 HYPMO75409 117 aa6.27□□□□□ -1.41
SMG6-216ENST00000575176 MPC2O95563 127 aa6.27□□□□□ -1.41
SMG6-216ENST00000575176 RBMY1A1P0DJD3 496 aaKnown RBP6.27□□□□□ -1.41
SMG6-216ENST00000575176 RBMY1CP0DJD4 496 aa6.27□□□□□ -1.41
SMG6-216ENST00000575176 DEFA1P59665 94 aa6.27□□□□□ -1.41
SMG6-216ENST00000575176 DEFA3P59666 94 aa6.27□□□□□ -1.41
SMG6-216ENST00000575176 RBMY1FQ15415 496 aaKnown RBP6.27□□□□□ -1.41
SMG6-216ENST00000575176 GCSAMLQ5JQS6 135 aa6.27□□□□□ -1.41
SMG6-216ENST00000575176 MIC13Q5XKP0 118 aa6.27□□□□□ -1.41
SMG6-216ENST00000575176 IGFL4Q6B9Z1 124 aa6.27□□□□□ -1.41
SMG6-216ENST00000575176 ZNF705AQ6ZN79 300 aaPredicted RBP6.27□□□□□ -1.41
SMG6-216ENST00000575176 FOXI2Q6ZQN5 318 aa6.27□□□□□ -1.41
SMG6-216ENST00000575176 OR8I2Q8N0Y5 310 aa6.27□□□□□ -1.41
SMG6-216ENST00000575176 RNF182Q8N6D2 247 aa6.27□□□□□ -1.41
SMG6-216ENST00000575176 TMEM147Q9BVK8 224 aa6.27□□□□□ -1.41
SMG6-216ENST00000575176 NPCDR1Q9BY65 106 aa6.27□□□□□ -1.41
SMG6-216ENST00000575176 ARL6Q9H0F7 186 aa6.27□□□□□ -1.41
SMG6-216ENST00000575176 SLC25A22Q9H936 323 aa6.27□□□□□ -1.41
SMG6-216ENST00000575176 UQCC1Q9NVA1 299 aa6.27□□□□□ -1.41
SMG6-216ENST00000575176 MGAT4CQ9UBM8 478 aa6.27□□□□□ -1.41
SMG6-216ENST00000575176 HIGD1AQ9Y241 93 aa6.27□□□□□ -1.41
SMG6-216ENST00000575176 ELOA3CA0A087WX78 387 aaPredicted RBP6.26□□□□□ -1.41
SMG6-216ENST00000575176 LCE6AA0A183 80 aa6.26□□□□□ -1.41
SMG6-216ENST00000575176 ZNF705FA8MVS1 300 aaPredicted RBP6.26□□□□□ -1.41
SMG6-216ENST00000575176 H3BQ15 152 aa6.26□□□□□ -1.41
SMG6-216ENST00000575176 L7N2F9 121 aa6.26□□□□□ -1.41
SMG6-216ENST00000575176 CRXO43186 299 aaPredicted RBP6.26□□□□□ -1.41
SMG6-216ENST00000575176 ZNF705DP0CH99 300 aaPredicted RBP6.26□□□□□ -1.41
SMG6-216ENST00000575176 ZNF705BP0CI00 300 aaPredicted RBP6.26□□□□□ -1.41
SMG6-216ENST00000575176 RPL29P47914 159 aaKnown RBP6.26□□□□□ -1.41
SMG6-216ENST00000575176 CAMLGP49069 296 aa6.26□□□□□ -1.41
SMG6-216ENST00000575176 VAMP2P63027 116 aa6.26□□□□□ -1.41
SMG6-216ENST00000575176 LRRC37A5PQ49AS3 106 aa6.26□□□□□ -1.41
SMG6-216ENST00000575176 PXDC1Q5TGL8 231 aa6.26□□□□□ -1.41
SMG6-216ENST00000575176 MORN3Q6PF18 240 aaPredicted RBP6.26□□□□□ -1.41
SMG6-216ENST00000575176 STHQ8IWL8 128 aa6.26□□□□□ -1.41
SMG6-216ENST00000575176 OR5C1Q8NGR4 320 aa6.26□□□□□ -1.41
SMG6-216ENST00000575176 SAT2Q96F10 170 aaPredicted RBP6.26□□□□□ -1.41
SMG6-216ENST00000575176 FAM167A-AS1Q96KT0 104 aa6.26□□□□□ -1.41
SMG6-216ENST00000575176 RSG1Q9BU20 258 aa6.26□□□□□ -1.41
SMG6-216ENST00000575176 SLC35B3Q9H1N7 401 aa6.26□□□□□ -1.41
SMG6-216ENST00000575176 CLEC5AQ9NY25 188 aa6.26□□□□□ -1.41
SMG6-216ENST00000575176 MBD2Q9UBB5 411 aa6.26□□□□□ -1.41
SMG6-216ENST00000575176 BIRC6Q9NR09 4857 aa6.26□□□□□ -1.41
SMG6-216ENST00000575176 TRAV5A0A0B4J249 113 aa6.25□□□□□ -1.41
SMG6-216ENST00000575176 IGHV4-28A0A0C4DH34 117 aa6.25□□□□□ -1.41
SMG6-216ENST00000575176 E5RGE8 158 aa6.25□□□□□ -1.41
SMG6-216ENST00000575176 PRB4P10163 310 aaPredicted RBP6.25□□□□□ -1.41
SMG6-216ENST00000575176 S100A11P31949 105 aa6.25□□□□□ -1.41
SMG6-216ENST00000575176 GALR1P47211 349 aa6.25□□□□□ -1.41
SMG6-216ENST00000575176 MEOX2P50222 304 aa6.25□□□□□ -1.41
SMG6-216ENST00000575176 BCAP31P51572 246 aa6.25□□□□□ -1.41
SMG6-216ENST00000575176 SNRPD3P62318 126 aaKnown RBP6.25□□□□□ -1.41
SMG6-216ENST00000575176 BAXQ07812 192 aa6.25□□□□□ -1.41
SMG6-216ENST00000575176 OXA1LQ15070 435 aa6.25□□□□□ -1.41
SMG6-216ENST00000575176 FCN2Q15485 313 aa6.25□□□□□ -1.41
SMG6-216ENST00000575176 Q5BKY6 102 aa6.25□□□□□ -1.41
SMG6-216ENST00000575176 SPATA31B1PQ5VZV4 182 aa6.25□□□□□ -1.41
SMG6-216ENST00000575176 LINC00305Q7Z4B0 112 aa6.25□□□□□ -1.41
SMG6-216ENST00000575176 OR11H2Q8NH07 326 aa6.25□□□□□ -1.41
SMG6-216ENST00000575176 THAP6Q8TBB0 222 aa6.25□□□□□ -1.41
SMG6-216ENST00000575176 GPR82Q96P67 336 aa6.25□□□□□ -1.41
SMG6-216ENST00000575176 WFDC1Q9HC57 220 aa6.25□□□□□ -1.41
SMG6-216ENST00000575176 ZNF331Q9NQX6 463 aaPredicted RBP6.25□□□□□ -1.41
SMG6-216ENST00000575176 SLC39A9Q9NUM3 307 aa6.25□□□□□ -1.41
SMG6-216ENST00000575176 CELA1Q9UNI1 258 aa6.25□□□□□ -1.41
SMG6-216ENST00000575176 HSPB11Q9Y547 144 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms