RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 SNHG12Q9BXW3 62 aa11.05□□□□□ -0.64
TVP23A-207ENST00000573360 ZNF257Q9Y2Q1 563 aa11.05□□□□□ -0.64
TVP23A-207ENST00000573360 IGKV1OR2-108A0A075B7D4 117 aa11.04□□□□□ -0.64
TVP23A-207ENST00000573360 LINC00869P0C866 280 aa11.04□□□□□ -0.64
TVP23A-207ENST00000573360 IBA57Q5T440 356 aaKnown RBP11.04□□□□□ -0.64
TVP23A-207ENST00000573360 CFHR4Q92496 578 aa11.04□□□□□ -0.64
TVP23A-207ENST00000573360 ZNF586Q9NXT0 402 aa11.04□□□□□ -0.64
TVP23A-207ENST00000573360 IGHV3OR16-13A0A075B7E8 117 aa11.04□□□□□ -0.64
TVP23A-207ENST00000573360 IGHV3-74A0A0B4J1X5 117 aa11.04□□□□□ -0.64
TVP23A-207ENST00000573360 ODF3BA8MYP8 253 aa11.04□□□□□ -0.64
TVP23A-207ENST00000573360 PYYP10082 97 aa11.04□□□□□ -0.64
TVP23A-207ENST00000573360 SRIP30626 198 aa11.04□□□□□ -0.64
TVP23A-207ENST00000573360 RANP62826 216 aaKnown RBP11.04□□□□□ -0.64
TVP23A-207ENST00000573360 FAM19A2Q8N3H0 131 aa11.04□□□□□ -0.64
TVP23A-207ENST00000573360 ARPC1AQ92747 370 aa11.04□□□□□ -0.64
TVP23A-207ENST00000573360 LSM4Q9Y4Z0 139 aaKnown RBP11.04□□□□□ -0.64
TVP23A-207ENST00000573360 IGLC7A0M8Q6 106 aa11.04□□□□□ -0.64
TVP23A-207ENST00000573360 C8orf31Q8N9H6 132 aa11.04□□□□□ -0.64
TVP23A-207ENST00000573360 FN1P02751 2386 aaKnown RBP11.04□□□□□ -0.64
TVP23A-207ENST00000573360 FAM90A9PA6NNJ1 464 aa11.03□□□□□ -0.64
TVP23A-207ENST00000573360 LYZP61626 148 aa11.03□□□□□ -0.64
TVP23A-207ENST00000573360 Q56UQ5 140 aa11.03□□□□□ -0.64
TVP23A-207ENST00000573360 Q6ZWC4 215 aa11.03□□□□□ -0.64
TVP23A-207ENST00000573360 ATOH7Q8N100 152 aa11.03□□□□□ -0.64
TVP23A-207ENST00000573360 RBM14Q96PK6 669 aaKnown RBP11.03□□□□□ -0.64
TVP23A-207ENST00000573360 C2orf88Q9BSF0 95 aa11.03□□□□□ -0.64
TVP23A-207ENST00000573360 MFAP2P55001 183 aa11.03□□□□□ -0.64
TVP23A-207ENST00000573360 CD69Q07108 199 aa11.03□□□□□ -0.64
TVP23A-207ENST00000573360 FAM71F2Q6NXP2 309 aa11.03□□□□□ -0.64
TVP23A-207ENST00000573360 C1orf159Q96HA4 380 aa11.03□□□□□ -0.64
TVP23A-207ENST00000573360 TMEM249Q2WGJ8 235 aa11.03□□□□□ -0.64
TVP23A-207ENST00000573360 TMEM68Q96MH6 324 aa11.03□□□□□ -0.64
TVP23A-207ENST00000573360 FSTL3O95633 263 aa11.02□□□□□ -0.64
TVP23A-207ENST00000573360 C8orf88P0DMB2 117 aa11.02□□□□□ -0.64
TVP23A-207ENST00000573360 TMEM95Q3KNT9 176 aa11.02□□□□□ -0.64
TVP23A-207ENST00000573360 HIST2H2BDQ6DRA6 164 aa11.02□□□□□ -0.64
TVP23A-207ENST00000573360 ZNF329Q86UD4 541 aa11.02□□□□□ -0.64
TVP23A-207ENST00000573360 DIRC3C9JPN6 131 aa11.02□□□□□ -0.65
TVP23A-207ENST00000573360 PRSS46E5RG02 174 aa11.02□□□□□ -0.65
TVP23A-207ENST00000573360 BLCAPP62952 87 aa11.02□□□□□ -0.65
TVP23A-207ENST00000573360 PAFAH1B2P68402 229 aa11.02□□□□□ -0.65
TVP23A-207ENST00000573360 TMEM183BQ1AE95 376 aa11.02□□□□□ -0.65
TVP23A-207ENST00000573360 IGHV3-49A0A0A0MS15 119 aa11.02□□□□□ -0.65
TVP23A-207ENST00000573360 C1orf194Q5T5A4 169 aa11.02□□□□□ -0.65
TVP23A-207ENST00000573360 MINOS1Q5TGZ0 78 aa11.02□□□□□ -0.65
TVP23A-207ENST00000573360 LINC01356Q8N9X3 169 aa11.02□□□□□ -0.65
TVP23A-207ENST00000573360 TXN2Q99757 166 aa11.02□□□□□ -0.65
TVP23A-207ENST00000573360 C1RLQ9NZP8 487 aa11.02□□□□□ -0.65
TVP23A-207ENST00000573360 MINOS1-NBL1R4GNA1 71 aa11.02□□□□□ -0.65
TVP23A-207ENST00000573360 PAX8Q06710 450 aa11.01□□□□□ -0.65
TVP23A-207ENST00000573360 BEX4Q9NWD9 120 aaPredicted RBP11.01□□□□□ -0.65
TVP23A-207ENST00000573360 TBL2Q9Y4P3 447 aaKnown RBP11.01□□□□□ -0.65
TVP23A-207ENST00000573360 GGTLC3B5MD39 225 aa11.01□□□□□ -0.65
TVP23A-207ENST00000573360 ATP6V0E1O15342 81 aa11.01□□□□□ -0.65
TVP23A-207ENST00000573360 SLC25A16P16260 332 aa11.01□□□□□ -0.65
TVP23A-207ENST00000573360 MORN5Q5VZ52 161 aa11.01□□□□□ -0.65
TVP23A-207ENST00000573360 YPEL3P61236 119 aaPredicted RBP11□□□□□ -0.65
TVP23A-207ENST00000573360 NUTF2P61970 127 aaKnown RBP11□□□□□ -0.65
TVP23A-207ENST00000573360 UBE2G1P62253 170 aa11□□□□□ -0.65
TVP23A-207ENST00000573360 PRR20EP86478 221 aa11□□□□□ -0.65
TVP23A-207ENST00000573360 PRR20CP86479 221 aa11□□□□□ -0.65
TVP23A-207ENST00000573360 PRR20DP86480 221 aa11□□□□□ -0.65
TVP23A-207ENST00000573360 PRR20BP86481 221 aa11□□□□□ -0.65
TVP23A-207ENST00000573360 PRR20AP86496 221 aa11□□□□□ -0.65
TVP23A-207ENST00000573360 C1orf122Q6ZSJ8 110 aa11□□□□□ -0.65
TVP23A-207ENST00000573360 BORCS7Q96B45 105 aa11□□□□□ -0.65
TVP23A-207ENST00000573360 DNAJC4Q9NNZ3 241 aa11□□□□□ -0.65
TVP23A-207ENST00000573360 V9GYV3 84 aa11□□□□□ -0.65
TVP23A-207ENST00000573360 IGHV3-11P01762 117 aa11□□□□□ -0.65
TVP23A-207ENST00000573360 IGHV4-59P01825 116 aa11□□□□□ -0.65
TVP23A-207ENST00000573360 GNG5P63218 68 aa11□□□□□ -0.65
TVP23A-207ENST00000573360 LBHQ53QV2 105 aaPredicted RBP11□□□□□ -0.65
TVP23A-207ENST00000573360 C2orf83Q53S99 150 aa11□□□□□ -0.65
TVP23A-207ENST00000573360 PAXXQ9BUH6 204 aa11□□□□□ -0.65
TVP23A-207ENST00000573360 OR2T8A6NH00 312 aa11□□□□□ -0.65
TVP23A-207ENST00000573360 MRGPRG-AS1Q2M3A8 158 aa11□□□□□ -0.65
TVP23A-207ENST00000573360 DEFB112Q30KQ8 113 aa11□□□□□ -0.65
TVP23A-207ENST00000573360 C10orf113Q5VZT2 155 aa11□□□□□ -0.65
TVP23A-207ENST00000573360 VWC2LB2RUY7 222 aa10.99□□□□□ -0.65
TVP23A-207ENST00000573360 GNG7O60262 68 aa10.99□□□□□ -0.65
TVP23A-207ENST00000573360 SLC25A5P05141 298 aaKnown RBP10.99□□□□□ -0.65
TVP23A-207ENST00000573360 PSMG3-AS1Q96PY0 264 aa10.99□□□□□ -0.65
TVP23A-207ENST00000573360 SORL1Q92673 2214 aa10.99□□□□□ -0.65
TVP23A-207ENST00000573360 TEX22C9J3V5 150 aa10.99□□□□□ -0.65
TVP23A-207ENST00000573360 ZNF207O43670 478 aaKnown RBP10.99□□□□□ -0.65
TVP23A-207ENST00000573360 APCSP02743 223 aa10.99□□□□□ -0.65
TVP23A-207ENST00000573360 Q6ZS46 218 aa10.99□□□□□ -0.65
TVP23A-207ENST00000573360 OR4A5Q8NH83 315 aa10.99□□□□□ -0.65
TVP23A-207ENST00000573360 TP53TG3Q9ULZ0 132 aa10.99□□□□□ -0.65
TVP23A-207ENST00000573360 HSBP1O75506 76 aa10.99□□□□□ -0.65
TVP23A-207ENST00000573360 WDR73Q6P4I2 378 aa10.99□□□□□ -0.65
TVP23A-207ENST00000573360 SSBP4Q9BWG4 385 aaPredicted RBP10.99□□□□□ -0.65
TVP23A-207ENST00000573360 IGHV3-66A0A0C4DH42 116 aa10.98□□□□□ -0.65
TVP23A-207ENST00000573360 C9JCJ5 164 aa10.98□□□□□ -0.65
TVP23A-207ENST00000573360 RNASEKQ6P5S7 137 aaKnown RBP10.98□□□□□ -0.65
TVP23A-207ENST00000573360 Q8N9W7 124 aa10.98□□□□□ -0.65
TVP23A-207ENST00000573360 NRN1Q9NPD7 142 aa10.98□□□□□ -0.65
TVP23A-207ENST00000573360 TFPI2P48307 235 aa10.98□□□□□ -0.65
TVP23A-207ENST00000573360 DSCR9P59020 149 aa10.98□□□□□ -0.65
TVP23A-207ENST00000573360 FBXL7Q9UJT9 491 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms