RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 ISLRO14498 428 aa10.12□□□□□ -0.79
HERPUD1-218ENST00000569569 SOCS3O14543 225 aa10.12□□□□□ -0.79
HERPUD1-218ENST00000569569 CAMLGP49069 296 aa10.12□□□□□ -0.79
HERPUD1-218ENST00000569569 LRRC37A5PQ49AS3 106 aa10.12□□□□□ -0.79
HERPUD1-218ENST00000569569 TMEM41BQ5BJD5 291 aa10.12□□□□□ -0.79
HERPUD1-218ENST00000569569 PATE2Q6UY27 113 aa10.12□□□□□ -0.79
HERPUD1-218ENST00000569569 LINC00052Q96N35 136 aa10.12□□□□□ -0.79
HERPUD1-218ENST00000569569 SCRT1Q9BWW7 348 aa10.12□□□□□ -0.79
HERPUD1-218ENST00000569569 SLC25A31Q9H0C2 315 aa10.12□□□□□ -0.79
HERPUD1-218ENST00000569569 ARV1Q9H2C2 271 aa10.12□□□□□ -0.79
HERPUD1-218ENST00000569569 WDR83OSQ9Y284 106 aa10.12□□□□□ -0.79
HERPUD1-218ENST00000569569 CSMD3Q7Z407 3707 aa10.11□□□□□ -0.79
HERPUD1-218ENST00000569569 RPL7P18124 248 aaKnown RBP10.11□□□□□ -0.79
HERPUD1-218ENST00000569569 Q6ZRG5 221 aa10.11□□□□□ -0.79
HERPUD1-218ENST00000569569 PPP1R1CQ8WVI7 109 aa10.11□□□□□ -0.79
HERPUD1-218ENST00000569569 C16orf92Q96LL3 132 aa10.11□□□□□ -0.79
HERPUD1-218ENST00000569569 UHRF2Q96PU4 802 aa10.11□□□□□ -0.79
HERPUD1-218ENST00000569569 RARRES2Q99969 163 aa10.11□□□□□ -0.79
HERPUD1-218ENST00000569569 OR5AC2Q9NZP5 309 aa10.11□□□□□ -0.79
HERPUD1-218ENST00000569569 ELOA3CA0A087WX78 387 aaPredicted RBP10.1□□□□□ -0.79
HERPUD1-218ENST00000569569 A0A0J9YWU9 116 aa10.1□□□□□ -0.79
HERPUD1-218ENST00000569569 H0YIZ8 118 aa10.1□□□□□ -0.79
HERPUD1-218ENST00000569569 H3BMM0 161 aa10.1□□□□□ -0.79
HERPUD1-218ENST00000569569 GIG44P09565 113 aaPredicted RBP10.1□□□□□ -0.79
HERPUD1-218ENST00000569569 HLA-DRB4P13762 266 aa10.1□□□□□ -0.79
HERPUD1-218ENST00000569569 ATF4P18848 351 aaPredicted RBP10.1□□□□□ -0.79
HERPUD1-218ENST00000569569 NUTF2P61970 127 aaKnown RBP10.1□□□□□ -0.79
HERPUD1-218ENST00000569569 NHLH2Q02577 135 aa10.1□□□□□ -0.79
HERPUD1-218ENST00000569569 BAXQ07812 192 aa10.1□□□□□ -0.79
HERPUD1-218ENST00000569569 ZFAND6Q6FIF0 208 aa10.1□□□□□ -0.79
HERPUD1-218ENST00000569569 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.1□□□□□ -0.79
HERPUD1-218ENST00000569569 OR11H2Q8NH07 326 aa10.1□□□□□ -0.79
HERPUD1-218ENST00000569569 C17orf77Q96MU5 243 aa10.1□□□□□ -0.79
HERPUD1-218ENST00000569569 HLA-DRB4X5D2U9 266 aa10.1□□□□□ -0.79
HERPUD1-218ENST00000569569 UBE2L5PA0A1B0GUS4 154 aa10.09□□□□□ -0.79
HERPUD1-218ENST00000569569 COX7A2P2O60397 106 aa10.09□□□□□ -0.79
HERPUD1-218ENST00000569569 MPC2O95563 127 aa10.09□□□□□ -0.79
HERPUD1-218ENST00000569569 PET100P0DJ07 73 aa10.09□□□□□ -0.79
HERPUD1-218ENST00000569569 RPL29P47914 159 aaKnown RBP10.09□□□□□ -0.79
HERPUD1-218ENST00000569569 EWSR1Q01844 656 aaKnown RBP eCLIP10.09□□□□□ -0.79
HERPUD1-218ENST00000569569 FGL1Q08830 312 aa10.09□□□□□ -0.79
HERPUD1-218ENST00000569569 SPATA31B1PQ5VZV4 182 aa10.09□□□□□ -0.79
HERPUD1-218ENST00000569569 MIC13Q5XKP0 118 aa10.09□□□□□ -0.79
HERPUD1-218ENST00000569569 FOXI2Q6ZQN5 318 aa10.09□□□□□ -0.79
HERPUD1-218ENST00000569569 LINC00305Q7Z4B0 112 aa10.09□□□□□ -0.79
HERPUD1-218ENST00000569569 OR5C1Q8NGR4 320 aa10.09□□□□□ -0.79
HERPUD1-218ENST00000569569 CHAC2Q8WUX2 184 aa10.09□□□□□ -0.79
HERPUD1-218ENST00000569569 TMEM37Q8WXS4 190 aa10.09□□□□□ -0.79
HERPUD1-218ENST00000569569 RNF126Q9BV68 326 aa10.09□□□□□ -0.79
HERPUD1-218ENST00000569569 SAV1Q9H4B6 383 aaPredicted RBP10.09□□□□□ -0.79
HERPUD1-218ENST00000569569 DNAJC4Q9NNZ3 241 aa10.09□□□□□ -0.79
HERPUD1-218ENST00000569569 RPRMQ9NS64 109 aa10.09□□□□□ -0.79
HERPUD1-218ENST00000569569 ALG5Q9Y673 324 aa10.09□□□□□ -0.79
HERPUD1-218ENST00000569569 MPDU1O75352 247 aa10.08□□□□□ -0.8
HERPUD1-218ENST00000569569 C4BPBP20851 252 aa10.08□□□□□ -0.8
HERPUD1-218ENST00000569569 FGF7P21781 194 aa10.08□□□□□ -0.8
HERPUD1-218ENST00000569569 PRR20EP86478 221 aa10.08□□□□□ -0.8
HERPUD1-218ENST00000569569 PRR20CP86479 221 aa10.08□□□□□ -0.8
HERPUD1-218ENST00000569569 PRR20DP86480 221 aa10.08□□□□□ -0.8
HERPUD1-218ENST00000569569 PRR20BP86481 221 aa10.08□□□□□ -0.8
HERPUD1-218ENST00000569569 PRR20AP86496 221 aa10.08□□□□□ -0.8
HERPUD1-218ENST00000569569 OPCMLQ14982 345 aa10.08□□□□□ -0.8
HERPUD1-218ENST00000569569 GDF5OSQ5U4N7 250 aa10.08□□□□□ -0.8
HERPUD1-218ENST00000569569 C10orf113Q5VZT2 155 aa10.08□□□□□ -0.8
HERPUD1-218ENST00000569569 EBLN2Q6P2I7 272 aa10.08□□□□□ -0.8
HERPUD1-218ENST00000569569 OR1L4Q8NGR5 311 aa10.08□□□□□ -0.8
HERPUD1-218ENST00000569569 C1QTNF4Q9BXJ3 329 aa10.08□□□□□ -0.8
HERPUD1-218ENST00000569569 A0A087X0K7 114 aa10.07□□□□□ -0.8
HERPUD1-218ENST00000569569 DEFB1P60022 68 aa10.07□□□□□ -0.8
HERPUD1-218ENST00000569569 B2MP61769 119 aa10.07□□□□□ -0.8
HERPUD1-218ENST00000569569 BPIFA4PQ86YQ2 179 aa10.07□□□□□ -0.8
HERPUD1-218ENST00000569569 C20orf173Q96LM9 149 aa10.07□□□□□ -0.8
HERPUD1-218ENST00000569569 CLUHP3Q96NS8 147 aa10.07□□□□□ -0.8
HERPUD1-218ENST00000569569 PFDN5Q99471 154 aa10.07□□□□□ -0.8
HERPUD1-218ENST00000569569 SLC39A9Q9NUM3 307 aa10.07□□□□□ -0.8
HERPUD1-218ENST00000569569 TENM2Q9NT68 2774 aa10.06□□□□□ -0.8
HERPUD1-218ENST00000569569 MRPS12O15235 138 aaKnown RBP10.06□□□□□ -0.8
HERPUD1-218ENST00000569569 CSNK1G2-AS1Q8NCQ2 148 aa10.06□□□□□ -0.8
HERPUD1-218ENST00000569569 OR4B1Q8NGF8 309 aa10.06□□□□□ -0.8
HERPUD1-218ENST00000569569 LRRC20Q8TCA0 184 aa10.06□□□□□ -0.8
HERPUD1-218ENST00000569569 NPCDR1Q9BY65 106 aa10.06□□□□□ -0.8
HERPUD1-218ENST00000569569 PXMP4Q9Y6I8 212 aa10.06□□□□□ -0.8
HERPUD1-218ENST00000569569 KMT2CQ8NEZ4 4911 aaKnown RBP10.06□□□□□ -0.8
HERPUD1-218ENST00000569569 STARD9Q9P2P6 4700 aa10.05□□□□□ -0.8
HERPUD1-218ENST00000569569 TRAV8-2A0A0B4J237 113 aa10.05□□□□□ -0.8
HERPUD1-218ENST00000569569 A0A0J9YX75 114 aa10.05□□□□□ -0.8
HERPUD1-218ENST00000569569 F6UB75 175 aa10.05□□□□□ -0.8
HERPUD1-218ENST00000569569 IGKV3-20P01619 116 aa10.05□□□□□ -0.8
HERPUD1-218ENST00000569569 CXCL3P19876 107 aa10.05□□□□□ -0.8
HERPUD1-218ENST00000569569 CLINT1Q14677 625 aa10.05□□□□□ -0.8
HERPUD1-218ENST00000569569 IGFL4Q6B9Z1 124 aa10.05□□□□□ -0.8
HERPUD1-218ENST00000569569 MED28Q9H204 178 aa10.05□□□□□ -0.8
HERPUD1-218ENST00000569569 CLEC5AQ9NY25 188 aa10.05□□□□□ -0.8
HERPUD1-218ENST00000569569 XCL2Q9UBD3 114 aa10.05□□□□□ -0.8
HERPUD1-218ENST00000569569 ZNF705EA8MWA4 302 aaPredicted RBP10.04□□□□□ -0.8
HERPUD1-218ENST00000569569 CXCL2P19875 107 aa10.04□□□□□ -0.8
HERPUD1-218ENST00000569569 RPL12P30050 165 aaKnown RBP10.04□□□□□ -0.8
HERPUD1-218ENST00000569569 FAM78BQ5VT40 261 aa10.04□□□□□ -0.8
HERPUD1-218ENST00000569569 MORN5Q5VZ52 161 aa10.04□□□□□ -0.8
HERPUD1-218ENST00000569569 RNF182Q8N6D2 247 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms