RNA–Protein interactions for RNA: ENST00000569390.1

NEIL1-222, Transcript of nei like DNA glycosylase 1, human

TSL 3

Gene NEIL1, Length 346 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEIL1-222	ENST00000569390	FAM240B	A0A1B0GVZ2	78 aa		13.52	□□□□□ -0.25
NEIL1-222	ENST00000569390	C7orf66	A4D0T2	115 aa		13.52	□□□□□ -0.25
NEIL1-222	ENST00000569390	SMIM9	A6NGZ8	99 aa		13.52	□□□□□ -0.25
NEIL1-222	ENST00000569390	CCNK	O75909	580 aa		13.52	□□□□□ -0.25
NEIL1-222	ENST00000569390	HLA-DMB	P28068	263 aa		13.52	□□□□□ -0.25
NEIL1-222	ENST00000569390	PSG9	Q00887	426 aa		13.52	□□□□□ -0.25
NEIL1-222	ENST00000569390	MZT2B	Q6NZ67	158 aa		13.52	□□□□□ -0.25
NEIL1-222	ENST00000569390	ZNF705A	Q6ZN79	300 aa	Predicted RBP	13.52	□□□□□ -0.25
NEIL1-222	ENST00000569390	ZNF546	Q86UE3	836 aa		13.52	□□□□□ -0.25
NEIL1-222	ENST00000569390	SCRT1	Q9BWW7	348 aa		13.52	□□□□□ -0.25
NEIL1-222	ENST00000569390	DOK5	Q9P104	306 aa		13.52	□□□□□ -0.25
NEIL1-222	ENST00000569390	ELOA3C	A0A087WX78	387 aa	Predicted RBP	13.51	□□□□□ -0.25
NEIL1-222	ENST00000569390	TRAV10	A0A0B4J240	114 aa		13.51	□□□□□ -0.25
NEIL1-222	ENST00000569390	TMEM189	A5PLL7	270 aa		13.51	□□□□□ -0.25
NEIL1-222	ENST00000569390	FAM25E	A8MYX2	175 aa		13.51	□□□□□ -0.25
NEIL1-222	ENST00000569390	CCS	O14618	274 aa		13.51	□□□□□ -0.25
NEIL1-222	ENST00000569390	DEDD	O75618	318 aa		13.51	□□□□□ -0.25
NEIL1-222	ENST00000569390	IGKV3-20	P01619	116 aa		13.51	□□□□□ -0.25
NEIL1-222	ENST00000569390	H2AFB2	P0C5Z0	115 aa		13.51	□□□□□ -0.25
NEIL1-222	ENST00000569390	OR5G3	P0C626	314 aa		13.51	□□□□□ -0.25
NEIL1-222	ENST00000569390	FAM78B	Q5VT40	261 aa		13.51	□□□□□ -0.25
NEIL1-222	ENST00000569390	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		13.51	□□□□□ -0.25
NEIL1-222	ENST00000569390	C12orf45	Q8N5I9	185 aa	Predicted RBP	13.51	□□□□□ -0.25
NEIL1-222	ENST00000569390	C5orf51	A6NDU8	294 aa		13.5	□□□□□ -0.25
NEIL1-222	ENST00000569390	ZNF705F	A8MVS1	300 aa	Predicted RBP	13.5	□□□□□ -0.25
NEIL1-222	ENST00000569390	GOSR2	O14653	212 aa		13.5	□□□□□ -0.25
NEIL1-222	ENST00000569390	ZNF705D	P0CH99	300 aa	Predicted RBP	13.5	□□□□□ -0.25
NEIL1-222	ENST00000569390	ZNF705B	P0CI00	300 aa	Predicted RBP	13.5	□□□□□ -0.25
NEIL1-222	ENST00000569390	PVALB	P20472	110 aa	Predicted RBP	13.5	□□□□□ -0.25
NEIL1-222	ENST00000569390	DEFB1	P60022	68 aa		13.5	□□□□□ -0.25
NEIL1-222	ENST00000569390	ZNF709	Q8N972	641 aa		13.5	□□□□□ -0.25
NEIL1-222	ENST00000569390	C2orf50	Q96LR7	162 aa		13.5	□□□□□ -0.25
NEIL1-222	ENST00000569390	SEC22C	Q9BRL7	303 aa		13.5	□□□□□ -0.25
NEIL1-222	ENST00000569390		A8MTW9	85 aa		13.49	□□□□□ -0.25
NEIL1-222	ENST00000569390	DUSP14	O95147	198 aa	Known RBP	13.49	□□□□□ -0.25
NEIL1-222	ENST00000569390	C17orf77	Q96MU5	243 aa		13.49	□□□□□ -0.25
NEIL1-222	ENST00000569390	ARL6	Q9H0F7	186 aa		13.49	□□□□□ -0.25
NEIL1-222	ENST00000569390	GOLT1B	Q9Y3E0	138 aa		13.49	□□□□□ -0.25
NEIL1-222	ENST00000569390	LSM5	Q9Y4Y9	91 aa	Known RBP	13.49	□□□□□ -0.25
NEIL1-222	ENST00000569390		F6UB75	175 aa		13.48	□□□□□ -0.25
NEIL1-222	ENST00000569390	AMBP	P02760	352 aa		13.48	□□□□□ -0.25
NEIL1-222	ENST00000569390	SLC38A11	Q08AI6	406 aa		13.48	□□□□□ -0.25
NEIL1-222	ENST00000569390	ASAH1	Q13510	395 aa		13.48	□□□□□ -0.25
NEIL1-222	ENST00000569390	RAB31	Q13636	194 aa		13.48	□□□□□ -0.25
NEIL1-222	ENST00000569390		Q6ZTC4	211 aa		13.48	□□□□□ -0.25
NEIL1-222	ENST00000569390	C20orf173	Q96LM9	149 aa		13.48	□□□□□ -0.25
NEIL1-222	ENST00000569390	SLC35B3	Q9H1N7	401 aa		13.48	□□□□□ -0.25
NEIL1-222	ENST00000569390	ARV1	Q9H2C2	271 aa		13.48	□□□□□ -0.25
NEIL1-222	ENST00000569390	RFNG	Q9Y644	331 aa		13.48	□□□□□ -0.25
NEIL1-222	ENST00000569390		A0A087X0K7	114 aa		13.47	□□□□□ -0.25
NEIL1-222	ENST00000569390	TEX48	A0A1B0GUV7	120 aa		13.47	□□□□□ -0.25
NEIL1-222	ENST00000569390	IGLL5	B9A064	214 aa		13.47	□□□□□ -0.25
NEIL1-222	ENST00000569390	AGPAT2	O15120	278 aa		13.47	□□□□□ -0.25
NEIL1-222	ENST00000569390	BCAP31	P51572	246 aa		13.47	□□□□□ -0.25
NEIL1-222	ENST00000569390	CAV2	P51636	162 aa		13.47	□□□□□ -0.25
NEIL1-222	ENST00000569390	FXYD7	P58549	80 aa		13.47	□□□□□ -0.25
NEIL1-222	ENST00000569390	FGL1	Q08830	312 aa		13.47	□□□□□ -0.25
NEIL1-222	ENST00000569390	ARL16	Q0P5N6	197 aa		13.47	□□□□□ -0.25
NEIL1-222	ENST00000569390	GSG1L	Q6UXU4	331 aa		13.47	□□□□□ -0.25
NEIL1-222	ENST00000569390	UHRF2	Q96PU4	802 aa		13.47	□□□□□ -0.25
NEIL1-222	ENST00000569390	CELA1	Q9UNI1	258 aa		13.46	□□□□□ -0.25
NEIL1-222	ENST00000569390	EPPK1	P58107	5090 aa	Known RBP	13.46	□□□□□ -0.26
NEIL1-222	ENST00000569390	IGHV3OR16-12	A0A075B7B8	117 aa		13.45	□□□□□ -0.26
NEIL1-222	ENST00000569390	TRAV8-2	A0A0B4J237	113 aa		13.45	□□□□□ -0.26
NEIL1-222	ENST00000569390	HBE1	P02100	147 aa		13.45	□□□□□ -0.26
NEIL1-222	ENST00000569390	SPART-AS1	P0CW21	52 aa		13.45	□□□□□ -0.26
NEIL1-222	ENST00000569390	CXCL2	P19875	107 aa		13.45	□□□□□ -0.26
NEIL1-222	ENST00000569390	C12orf74	Q32Q52	190 aa		13.45	□□□□□ -0.26
NEIL1-222	ENST00000569390	PATE2	Q6UY27	113 aa		13.45	□□□□□ -0.26
NEIL1-222	ENST00000569390	LRRC20	Q8TCA0	184 aa		13.45	□□□□□ -0.26
NEIL1-222	ENST00000569390	IGF2BP2-AS1	Q96M15	143 aa		13.45	□□□□□ -0.26
NEIL1-222	ENST00000569390	RNF126	Q9BV68	326 aa		13.45	□□□□□ -0.26
NEIL1-222	ENST00000569390	C11orf1	Q9H5F2	150 aa		13.45	□□□□□ -0.26
NEIL1-222	ENST00000569390	GPN1	Q9HCN4	374 aa	Predicted RBP	13.45	□□□□□ -0.26
NEIL1-222	ENST00000569390	APLN	Q9ULZ1	77 aa		13.45	□□□□□ -0.26
NEIL1-222	ENST00000569390	COX7A2P2	O60397	106 aa		13.44	□□□□□ -0.26
NEIL1-222	ENST00000569390	CAMLG	P49069	296 aa		13.44	□□□□□ -0.26
NEIL1-222	ENST00000569390	CNN1	P51911	297 aa	Known RBP	13.44	□□□□□ -0.26
NEIL1-222	ENST00000569390	S100A10	P60903	97 aa		13.44	□□□□□ -0.26
NEIL1-222	ENST00000569390	AMTN	Q6UX39	209 aa		13.44	□□□□□ -0.26
NEIL1-222	ENST00000569390	LINC00305	Q7Z4B0	112 aa		13.44	□□□□□ -0.26
NEIL1-222	ENST00000569390	STX12	Q86Y82	276 aa		13.44	□□□□□ -0.26
NEIL1-222	ENST00000569390	ZNF738	Q8NE65	137 aa		13.44	□□□□□ -0.26
NEIL1-222	ENST00000569390	ENKUR	Q8TC29	256 aa		13.44	□□□□□ -0.26
NEIL1-222	ENST00000569390	MGST2	Q99735	147 aa		13.44	□□□□□ -0.26
NEIL1-222	ENST00000569390	LYRM2	Q9NU23	88 aa	Predicted RBP	13.44	□□□□□ -0.26
NEIL1-222	ENST00000569390	UQCC1	Q9NVA1	299 aa		13.44	□□□□□ -0.26
NEIL1-222	ENST00000569390	DEFB131B	A0A096LNP1	70 aa		13.43	□□□□□ -0.26
NEIL1-222	ENST00000569390	UPK1B	O75841	260 aa		13.43	□□□□□ -0.26
NEIL1-222	ENST00000569390	CST7	O76096	145 aa		13.43	□□□□□ -0.26
NEIL1-222	ENST00000569390	CXCL3	P19876	107 aa		13.43	□□□□□ -0.26
NEIL1-222	ENST00000569390	S100A11	P31949	105 aa		13.43	□□□□□ -0.26
NEIL1-222	ENST00000569390	SULT1A1	P50225	295 aa		13.43	□□□□□ -0.26
NEIL1-222	ENST00000569390	B2M	P61769	119 aa		13.43	□□□□□ -0.26
NEIL1-222	ENST00000569390	HBG1	P69891	147 aa		13.43	□□□□□ -0.26
NEIL1-222	ENST00000569390	HBG2	P69892	147 aa		13.43	□□□□□ -0.26
NEIL1-222	ENST00000569390	IL15RA	Q13261	267 aa		13.43	□□□□□ -0.26
NEIL1-222	ENST00000569390	LCN15	Q6UWW0	184 aa		13.43	□□□□□ -0.26
NEIL1-222	ENST00000569390		Q6ZRG5	221 aa		13.43	□□□□□ -0.26
NEIL1-222	ENST00000569390	BPIFA4P	Q86YQ2	179 aa		13.43	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms