RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 YTHDF2Q9Y5A9 579 aaKnown RBP6.84□□□□□ -1.31
CLN6-203ENST00000563917 IGKV1OR2-108A0A075B7D4 117 aa6.83□□□□□ -1.32
CLN6-203ENST00000563917 PRSS29PA6NIE9 313 aa6.83□□□□□ -1.32
CLN6-203ENST00000563917 M0R2N4 97 aa6.83□□□□□ -1.32
CLN6-203ENST00000563917 HYPMO75409 117 aa6.83□□□□□ -1.32
CLN6-203ENST00000563917 OR5G3P0C626 314 aa6.83□□□□□ -1.32
CLN6-203ENST00000563917 RHOBP62745 196 aa6.83□□□□□ -1.32
CLN6-203ENST00000563917 CYP2G1PQ6ZSU1 146 aa6.83□□□□□ -1.32
CLN6-203ENST00000563917 TMEM144Q7Z5S9 345 aa6.83□□□□□ -1.32
CLN6-203ENST00000563917 ZNF738Q8NE65 137 aa6.83□□□□□ -1.32
CLN6-203ENST00000563917 MGAT4CQ9UBM8 478 aa6.83□□□□□ -1.32
CLN6-203ENST00000563917 C9orf170A2RU37 121 aa6.82□□□□□ -1.32
CLN6-203ENST00000563917 LYRM9A8MSI8 78 aa6.82□□□□□ -1.32
CLN6-203ENST00000563917 SSSCA1O60232 199 aa6.82□□□□□ -1.32
CLN6-203ENST00000563917 SCGB1D2O95969 90 aa6.82□□□□□ -1.32
CLN6-203ENST00000563917 ANXA7P20073 488 aaKnown RBP6.82□□□□□ -1.32
CLN6-203ENST00000563917 GATA2P23769 480 aaPredicted RBP6.82□□□□□ -1.32
CLN6-203ENST00000563917 POLR2GP62487 172 aaKnown RBP eCLIP6.82□□□□□ -1.32
CLN6-203ENST00000563917 LGALS9BQ3B8N2 356 aa6.82□□□□□ -1.32
CLN6-203ENST00000563917 RNF212Q495C1 297 aa6.82□□□□□ -1.32
CLN6-203ENST00000563917 C4orf46Q504U0 113 aa6.82□□□□□ -1.32
CLN6-203ENST00000563917 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.82□□□□□ -1.32
CLN6-203ENST00000563917 C1orf158Q8N1D5 194 aa6.82□□□□□ -1.32
CLN6-203ENST00000563917 C15orf53Q8NAA6 179 aa6.82□□□□□ -1.32
CLN6-203ENST00000563917 OR10P1Q8NGE3 313 aa6.82□□□□□ -1.32
CLN6-203ENST00000563917 ATG101Q9BSB4 218 aa6.82□□□□□ -1.32
CLN6-203ENST00000563917 SLC25A39Q9BZJ4 359 aaPredicted RBP6.82□□□□□ -1.32
CLN6-203ENST00000563917 V9GYH0 126 aa6.82□□□□□ -1.32
CLN6-203ENST00000563917 GOSR2O14653 212 aa6.81□□□□□ -1.32
CLN6-203ENST00000563917 ADAP1O75689 374 aa6.81□□□□□ -1.32
CLN6-203ENST00000563917 LINC00869P0C866 280 aa6.81□□□□□ -1.32
CLN6-203ENST00000563917 CNN1P51911 297 aaKnown RBP6.81□□□□□ -1.32
CLN6-203ENST00000563917 RRAS2P62070 204 aaPredicted RBP6.81□□□□□ -1.32
CLN6-203ENST00000563917 DLK1P80370 383 aa6.81□□□□□ -1.32
CLN6-203ENST00000563917 ID3Q02535 119 aa6.81□□□□□ -1.32
CLN6-203ENST00000563917 SPINK13Q1W4C9 94 aa6.81□□□□□ -1.32
CLN6-203ENST00000563917 CNPY1Q3B7I2 92 aa6.81□□□□□ -1.32
CLN6-203ENST00000563917 TMEM256Q8N2U0 113 aa6.81□□□□□ -1.32
CLN6-203ENST00000563917 SMIM8Q96KF7 97 aa6.81□□□□□ -1.32
CLN6-203ENST00000563917 C20orf173Q96LM9 149 aa6.81□□□□□ -1.32
CLN6-203ENST00000563917 SHANK2-AS3Q9BTD1 123 aa6.81□□□□□ -1.32
CLN6-203ENST00000563917 SCRT1Q9BWW7 348 aa6.81□□□□□ -1.32
CLN6-203ENST00000563917 ARL6Q9H0F7 186 aa6.81□□□□□ -1.32
CLN6-203ENST00000563917 NPVFQ9HCQ7 196 aa6.81□□□□□ -1.32
CLN6-203ENST00000563917 IGLV2-18A0A075B6J9 118 aa6.8□□□□□ -1.32
CLN6-203ENST00000563917 LINC00854A0A1B0GVQ3 168 aa6.8□□□□□ -1.32
CLN6-203ENST00000563917 PRSS46E5RG02 174 aa6.8□□□□□ -1.32
CLN6-203ENST00000563917 FNDC10F2Z333 226 aa6.8□□□□□ -1.32
CLN6-203ENST00000563917 H3BRN7 92 aa6.8□□□□□ -1.32
CLN6-203ENST00000563917 BOLA2-SMG1P6H3BVE0 249 aa6.8□□□□□ -1.32
CLN6-203ENST00000563917 M0R2Z0 102 aa6.8□□□□□ -1.32
CLN6-203ENST00000563917 OR4E1P0C645 316 aa6.8□□□□□ -1.32
CLN6-203ENST00000563917 METTL15P1P0C7V9 234 aa6.8□□□□□ -1.32
CLN6-203ENST00000563917 DEFB130BP0DP73 79 aa6.8□□□□□ -1.32
CLN6-203ENST00000563917 DEFB130AP0DP74 79 aa6.8□□□□□ -1.32
CLN6-203ENST00000563917 HIST1H1AQ02539 215 aaPredicted RBP6.8□□□□□ -1.32
CLN6-203ENST00000563917 RAB31Q13636 194 aa6.8□□□□□ -1.32
CLN6-203ENST00000563917 ZNF846Q147U1 533 aa6.8□□□□□ -1.32
CLN6-203ENST00000563917 IAH1Q2TAA2 248 aaPredicted RBP6.8□□□□□ -1.32
CLN6-203ENST00000563917 PXDC1Q5TGL8 231 aa6.8□□□□□ -1.32
CLN6-203ENST00000563917 TMEM88Q6PEY1 159 aa6.8□□□□□ -1.32
CLN6-203ENST00000563917 TEPPQ6URK8 271 aa6.8□□□□□ -1.32
CLN6-203ENST00000563917 CCDC190Q86UF4 302 aa6.8□□□□□ -1.32
CLN6-203ENST00000563917 OR11H7Q8NGC8 314 aa6.8□□□□□ -1.32
CLN6-203ENST00000563917 LINC01587Q99440 93 aa6.8□□□□□ -1.32
CLN6-203ENST00000563917 PLA2G2EQ9NZK7 142 aa6.8□□□□□ -1.32
CLN6-203ENST00000563917 GSKIPQ9P0R6 139 aa6.8□□□□□ -1.32
CLN6-203ENST00000563917 KMT2AQ03164 3969 aa6.79□□□□□ -1.32
CLN6-203ENST00000563917 A8MTW9 85 aa6.79□□□□□ -1.32
CLN6-203ENST00000563917 ZNF705GA8MUZ8 300 aaPredicted RBP6.79□□□□□ -1.32
CLN6-203ENST00000563917 F5H768 121 aa6.79□□□□□ -1.32
CLN6-203ENST00000563917 L7N2F9 121 aa6.79□□□□□ -1.32
CLN6-203ENST00000563917 NDUFB6O95139 128 aa6.79□□□□□ -1.32
CLN6-203ENST00000563917 HTN1P15515 57 aa6.79□□□□□ -1.32
CLN6-203ENST00000563917 TSPOP30536 169 aa6.79□□□□□ -1.32
CLN6-203ENST00000563917 FAM3BP58499 235 aaPredicted RBP6.79□□□□□ -1.32
CLN6-203ENST00000563917 PLP1P60201 277 aa6.79□□□□□ -1.32
CLN6-203ENST00000563917 VAMP2P63027 116 aa6.79□□□□□ -1.32
CLN6-203ENST00000563917 PSG3Q16557 428 aa6.79□□□□□ -1.32
CLN6-203ENST00000563917 AMTNQ6UX39 209 aa6.79□□□□□ -1.32
CLN6-203ENST00000563917 TMEM182Q6ZP80 229 aaPredicted RBP6.79□□□□□ -1.32
CLN6-203ENST00000563917 ZNF546Q86UE3 836 aa6.79□□□□□ -1.32
CLN6-203ENST00000563917 RNF182Q8N6D2 247 aa6.79□□□□□ -1.32
CLN6-203ENST00000563917 SRRQ9GZT4 340 aa6.79□□□□□ -1.32
CLN6-203ENST00000563917 ARV1Q9H2C2 271 aa6.79□□□□□ -1.32
CLN6-203ENST00000563917 ZNF701M0R085 212 aaPredicted RBP6.78□□□□□ -1.32
CLN6-203ENST00000563917 COX7A2P2O60397 106 aa6.78□□□□□ -1.32
CLN6-203ENST00000563917 TSC22D2O75157 780 aa6.78□□□□□ -1.32
CLN6-203ENST00000563917 ATP5G1P05496 136 aa6.78□□□□□ -1.32
CLN6-203ENST00000563917 CXCL2P19875 107 aa6.78□□□□□ -1.32
CLN6-203ENST00000563917 CXCL3P19876 107 aa6.78□□□□□ -1.32
CLN6-203ENST00000563917 ATP5G3P48201 142 aa6.78□□□□□ -1.32
CLN6-203ENST00000563917 TAS2R30P59541 319 aa6.78□□□□□ -1.32
CLN6-203ENST00000563917 TAS2R60P59551 318 aa6.78□□□□□ -1.32
CLN6-203ENST00000563917 C1orf134Q5TEV5 83 aa6.78□□□□□ -1.32
CLN6-203ENST00000563917 IGFL4Q6B9Z1 124 aa6.78□□□□□ -1.32
CLN6-203ENST00000563917 LCN15Q6UWW0 184 aa6.78□□□□□ -1.32
CLN6-203ENST00000563917 BPIFA4PQ86YQ2 179 aa6.78□□□□□ -1.32
CLN6-203ENST00000563917 BAP18Q8IXM2 172 aa6.78□□□□□ -1.32
CLN6-203ENST00000563917 OR8A1Q8NGG7 326 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms