RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 ARL6Q9H0F7 186 aa11.67□□□□□ -0.54
USB1-208ENST00000563207 IGHV3-66A0A0C4DH42 116 aa11.66□□□□□ -0.54
USB1-208ENST00000563207 RNF222A6NCQ9 220 aa11.66□□□□□ -0.54
USB1-208ENST00000563207 OR4C46A6NHA9 309 aa11.66□□□□□ -0.54
USB1-208ENST00000563207 OR11H12B2RN74 326 aa11.66□□□□□ -0.54
USB1-208ENST00000563207 CMC4P56277 68 aaPredicted RBP11.66□□□□□ -0.54
USB1-208ENST00000563207 B2MP61769 119 aa11.66□□□□□ -0.54
USB1-208ENST00000563207 TCTE3Q8IZS6 198 aa11.66□□□□□ -0.54
USB1-208ENST00000563207 SMIM3Q9BZL3 60 aa11.66□□□□□ -0.54
USB1-208ENST00000563207 SRD5A3Q9H8P0 318 aa11.66□□□□□ -0.54
USB1-208ENST00000563207 DNAJC4Q9NNZ3 241 aa11.66□□□□□ -0.54
USB1-208ENST00000563207 SLC39A9Q9NUM3 307 aa11.66□□□□□ -0.54
USB1-208ENST00000563207 ZNF98A6NK75 572 aa11.65□□□□□ -0.54
USB1-208ENST00000563207 TAAR5O14804 337 aa11.65□□□□□ -0.54
USB1-208ENST00000563207 OR5G3P0C626 314 aa11.65□□□□□ -0.54
USB1-208ENST00000563207 RPL11P62913 178 aaKnown RBP11.65□□□□□ -0.54
USB1-208ENST00000563207 MIC13Q5XKP0 118 aa11.65□□□□□ -0.54
USB1-208ENST00000563207 SIGLEC15Q6ZMC9 328 aa11.65□□□□□ -0.54
USB1-208ENST00000563207 ST6GAL2Q96JF0 529 aa11.65□□□□□ -0.54
USB1-208ENST00000563207 SLC25A39Q9BZJ4 359 aaPredicted RBP11.65□□□□□ -0.54
USB1-208ENST00000563207 ARV1Q9H2C2 271 aa11.65□□□□□ -0.54
USB1-208ENST00000563207 PXMP4Q9Y6I8 212 aa11.65□□□□□ -0.54
USB1-208ENST00000563207 H3BRN7 92 aa11.64□□□□□ -0.55
USB1-208ENST00000563207 DNASE2O00115 360 aaPredicted RBP11.64□□□□□ -0.55
USB1-208ENST00000563207 ARPC5O15511 151 aa11.64□□□□□ -0.55
USB1-208ENST00000563207 COX7A2P2O60397 106 aa11.64□□□□□ -0.55
USB1-208ENST00000563207 ZNF345Q14585 488 aa11.64□□□□□ -0.55
USB1-208ENST00000563207 C10orf113Q5VZT2 155 aa11.64□□□□□ -0.55
USB1-208ENST00000563207 PATE2Q6UY27 113 aa11.64□□□□□ -0.55
USB1-208ENST00000563207 OR8I2Q8N0Y5 310 aa11.64□□□□□ -0.55
USB1-208ENST00000563207 GATAD1Q8WUU5 269 aa11.64□□□□□ -0.55
USB1-208ENST00000563207 SHANK2-AS3Q9BTD1 123 aa11.64□□□□□ -0.55
USB1-208ENST00000563207 MFFQ9GZY8 342 aa11.64□□□□□ -0.55
USB1-208ENST00000563207 MS4A6AQ9H2W1 248 aa11.64□□□□□ -0.55
USB1-208ENST00000563207 WFDC1Q9HC57 220 aa11.64□□□□□ -0.55
USB1-208ENST00000563207 PLECQ15149 4684 aaKnown RBP11.64□□□□□ -0.55
USB1-208ENST00000563207 SMLR1H3BR10 107 aa11.63□□□□□ -0.55
USB1-208ENST00000563207 GALR1P47211 349 aa11.63□□□□□ -0.55
USB1-208ENST00000563207 SAMD13Q5VXD3 122 aa11.63□□□□□ -0.55
USB1-208ENST00000563207 LINC00305Q7Z4B0 112 aa11.63□□□□□ -0.55
USB1-208ENST00000563207 AKAP14Q86UN6 197 aa11.63□□□□□ -0.55
USB1-208ENST00000563207 SEPSECSQ9HD40 501 aaKnown RBP11.63□□□□□ -0.55
USB1-208ENST00000563207 DOK5Q9P104 306 aa11.63□□□□□ -0.55
USB1-208ENST00000563207 TIMM9Q9Y5J7 89 aa11.63□□□□□ -0.55
USB1-208ENST00000563207 hCG_2014768A0A024R1R8 64 aa11.62□□□□□ -0.55
USB1-208ENST00000563207 BORCS7-ASMTA0A0B4J1R7 106 aa11.62□□□□□ -0.55
USB1-208ENST00000563207 A0A0D9SG52 128 aa11.62□□□□□ -0.55
USB1-208ENST00000563207 RPL7P18124 248 aaKnown RBP11.62□□□□□ -0.55
USB1-208ENST00000563207 TMEM37Q8WXS4 190 aa11.62□□□□□ -0.55
USB1-208ENST00000563207 NRN1Q9NPD7 142 aa11.62□□□□□ -0.55
USB1-208ENST00000563207 IGKV3-7A0A075B6H7 116 aa11.61□□□□□ -0.55
USB1-208ENST00000563207 JTBO76095 146 aa11.61□□□□□ -0.55
USB1-208ENST00000563207 MEOX2P50222 304 aa11.61□□□□□ -0.55
USB1-208ENST00000563207 KCNRGQ8N5I3 272 aa11.61□□□□□ -0.55
USB1-208ENST00000563207 STXBP6Q8NFX7 210 aa11.61□□□□□ -0.55
USB1-208ENST00000563207 OR11H4Q8NGC9 324 aa11.61□□□□□ -0.55
USB1-208ENST00000563207 DCANP1Q8TF63 244 aa11.61□□□□□ -0.55
USB1-208ENST00000563207 UHRF2Q96PU4 802 aa11.61□□□□□ -0.55
USB1-208ENST00000563207 SLC25A22Q9H936 323 aa11.61□□□□□ -0.55
USB1-208ENST00000563207 K7EQG2 157 aa11.6□□□□□ -0.55
USB1-208ENST00000563207 C1QBP02746 253 aa11.6□□□□□ -0.55
USB1-208ENST00000563207 BPIFA4PQ86YQ2 179 aa11.6□□□□□ -0.55
USB1-208ENST00000563207 GBGT1Q8N5D6 347 aa11.6□□□□□ -0.55
USB1-208ENST00000563207 PSMG3Q9BT73 122 aaPredicted RBP11.6□□□□□ -0.55
USB1-208ENST00000563207 RSG1Q9BU20 258 aa11.6□□□□□ -0.55
USB1-208ENST00000563207 SCRT1Q9BWW7 348 aa11.6□□□□□ -0.55
USB1-208ENST00000563207 SLC25A32Q9H2D1 315 aa11.6□□□□□ -0.55
USB1-208ENST00000563207 TFPI2P48307 235 aa11.59□□□□□ -0.55
USB1-208ENST00000563207 SERF2P84101 59 aa11.59□□□□□ -0.55
USB1-208ENST00000563207 OR2G3Q8NGZ4 309 aa11.59□□□□□ -0.55
USB1-208ENST00000563207 GNPNAT1Q96EK6 184 aaPredicted RBP11.59□□□□□ -0.55
USB1-208ENST00000563207 HYLS1Q96M11 299 aa11.59□□□□□ -0.55
USB1-208ENST00000563207 MRPL32Q9BYC8 188 aaKnown RBP11.59□□□□□ -0.55
USB1-208ENST00000563207 UBQLN2Q9UHD9 624 aa11.59□□□□□ -0.55
USB1-208ENST00000563207 A0A1B0GVG6 124 aa11.58□□□□□ -0.56
USB1-208ENST00000563207 ID1P41134 155 aa11.58□□□□□ -0.56
USB1-208ENST00000563207 SNRPD3P62318 126 aaKnown RBP11.58□□□□□ -0.56
USB1-208ENST00000563207 ACOT6Q3I5F7 207 aaPredicted RBP11.58□□□□□ -0.56
USB1-208ENST00000563207 FFAR4Q5NUL3 377 aa11.58□□□□□ -0.56
USB1-208ENST00000563207 FAM78BQ5VT40 261 aa11.58□□□□□ -0.56
USB1-208ENST00000563207 LEMD1Q68G75 181 aa11.58□□□□□ -0.56
USB1-208ENST00000563207 WFDC3Q8IUB2 231 aa11.58□□□□□ -0.56
USB1-208ENST00000563207 ARPC5LQ9BPX5 153 aa11.58□□□□□ -0.56
USB1-208ENST00000563207 A0A087X0K7 114 aa11.57□□□□□ -0.56
USB1-208ENST00000563207 MBP02144 154 aa11.57□□□□□ -0.56
USB1-208ENST00000563207 ATF4P18848 351 aaPredicted RBP11.57□□□□□ -0.56
USB1-208ENST00000563207 M6PRP20645 277 aa11.57□□□□□ -0.56
USB1-208ENST00000563207 ATP6V0CP27449 155 aa11.57□□□□□ -0.56
USB1-208ENST00000563207 ODF3L2Q3SX64 289 aa11.57□□□□□ -0.56
USB1-208ENST00000563207 RPL7L1Q6DKI1 246 aaKnown RBP11.57□□□□□ -0.56
USB1-208ENST00000563207 HSD17B11Q8NBQ5 300 aa11.57□□□□□ -0.56
USB1-208ENST00000563207 OVOL2Q9BRP0 275 aa11.57□□□□□ -0.56
USB1-208ENST00000563207 KANTRA0A1W2PQU2 76 aa11.56□□□□□ -0.56
USB1-208ENST00000563207 ISLRO14498 428 aa11.56□□□□□ -0.56
USB1-208ENST00000563207 CXCL2P19875 107 aa11.56□□□□□ -0.56
USB1-208ENST00000563207 PSMB3P49720 205 aa11.56□□□□□ -0.56
USB1-208ENST00000563207 RHOBP62745 196 aa11.56□□□□□ -0.56
USB1-208ENST00000563207 MAP6D1Q9H9H5 199 aa11.56□□□□□ -0.56
USB1-208ENST00000563207 FUT9Q9Y231 359 aa11.56□□□□□ -0.56
USB1-208ENST00000563207 MRPS12O15235 138 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms