RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 WDR83OSQ9Y284 106 aa12.18□□□□□ -0.46
CDT1-202ENST00000562747 H0YIZ8 118 aa12.17□□□□□ -0.46
CDT1-202ENST00000562747 OR5G3P0C626 314 aa12.17□□□□□ -0.46
CDT1-202ENST00000562747 ID1P41134 155 aa12.17□□□□□ -0.46
CDT1-202ENST00000562747 CAMLGP49069 296 aa12.17□□□□□ -0.46
CDT1-202ENST00000562747 MEOX2P50222 304 aa12.17□□□□□ -0.46
CDT1-202ENST00000562747 KRTAP17-1Q9BYP8 105 aa12.17□□□□□ -0.46
CDT1-202ENST00000562747 UBE2L5PA0A1B0GUS4 154 aa12.16□□□□□ -0.46
CDT1-202ENST00000562747 SOCS3O14543 225 aa12.16□□□□□ -0.46
CDT1-202ENST00000562747 SPRY2O43597 315 aa12.16□□□□□ -0.46
CDT1-202ENST00000562747 MPC2O95563 127 aa12.16□□□□□ -0.46
CDT1-202ENST00000562747 PSMB3P49720 205 aa12.16□□□□□ -0.46
CDT1-202ENST00000562747 EWSR1Q01844 656 aaKnown RBP eCLIP12.16□□□□□ -0.46
CDT1-202ENST00000562747 BAXQ07812 192 aa12.16□□□□□ -0.46
CDT1-202ENST00000562747 DEFB135Q30KP9 77 aa12.16□□□□□ -0.46
CDT1-202ENST00000562747 TRPT1Q86TN4 253 aaKnown RBP12.16□□□□□ -0.46
CDT1-202ENST00000562747 RNF183Q96D59 192 aa12.16□□□□□ -0.46
CDT1-202ENST00000562747 SCRT1Q9BWW7 348 aa12.16□□□□□ -0.46
CDT1-202ENST00000562747 ARV1Q9H2C2 271 aa12.16□□□□□ -0.46
CDT1-202ENST00000562747 MPDU1O75352 247 aa12.15□□□□□ -0.46
CDT1-202ENST00000562747 NHLH2Q02577 135 aa12.15□□□□□ -0.46
CDT1-202ENST00000562747 ACTL10Q5JWF8 245 aa12.15□□□□□ -0.46
CDT1-202ENST00000562747 PATE2Q6UY27 113 aa12.15□□□□□ -0.46
CDT1-202ENST00000562747 CHAC2Q8WUX2 184 aa12.15□□□□□ -0.46
CDT1-202ENST00000562747 UHRF2Q96PU4 802 aa12.15□□□□□ -0.46
CDT1-202ENST00000562747 FRAS1Q86XX4 4008 aa12.15□□□□□ -0.47
CDT1-202ENST00000562747 ELOA3CA0A087WX78 387 aaPredicted RBP12.14□□□□□ -0.47
CDT1-202ENST00000562747 KNCNA6PVL3 124 aa12.14□□□□□ -0.47
CDT1-202ENST00000562747 ISLRO14498 428 aa12.14□□□□□ -0.47
CDT1-202ENST00000562747 SPP1P10451 314 aa12.14□□□□□ -0.47
CDT1-202ENST00000562747 RPL7P18124 248 aaKnown RBP12.14□□□□□ -0.47
CDT1-202ENST00000562747 RPL29P47914 159 aaKnown RBP12.14□□□□□ -0.47
CDT1-202ENST00000562747 PRR20EP86478 221 aa12.14□□□□□ -0.47
CDT1-202ENST00000562747 PRR20CP86479 221 aa12.14□□□□□ -0.47
CDT1-202ENST00000562747 PRR20DP86480 221 aa12.14□□□□□ -0.47
CDT1-202ENST00000562747 PRR20BP86481 221 aa12.14□□□□□ -0.47
CDT1-202ENST00000562747 PRR20AP86496 221 aa12.14□□□□□ -0.47
CDT1-202ENST00000562747 RGS21Q2M5E4 152 aa12.14□□□□□ -0.47
CDT1-202ENST00000562747 MORN3Q6PF18 240 aaPredicted RBP12.14□□□□□ -0.47
CDT1-202ENST00000562747 Q6ZRG5 221 aa12.14□□□□□ -0.47
CDT1-202ENST00000562747 OR5C1Q8NGR4 320 aa12.14□□□□□ -0.47
CDT1-202ENST00000562747 RSG1Q9BU20 258 aa12.14□□□□□ -0.47
CDT1-202ENST00000562747 RNF126Q9BV68 326 aa12.14□□□□□ -0.47
CDT1-202ENST00000562747 COX7A2P2O60397 106 aa12.13□□□□□ -0.47
CDT1-202ENST00000562747 CA1P00915 261 aaPredicted RBP12.13□□□□□ -0.47
CDT1-202ENST00000562747 FGF7P21781 194 aa12.13□□□□□ -0.47
CDT1-202ENST00000562747 OPCMLQ14982 345 aa12.13□□□□□ -0.47
CDT1-202ENST00000562747 TMEM41BQ5BJD5 291 aa12.13□□□□□ -0.47
CDT1-202ENST00000562747 MIC13Q5XKP0 118 aa12.13□□□□□ -0.47
CDT1-202ENST00000562747 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.13□□□□□ -0.47
CDT1-202ENST00000562747 LINC00305Q7Z4B0 112 aa12.13□□□□□ -0.47
CDT1-202ENST00000562747 GATAD1Q8WUU5 269 aa12.13□□□□□ -0.47
CDT1-202ENST00000562747 MED28Q9H204 178 aa12.13□□□□□ -0.47
CDT1-202ENST00000562747 ATF4P18848 351 aaPredicted RBP12.12□□□□□ -0.47
CDT1-202ENST00000562747 CXCL3P19876 107 aa12.12□□□□□ -0.47
CDT1-202ENST00000562747 OR1L4Q8NGR5 311 aa12.12□□□□□ -0.47
CDT1-202ENST00000562747 TMEM37Q8WXS4 190 aa12.12□□□□□ -0.47
CDT1-202ENST00000562747 C16orf92Q96LL3 132 aa12.12□□□□□ -0.47
CDT1-202ENST00000562747 C17orf77Q96MU5 243 aa12.12□□□□□ -0.47
CDT1-202ENST00000562747 LINC00052Q96N35 136 aa12.12□□□□□ -0.47
CDT1-202ENST00000562747 SLC39A9Q9NUM3 307 aa12.12□□□□□ -0.47
CDT1-202ENST00000562747 A0A087X0K7 114 aa12.11□□□□□ -0.47
CDT1-202ENST00000562747 H3BMM0 161 aa12.11□□□□□ -0.47
CDT1-202ENST00000562747 HLA-DRB4P13762 266 aa12.11□□□□□ -0.47
CDT1-202ENST00000562747 B2MP61769 119 aa12.11□□□□□ -0.47
CDT1-202ENST00000562747 C10orf113Q5VZT2 155 aa12.11□□□□□ -0.47
CDT1-202ENST00000562747 FOXI2Q6ZQN5 318 aa12.11□□□□□ -0.47
CDT1-202ENST00000562747 OR11H7Q8NGC8 314 aa12.11□□□□□ -0.47
CDT1-202ENST00000562747 IL17DQ8TAD2 202 aa12.11□□□□□ -0.47
CDT1-202ENST00000562747 PFDN5Q99471 154 aa12.11□□□□□ -0.47
CDT1-202ENST00000562747 NPCDR1Q9BY65 106 aa12.11□□□□□ -0.47
CDT1-202ENST00000562747 SAV1Q9H4B6 383 aaPredicted RBP12.11□□□□□ -0.47
CDT1-202ENST00000562747 DNAJC4Q9NNZ3 241 aa12.11□□□□□ -0.47
CDT1-202ENST00000562747 MBD2Q9UBB5 411 aa12.11□□□□□ -0.47
CDT1-202ENST00000562747 HSPB11Q9Y547 144 aa12.11□□□□□ -0.47
CDT1-202ENST00000562747 HLA-DRB4X5D2U9 266 aa12.11□□□□□ -0.47
CDT1-202ENST00000562747 RPL12P30050 165 aaKnown RBP12.1□□□□□ -0.47
CDT1-202ENST00000562747 NUTF2P61970 127 aaKnown RBP12.1□□□□□ -0.47
CDT1-202ENST00000562747 CLINT1Q14677 625 aa12.1□□□□□ -0.47
CDT1-202ENST00000562747 OXA1LQ15070 435 aa12.1□□□□□ -0.47
CDT1-202ENST00000562747 FCN2Q15485 313 aa12.1□□□□□ -0.47
CDT1-202ENST00000562747 SPATA31B1PQ5VZV4 182 aa12.1□□□□□ -0.47
CDT1-202ENST00000562747 ASB13Q8WXK3 278 aa12.1□□□□□ -0.47
CDT1-202ENST00000562747 RPRMQ9NS64 109 aa12.1□□□□□ -0.47
CDT1-202ENST00000562747 PXMP4Q9Y6I8 212 aa12.1□□□□□ -0.47
CDT1-202ENST00000562747 AGRNO00468 2067 aa12.1□□□□□ -0.47
CDT1-202ENST00000562747 MRPS12O15235 138 aaKnown RBP12.09□□□□□ -0.47
CDT1-202ENST00000562747 FGL1Q08830 312 aa12.09□□□□□ -0.47
CDT1-202ENST00000562747 BPIFA4PQ86YQ2 179 aa12.09□□□□□ -0.47
CDT1-202ENST00000562747 THAP6Q8TBB0 222 aa12.09□□□□□ -0.47
CDT1-202ENST00000562747 CLUHP3Q96NS8 147 aa12.09□□□□□ -0.47
CDT1-202ENST00000562747 WDR61Q9GZS3 305 aaKnown RBP12.09□□□□□ -0.47
CDT1-202ENST00000562747 GIG44P09565 113 aaPredicted RBP12.08□□□□□ -0.48
CDT1-202ENST00000562747 CXCL2P19875 107 aa12.08□□□□□ -0.48
CDT1-202ENST00000562747 C4BPBP20851 252 aa12.08□□□□□ -0.48
CDT1-202ENST00000562747 GDF5OSQ5U4N7 250 aa12.08□□□□□ -0.48
CDT1-202ENST00000562747 EBLN2Q6P2I7 272 aa12.08□□□□□ -0.48
CDT1-202ENST00000562747 LINC00476Q8WZB0 136 aa12.08□□□□□ -0.48
CDT1-202ENST00000562747 C20orf173Q96LM9 149 aa12.08□□□□□ -0.48
CDT1-202ENST00000562747 ATP5SQ99766 215 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms