RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 MT-ND4LP03901 98 aa13.22□□□□□ -0.29
HDDC3-206ENST00000561036 ADIRFQ15847 76 aa13.22□□□□□ -0.29
HDDC3-206ENST00000561036 C1orf194Q5T5A4 169 aa13.22□□□□□ -0.29
HDDC3-206ENST00000561036 RNF152Q8N8N0 203 aa13.22□□□□□ -0.29
HDDC3-206ENST00000561036 C5orf17Q8NAS9 161 aa13.22□□□□□ -0.29
HDDC3-206ENST00000561036 OR4X2Q8NGF9 303 aa13.22□□□□□ -0.29
HDDC3-206ENST00000561036 METTL26Q96S19 204 aa13.22□□□□□ -0.29
HDDC3-206ENST00000561036 DERL1Q9BUN8 251 aa13.22□□□□□ -0.29
HDDC3-206ENST00000561036 PGPA6NDG6 321 aa13.21□□□□□ -0.29
HDDC3-206ENST00000561036 PPP5D1E7EU14 171 aa13.21□□□□□ -0.29
HDDC3-206ENST00000561036 S100A9P06702 114 aaKnown RBP13.21□□□□□ -0.29
HDDC3-206ENST00000561036 AKR1C3P42330 323 aa13.21□□□□□ -0.29
HDDC3-206ENST00000561036 RPL35P42766 123 aaKnown RBP13.21□□□□□ -0.29
HDDC3-206ENST00000561036 TAS2R60P59551 318 aa13.21□□□□□ -0.29
HDDC3-206ENST00000561036 LINC01551Q86U37 167 aa13.21□□□□□ -0.29
HDDC3-206ENST00000561036 Q9H3A6 140 aa13.21□□□□□ -0.29
HDDC3-206ENST00000561036 EPDR1Q9UM22 224 aa13.21□□□□□ -0.29
HDDC3-206ENST00000561036 U3KQE9 123 aa13.21□□□□□ -0.29
HDDC3-206ENST00000561036 CLPSL1A2RUU4 121 aa13.2□□□□□ -0.3
HDDC3-206ENST00000561036 DNAJC9-AS1A6NH13 148 aa13.2□□□□□ -0.3
HDDC3-206ENST00000561036 PEX7O00628 323 aa13.2□□□□□ -0.3
HDDC3-206ENST00000561036 GGCTO75223 188 aaKnown RBP13.2□□□□□ -0.3
HDDC3-206ENST00000561036 SLC25A5P05141 298 aaKnown RBP13.2□□□□□ -0.3
HDDC3-206ENST00000561036 CD99P14209 185 aa13.2□□□□□ -0.3
HDDC3-206ENST00000561036 RPL15P61313 204 aaKnown RBP13.2□□□□□ -0.3
HDDC3-206ENST00000561036 OR8I2Q8N0Y5 310 aa13.2□□□□□ -0.3
HDDC3-206ENST00000561036 C15orf54Q8N8G6 183 aa13.2□□□□□ -0.3
HDDC3-206ENST00000561036 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.2□□□□□ -0.3
HDDC3-206ENST00000561036 MYOZ3Q8TDC0 251 aa13.2□□□□□ -0.3
HDDC3-206ENST00000561036 CDC42EP3Q9UKI2 254 aa13.2□□□□□ -0.3
HDDC3-206ENST00000561036 NBPF19A0A087WUL8 3843 aa13.19□□□□□ -0.3
HDDC3-206ENST00000561036 IGHV3-35A0A0C4DH35 117 aa13.19□□□□□ -0.3
HDDC3-206ENST00000561036 BUB3O43684 328 aa13.19□□□□□ -0.3
HDDC3-206ENST00000561036 ZNF253O75346 499 aa13.19□□□□□ -0.3
HDDC3-206ENST00000561036 GNG4P50150 75 aa13.19□□□□□ -0.3
HDDC3-206ENST00000561036 CNN1P51911 297 aaKnown RBP13.19□□□□□ -0.3
HDDC3-206ENST00000561036 ANAPC16Q96DE5 110 aa13.19□□□□□ -0.3
HDDC3-206ENST00000561036 PEF1Q9UBV8 284 aaKnown RBP13.19□□□□□ -0.3
HDDC3-206ENST00000561036 CCDC168Q8NDH2 2452 aa13.19□□□□□ -0.3
HDDC3-206ENST00000561036 ZANQ9Y493 2812 aa13.19□□□□□ -0.3
HDDC3-206ENST00000561036 TRBV20OR9-2A0A075B6H5 130 aa13.18□□□□□ -0.3
HDDC3-206ENST00000561036 IGHV3-11P01762 117 aa13.18□□□□□ -0.3
HDDC3-206ENST00000561036 PSG9Q00887 426 aa13.18□□□□□ -0.3
HDDC3-206ENST00000561036 RNF212Q495C1 297 aa13.18□□□□□ -0.3
HDDC3-206ENST00000561036 ARL6IP6Q8N6S5 226 aa13.18□□□□□ -0.3
HDDC3-206ENST00000561036 ISOC2Q96AB3 205 aa13.18□□□□□ -0.3
HDDC3-206ENST00000561036 ATG101Q9BSB4 218 aa13.18□□□□□ -0.3
HDDC3-206ENST00000561036 SERTAD4Q9NUC0 356 aa13.18□□□□□ -0.3
HDDC3-206ENST00000561036 KLF12Q9Y4X4 402 aa13.18□□□□□ -0.3
HDDC3-206ENST00000561036 TEX15Q9BXT5 2789 aa13.17□□□□□ -0.3
HDDC3-206ENST00000561036 A0A087X0K7 114 aa13.17□□□□□ -0.3
HDDC3-206ENST00000561036 PPP1R2P9O14990 202 aa13.17□□□□□ -0.3
HDDC3-206ENST00000561036 ATF4P18848 351 aaPredicted RBP13.17□□□□□ -0.3
HDDC3-206ENST00000561036 MEOX2P50222 304 aa13.17□□□□□ -0.3
HDDC3-206ENST00000561036 CENPWQ5EE01 88 aa13.17□□□□□ -0.3
HDDC3-206ENST00000561036 SIGLEC15Q6ZMC9 328 aa13.17□□□□□ -0.3
HDDC3-206ENST00000561036 OCC1Q8TAD7 63 aa13.17□□□□□ -0.3
HDDC3-206ENST00000561036 DUX5Q96PT3 197 aa13.17□□□□□ -0.3
HDDC3-206ENST00000561036 ITPR2Q14571 2701 aa13.17□□□□□ -0.3
HDDC3-206ENST00000561036 COLCA2A8K830 154 aa13.16□□□□□ -0.3
HDDC3-206ENST00000561036 TRBV12-3P01733 135 aa13.16□□□□□ -0.3
HDDC3-206ENST00000561036 SNRPCP09234 159 aaKnown RBP13.16□□□□□ -0.3
HDDC3-206ENST00000561036 FOSL1P15407 271 aa13.16□□□□□ -0.3
HDDC3-206ENST00000561036 SRD5A1P18405 259 aa13.16□□□□□ -0.3
HDDC3-206ENST00000561036 GALR1P47211 349 aa13.16□□□□□ -0.3
HDDC3-206ENST00000561036 TMEM183BQ1AE95 376 aa13.16□□□□□ -0.3
HDDC3-206ENST00000561036 LCNL1Q6ZST4 164 aa13.16□□□□□ -0.3
HDDC3-206ENST00000561036 CMTM2Q8TAZ6 248 aa13.16□□□□□ -0.3
HDDC3-206ENST00000561036 ZNF418Q8TF45 676 aaPredicted RBP13.16□□□□□ -0.3
HDDC3-206ENST00000561036 SMIM12Q96EX1 92 aa13.16□□□□□ -0.3
HDDC3-206ENST00000561036 UBE2E2Q96LR5 201 aa13.16□□□□□ -0.3
HDDC3-206ENST00000561036 IGF2BP2-AS1Q96M15 143 aa13.16□□□□□ -0.3
HDDC3-206ENST00000561036 CELSR1Q9NYQ6 3014 aa13.16□□□□□ -0.3
HDDC3-206ENST00000561036 SVEP1Q4LDE5 3571 aa13.15□□□□□ -0.3
HDDC3-206ENST00000561036 FAM181BA6NEQ2 426 aa13.15□□□□□ -0.3
HDDC3-206ENST00000561036 H3BTX0 84 aa13.15□□□□□ -0.3
HDDC3-206ENST00000561036 LY6G6DO95868 133 aa13.15□□□□□ -0.3
HDDC3-206ENST00000561036 TCRAP04437 139 aa13.15□□□□□ -0.3
HDDC3-206ENST00000561036 RPLP1P05386 114 aaKnown RBP13.15□□□□□ -0.3
HDDC3-206ENST00000561036 RNASE1P07998 156 aaKnown RBP13.15□□□□□ -0.3
HDDC3-206ENST00000561036 GPHB5Q86YW7 130 aa13.15□□□□□ -0.3
HDDC3-206ENST00000561036 FMC1Q96HJ9 113 aa13.15□□□□□ -0.3
HDDC3-206ENST00000561036 C17orf77Q96MU5 243 aa13.15□□□□□ -0.3
HDDC3-206ENST00000561036 YPEL4Q96NS1 127 aa13.15□□□□□ -0.3
HDDC3-206ENST00000561036 AAMDCQ9H7C9 122 aa13.15□□□□□ -0.3
HDDC3-206ENST00000561036 SMAD5-AS1Q9Y6J3 95 aa13.15□□□□□ -0.3
HDDC3-206ENST00000561036 FLNAP21333 2647 aaKnown RBP13.14□□□□□ -0.31
HDDC3-206ENST00000561036 IGHV3OR16-8A0A075B7F1 116 aa13.14□□□□□ -0.31
HDDC3-206ENST00000561036 TRBV6-1A0A0K0K1D8 114 aa13.14□□□□□ -0.31
HDDC3-206ENST00000561036 SERTM2A0A1B0GWG4 89 aa13.14□□□□□ -0.31
HDDC3-206ENST00000561036 H7BYZ3 331 aa13.14□□□□□ -0.31
HDDC3-206ENST00000561036 K7EMT4 169 aa13.14□□□□□ -0.31
HDDC3-206ENST00000561036 LGALS1P09382 135 aaKnown RBP13.14□□□□□ -0.31
HDDC3-206ENST00000561036 FAM106AQ4KMX7 169 aa13.14□□□□□ -0.31
HDDC3-206ENST00000561036 C16orf54Q6UWD8 224 aa13.14□□□□□ -0.31
HDDC3-206ENST00000561036 C10orf99Q6UWK7 81 aa13.14□□□□□ -0.31
HDDC3-206ENST00000561036 Q6ZSV7 163 aa13.14□□□□□ -0.31
HDDC3-206ENST00000561036 EXOC3-AS1Q8N2X6 119 aa13.14□□□□□ -0.31
HDDC3-206ENST00000561036 SFRP2Q96HF1 295 aa13.14□□□□□ -0.31
HDDC3-206ENST00000561036 GRAMD2BQ96HH9 432 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms