RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 C9orf170A2RU37 121 aa11.08□□□□□ -0.64
TPM1-211ENST00000558314 PRSS46E5RG02 174 aa11.08□□□□□ -0.64
TPM1-211ENST00000558314 M0R2Z0 102 aa11.08□□□□□ -0.64
TPM1-211ENST00000558314 PRM2P04554 102 aa11.08□□□□□ -0.64
TPM1-211ENST00000558314 OR5G3P0C626 314 aa11.08□□□□□ -0.64
TPM1-211ENST00000558314 S100A7P31151 101 aa11.08□□□□□ -0.64
TPM1-211ENST00000558314 PAX9P55771 341 aa11.08□□□□□ -0.64
TPM1-211ENST00000558314 RAP2BP61225 183 aa11.08□□□□□ -0.64
TPM1-211ENST00000558314 DAD1P61803 113 aa11.08□□□□□ -0.64
TPM1-211ENST00000558314 SPINK13Q1W4C9 94 aa11.08□□□□□ -0.64
TPM1-211ENST00000558314 SPANXN2Q5MJ10 180 aa11.08□□□□□ -0.64
TPM1-211ENST00000558314 CYP2G1PQ6ZSU1 146 aa11.08□□□□□ -0.64
TPM1-211ENST00000558314 ZNF738Q8NE65 137 aa11.08□□□□□ -0.64
TPM1-211ENST00000558314 LRRC20Q8TCA0 184 aa11.08□□□□□ -0.64
TPM1-211ENST00000558314 KRTAP17-1Q9BYP8 105 aa11.08□□□□□ -0.64
TPM1-211ENST00000558314 PPP1R14DQ9NXH3 145 aa11.08□□□□□ -0.64
TPM1-211ENST00000558314 ZNF705GA8MUZ8 300 aaPredicted RBP11.07□□□□□ -0.64
TPM1-211ENST00000558314 CNN1P51911 297 aaKnown RBP11.07□□□□□ -0.64
TPM1-211ENST00000558314 RHOBP62745 196 aa11.07□□□□□ -0.64
TPM1-211ENST00000558314 LINC00336Q6ZUF6 198 aa11.07□□□□□ -0.64
TPM1-211ENST00000558314 CCDC190Q86UF4 302 aa11.07□□□□□ -0.64
TPM1-211ENST00000558314 HIGD1AQ9Y241 93 aa11.07□□□□□ -0.64
TPM1-211ENST00000558314 PRSS29PA6NIE9 313 aa11.06□□□□□ -0.64
TPM1-211ENST00000558314 CCNKO75909 580 aa11.06□□□□□ -0.64
TPM1-211ENST00000558314 DUSP14O95147 198 aaKnown RBP11.06□□□□□ -0.64
TPM1-211ENST00000558314 C4orf46Q504U0 113 aa11.06□□□□□ -0.64
TPM1-211ENST00000558314 BAP18Q8IXM2 172 aa11.06□□□□□ -0.64
TPM1-211ENST00000558314 IGF2BP2-AS1Q96M15 143 aa11.06□□□□□ -0.64
TPM1-211ENST00000558314 C17orf77Q96MU5 243 aa11.06□□□□□ -0.64
TPM1-211ENST00000558314 CLUHP3Q96NS8 147 aa11.06□□□□□ -0.64
TPM1-211ENST00000558314 GPR82Q96P67 336 aa11.06□□□□□ -0.64
TPM1-211ENST00000558314 UHRF2Q96PU4 802 aa11.06□□□□□ -0.64
TPM1-211ENST00000558314 SLC25A39Q9BZJ4 359 aaPredicted RBP11.06□□□□□ -0.64
TPM1-211ENST00000558314 RBM38Q9H0Z9 239 aaKnown RBP11.06□□□□□ -0.64
TPM1-211ENST00000558314 SLC45A2Q9UMX9 530 aa11.06□□□□□ -0.64
TPM1-211ENST00000558314 TRAV12-2A0A075B6T6 113 aa11.05□□□□□ -0.64
TPM1-211ENST00000558314 TRAV8-2A0A0B4J237 113 aa11.05□□□□□ -0.64
TPM1-211ENST00000558314 H3BRN7 92 aa11.05□□□□□ -0.64
TPM1-211ENST00000558314 HYPMO75409 117 aa11.05□□□□□ -0.64
TPM1-211ENST00000558314 INSP01308 110 aa11.05□□□□□ -0.64
TPM1-211ENST00000558314 SNRPCP09234 159 aaKnown RBP11.05□□□□□ -0.64
TPM1-211ENST00000558314 METTL15P1P0C7V9 234 aa11.05□□□□□ -0.64
TPM1-211ENST00000558314 LINC00869P0C866 280 aa11.05□□□□□ -0.64
TPM1-211ENST00000558314 HTN1P15515 57 aa11.05□□□□□ -0.64
TPM1-211ENST00000558314 ANXA7P20073 488 aaKnown RBP11.05□□□□□ -0.64
TPM1-211ENST00000558314 HIST1H1AQ02539 215 aaPredicted RBP11.05□□□□□ -0.64
TPM1-211ENST00000558314 TMEM88Q6PEY1 159 aa11.05□□□□□ -0.64
TPM1-211ENST00000558314 TMEM144Q7Z5S9 345 aa11.05□□□□□ -0.64
TPM1-211ENST00000558314 OR11H7Q8NGC8 314 aa11.05□□□□□ -0.64
TPM1-211ENST00000558314 SRRQ9GZT4 340 aa11.05□□□□□ -0.64
TPM1-211ENST00000558314 GSKIPQ9P0R6 139 aa11.05□□□□□ -0.64
TPM1-211ENST00000558314 HERC2O95714 4834 aa11.04□□□□□ -0.64
TPM1-211ENST00000558314 NDUFB6O95139 128 aa11.04□□□□□ -0.64
TPM1-211ENST00000558314 OR4E1P0C645 316 aa11.04□□□□□ -0.64
TPM1-211ENST00000558314 DEFB130BP0DP73 79 aa11.04□□□□□ -0.64
TPM1-211ENST00000558314 DEFB130AP0DP74 79 aa11.04□□□□□ -0.64
TPM1-211ENST00000558314 UBE2MP61081 183 aaKnown RBP11.04□□□□□ -0.64
TPM1-211ENST00000558314 ID3Q02535 119 aa11.04□□□□□ -0.64
TPM1-211ENST00000558314 BAK1Q16611 211 aa11.04□□□□□ -0.64
TPM1-211ENST00000558314 AMTNQ6UX39 209 aa11.04□□□□□ -0.64
TPM1-211ENST00000558314 OR4D5Q8NGN0 318 aa11.04□□□□□ -0.64
TPM1-211ENST00000558314 DEDD2Q8WXF8 326 aa11.04□□□□□ -0.64
TPM1-211ENST00000558314 SHANK2-AS3Q9BTD1 123 aa11.04□□□□□ -0.64
TPM1-211ENST00000558314 ARL6Q9H0F7 186 aa11.04□□□□□ -0.64
TPM1-211ENST00000558314 MGAT4CQ9UBM8 478 aa11.04□□□□□ -0.64
TPM1-211ENST00000558314 DNAH6Q9C0G6 4158 aa11.03□□□□□ -0.64
TPM1-211ENST00000558314 NAP1L6A6NFF2 107 aa11.03□□□□□ -0.64
TPM1-211ENST00000558314 RPL7P18124 248 aaKnown RBP11.03□□□□□ -0.64
TPM1-211ENST00000558314 SLC38A11Q08AI6 406 aa11.03□□□□□ -0.64
TPM1-211ENST00000558314 IAH1Q2TAA2 248 aaPredicted RBP11.03□□□□□ -0.64
TPM1-211ENST00000558314 CENPXA8MT69 81 aa11.02□□□□□ -0.65
TPM1-211ENST00000558314 RTL8CO15255 209 aa11.02□□□□□ -0.65
TPM1-211ENST00000558314 FCN2Q15485 313 aa11.02□□□□□ -0.65
TPM1-211ENST00000558314 OR10P1Q8NGE3 313 aa11.02□□□□□ -0.65
TPM1-211ENST00000558314 SMIM8Q96KF7 97 aa11.02□□□□□ -0.65
TPM1-211ENST00000558314 FAM210BQ96KR6 192 aa11.02□□□□□ -0.65
TPM1-211ENST00000558314 LINC01587Q99440 93 aa11.02□□□□□ -0.65
TPM1-211ENST00000558314 HECTD4Q9Y4D8 3996 aa11.02□□□□□ -0.65
TPM1-211ENST00000558314 BOLA2-SMG1P6H3BVE0 249 aa11.01□□□□□ -0.65
TPM1-211ENST00000558314 SELENOTP62341 195 aa11.01□□□□□ -0.65
TPM1-211ENST00000558314 DLK1P80370 383 aa11.01□□□□□ -0.65
TPM1-211ENST00000558314 ATG101Q9BSB4 218 aa11.01□□□□□ -0.65
TPM1-211ENST00000558314 NPVFQ9HCQ7 196 aa11.01□□□□□ -0.65
TPM1-211ENST00000558314 PMS2P5A8MQ11 134 aa11□□□□□ -0.65
TPM1-211ENST00000558314 FAM25EA8MYX2 175 aa11□□□□□ -0.65
TPM1-211ENST00000558314 F5H768 121 aa11□□□□□ -0.65
TPM1-211ENST00000558314 H3BTX0 84 aa11□□□□□ -0.65
TPM1-211ENST00000558314 CCSO14618 274 aa11□□□□□ -0.65
TPM1-211ENST00000558314 GOSR2O14653 212 aa11□□□□□ -0.65
TPM1-211ENST00000558314 CRXO43186 299 aaPredicted RBP11□□□□□ -0.65
TPM1-211ENST00000558314 NUDT3O95989 172 aa11□□□□□ -0.65
TPM1-211ENST00000558314 AZU1P20160 251 aa11□□□□□ -0.65
TPM1-211ENST00000558314 OXA1LQ15070 435 aa11□□□□□ -0.65
TPM1-211ENST00000558314 PSG3Q16557 428 aa11□□□□□ -0.65
TPM1-211ENST00000558314 LGALS9BQ3B8N2 356 aa11□□□□□ -0.65
TPM1-211ENST00000558314 TEPPQ6URK8 271 aa11□□□□□ -0.65
TPM1-211ENST00000558314 S100A7AQ86SG5 101 aa11□□□□□ -0.65
TPM1-211ENST00000558314 ZBTB8BQ8NAP8 495 aaPredicted RBP11□□□□□ -0.65
TPM1-211ENST00000558314 OR8A1Q8NGG7 326 aa11□□□□□ -0.65
TPM1-211ENST00000558314 ARV1Q9H2C2 271 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms