RNA–Protein interactions for RNA: ENST00000556778.5

PRKCH-222, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-222ENST00000556778 RPL12P30050 165 aaKnown RBP6.52□□□□□ -1.37
PRKCH-222ENST00000556778 DEFB131AP59861 70 aa6.52□□□□□ -1.37
PRKCH-222ENST00000556778 BAXQ07812 192 aa6.52□□□□□ -1.37
PRKCH-222ENST00000556778 LCE3BQ5TA77 95 aa6.52□□□□□ -1.37
PRKCH-222ENST00000556778 SIGLEC15Q6ZMC9 328 aa6.52□□□□□ -1.37
PRKCH-222ENST00000556778 PPP1R14BQ96C90 147 aa6.52□□□□□ -1.37
PRKCH-222ENST00000556778 GRAMD2BQ96HH9 432 aa6.52□□□□□ -1.37
PRKCH-222ENST00000556778 TMEM147Q9BVK8 224 aa6.52□□□□□ -1.37
PRKCH-222ENST00000556778 GGTLC1Q9BX51 225 aa6.52□□□□□ -1.37
PRKCH-222ENST00000556778 SLC25A39Q9BZJ4 359 aaPredicted RBP6.52□□□□□ -1.37
PRKCH-222ENST00000556778 SLC25A31Q9H0C2 315 aa6.52□□□□□ -1.37
PRKCH-222ENST00000556778 SLC25A32Q9H2D1 315 aa6.52□□□□□ -1.37
PRKCH-222ENST00000556778 KNCNA6PVL3 124 aa6.51□□□□□ -1.37
PRKCH-222ENST00000556778 H3BTX0 84 aa6.51□□□□□ -1.37
PRKCH-222ENST00000556778 EIF3GO75821 320 aaKnown RBP eCLIP6.51□□□□□ -1.37
PRKCH-222ENST00000556778 PAFAH1B2P68402 229 aa6.51□□□□□ -1.37
PRKCH-222ENST00000556778 ATP6V1FQ16864 119 aa6.51□□□□□ -1.37
PRKCH-222ENST00000556778 OR8I2Q8N0Y5 310 aa6.51□□□□□ -1.37
PRKCH-222ENST00000556778 NARS2Q96I59 477 aaKnown RBP6.51□□□□□ -1.37
PRKCH-222ENST00000556778 SHANK2-AS3Q9BTD1 123 aa6.51□□□□□ -1.37
PRKCH-222ENST00000556778 RSG1Q9BU20 258 aa6.51□□□□□ -1.37
PRKCH-222ENST00000556778 ARV1Q9H2C2 271 aa6.51□□□□□ -1.37
PRKCH-222ENST00000556778 TMEM231Q9H6L2 316 aa6.51□□□□□ -1.37
PRKCH-222ENST00000556778 HIGD1AQ9Y241 93 aa6.51□□□□□ -1.37
PRKCH-222ENST00000556778 HSPB11Q9Y547 144 aa6.51□□□□□ -1.37
PRKCH-222ENST00000556778 HELTA6NFD8 242 aa6.5□□□□□ -1.37
PRKCH-222ENST00000556778 H3BRN7 92 aa6.5□□□□□ -1.37
PRKCH-222ENST00000556778 SOCS3O14543 225 aa6.5□□□□□ -1.37
PRKCH-222ENST00000556778 CFDP00746 253 aaPredicted RBP6.5□□□□□ -1.37
PRKCH-222ENST00000556778 GIPP09681 153 aaPredicted RBP6.5□□□□□ -1.37
PRKCH-222ENST00000556778 BMI1P35226 326 aa6.5□□□□□ -1.37
PRKCH-222ENST00000556778 PLP1P60201 277 aa6.5□□□□□ -1.37
PRKCH-222ENST00000556778 SELENOTP62341 195 aa6.5□□□□□ -1.37
PRKCH-222ENST00000556778 HBG1P69891 147 aa6.5□□□□□ -1.37
PRKCH-222ENST00000556778 HBG2P69892 147 aa6.5□□□□□ -1.37
PRKCH-222ENST00000556778 OPCMLQ14982 345 aa6.5□□□□□ -1.37
PRKCH-222ENST00000556778 PSMG4Q5JS54 123 aa6.5□□□□□ -1.37
PRKCH-222ENST00000556778 SPATA31B1PQ5VZV4 182 aa6.5□□□□□ -1.37
PRKCH-222ENST00000556778 LINC00305Q7Z4B0 112 aa6.5□□□□□ -1.37
PRKCH-222ENST00000556778 ZNF546Q86UE3 836 aa6.5□□□□□ -1.37
PRKCH-222ENST00000556778 OR2T35Q8NGX2 323 aa6.5□□□□□ -1.37
PRKCH-222ENST00000556778 C20orf173Q96LM9 149 aa6.5□□□□□ -1.37
PRKCH-222ENST00000556778 FAM110AQ9BQ89 295 aa6.5□□□□□ -1.37
PRKCH-222ENST00000556778 NPCDR1Q9BY65 106 aa6.5□□□□□ -1.37
PRKCH-222ENST00000556778 WDR61Q9GZS3 305 aaKnown RBP6.5□□□□□ -1.37
PRKCH-222ENST00000556778 NRN1Q9NPD7 142 aa6.5□□□□□ -1.37
PRKCH-222ENST00000556778 SLC39A9Q9NUM3 307 aa6.5□□□□□ -1.37
PRKCH-222ENST00000556778 PXMP4Q9Y6I8 212 aa6.5□□□□□ -1.37
PRKCH-222ENST00000556778 TRAV8-2A0A0B4J237 113 aa6.49□□□□□ -1.37
PRKCH-222ENST00000556778 MRPS12O15235 138 aaKnown RBP6.49□□□□□ -1.37
PRKCH-222ENST00000556778 COX7A2P2O60397 106 aa6.49□□□□□ -1.37
PRKCH-222ENST00000556778 CD5P06127 495 aa6.49□□□□□ -1.37
PRKCH-222ENST00000556778 HLA-DMBP28068 263 aa6.49□□□□□ -1.37
PRKCH-222ENST00000556778 RPL29P47914 159 aaKnown RBP6.49□□□□□ -1.37
PRKCH-222ENST00000556778 AP2S1P53680 142 aaPredicted RBP6.49□□□□□ -1.37
PRKCH-222ENST00000556778 RAP2BP61225 183 aa6.49□□□□□ -1.37
PRKCH-222ENST00000556778 C1orf194Q5T5A4 169 aa6.49□□□□□ -1.37
PRKCH-222ENST00000556778 GDF5OSQ5U4N7 250 aa6.49□□□□□ -1.37
PRKCH-222ENST00000556778 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.49□□□□□ -1.37
PRKCH-222ENST00000556778 LINC00052Q96N35 136 aa6.49□□□□□ -1.37
PRKCH-222ENST00000556778 ATP5SQ99766 215 aa6.49□□□□□ -1.37
PRKCH-222ENST00000556778 TM2D3Q9BRN9 247 aa6.49□□□□□ -1.37
PRKCH-222ENST00000556778 DNAJC4Q9NNZ3 241 aa6.49□□□□□ -1.37
PRKCH-222ENST00000556778 COL7A1Q02388 2944 aa6.48□□□□□ -1.37
PRKCH-222ENST00000556778 FXYD6-FXYD2A0A087WZ82 144 aa6.48□□□□□ -1.37
PRKCH-222ENST00000556778 LOC102724200A0A096LPH7 203 aaPredicted RBP6.48□□□□□ -1.37
PRKCH-222ENST00000556778 TRAV2A0A0B4J234 112 aa6.48□□□□□ -1.37
PRKCH-222ENST00000556778 RNF222A6NCQ9 220 aa6.48□□□□□ -1.37
PRKCH-222ENST00000556778 F6UB75 175 aa6.48□□□□□ -1.37
PRKCH-222ENST00000556778 H3BQ15 152 aa6.48□□□□□ -1.37
PRKCH-222ENST00000556778 ZNF705DP0CH99 300 aaPredicted RBP6.48□□□□□ -1.37
PRKCH-222ENST00000556778 ZNF705BP0CI00 300 aaPredicted RBP6.48□□□□□ -1.37
PRKCH-222ENST00000556778 PET100P0DJ07 73 aa6.48□□□□□ -1.37
PRKCH-222ENST00000556778 B2MP61769 119 aa6.48□□□□□ -1.37
PRKCH-222ENST00000556778 FGL1Q08830 312 aa6.48□□□□□ -1.37
PRKCH-222ENST00000556778 RAB31Q13636 194 aa6.48□□□□□ -1.37
PRKCH-222ENST00000556778 ACTL10Q5JWF8 245 aa6.48□□□□□ -1.37
PRKCH-222ENST00000556778 C10orf113Q5VZT2 155 aa6.48□□□□□ -1.37
PRKCH-222ENST00000556778 Q6ZNX1 250 aa6.48□□□□□ -1.37
PRKCH-222ENST00000556778 Q6ZRG5 221 aa6.48□□□□□ -1.37
PRKCH-222ENST00000556778 RNF182Q8N6D2 247 aa6.48□□□□□ -1.37
PRKCH-222ENST00000556778 OR11H4Q8NGC9 324 aa6.48□□□□□ -1.37
PRKCH-222ENST00000556778 SEPSECSQ9HD40 501 aaKnown RBP6.48□□□□□ -1.37
PRKCH-222ENST00000556778 FBXL17Q9UF56 701 aa6.48□□□□□ -1.37
PRKCH-222ENST00000556778 A0A1B0GVG6 124 aa6.47□□□□□ -1.37
PRKCH-222ENST00000556778 IGKV3-20P01619 116 aa6.47□□□□□ -1.37
PRKCH-222ENST00000556778 GIG44P09565 113 aaPredicted RBP6.47□□□□□ -1.37
PRKCH-222ENST00000556778 NHLRC4P0CG21 123 aaPredicted RBP6.47□□□□□ -1.37
PRKCH-222ENST00000556778 MIR17HGQ75NE6 70 aa6.47□□□□□ -1.37
PRKCH-222ENST00000556778 RCHY1Q96PM5 261 aa6.47□□□□□ -1.37
PRKCH-222ENST00000556778 AQP10Q96PS8 301 aa6.47□□□□□ -1.37
PRKCH-222ENST00000556778 PFDN2Q9UHV9 154 aa6.47□□□□□ -1.37
PRKCH-222ENST00000556778 TNFSF18Q9UNG2 199 aa6.47□□□□□ -1.37
PRKCH-222ENST00000556778 U3KQK5 164 aa6.47□□□□□ -1.37
PRKCH-222ENST00000556778 SLC17A3O00476 420 aa6.46□□□□□ -1.38
PRKCH-222ENST00000556778 ARPC5O15511 151 aa6.46□□□□□ -1.38
PRKCH-222ENST00000556778 PYYP10082 97 aa6.46□□□□□ -1.38
PRKCH-222ENST00000556778 GALR1P47211 349 aa6.46□□□□□ -1.38
PRKCH-222ENST00000556778 CMC4P56277 68 aaPredicted RBP6.46□□□□□ -1.38
PRKCH-222ENST00000556778 PXDC1Q5TGL8 231 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms