RNA–Protein interactions for RNA: ENST00000555955.3

SIX1-205, Transcript of SIX homeobox 1, humanhuman

TSL 2

Gene SIX1, Length 2,844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-205ENST00000555955 ZNF826PQ6ZT77 177 aa11.69□□□□□ -0.54
SIX1-205ENST00000555955 DEFB119Q8N690 84 aa11.69□□□□□ -0.54
SIX1-205ENST00000555955 SRSF12Q8WXF0 261 aaKnown RBP11.69□□□□□ -0.54
SIX1-205ENST00000555955 ZNF714Q96N38 554 aa11.69□□□□□ -0.54
SIX1-205ENST00000555955 FAM186AA6NE01 2351 aa11.69□□□□□ -0.54
SIX1-205ENST00000555955 SDK1Q7Z5N4 2213 aa11.69□□□□□ -0.54
SIX1-205ENST00000555955 LINC01548A6NM66 108 aa11.68□□□□□ -0.54
SIX1-205ENST00000555955 PRTN3P24158 256 aa11.68□□□□□ -0.54
SIX1-205ENST00000555955 CD69Q07108 199 aa11.68□□□□□ -0.54
SIX1-205ENST00000555955 EDDM3AQ14507 147 aa11.68□□□□□ -0.54
SIX1-205ENST00000555955 OR1L4Q8NGR5 311 aa11.68□□□□□ -0.54
SIX1-205ENST00000555955 PCSK5Q92824 1860 aa11.68□□□□□ -0.54
SIX1-205ENST00000555955 C15orf65H3BRN8 121 aa11.68□□□□□ -0.54
SIX1-205ENST00000555955 DLL1O00548 723 aa11.68□□□□□ -0.54
SIX1-205ENST00000555955 GTSCR1Q86UQ5 136 aa11.68□□□□□ -0.54
SIX1-205ENST00000555955 RPS19BP1Q86WX3 136 aaKnown RBP11.68□□□□□ -0.54
SIX1-205ENST00000555955 YAE1D1Q9NRH1 226 aa11.68□□□□□ -0.54
SIX1-205ENST00000555955 METRNQ9UJH8 293 aa11.68□□□□□ -0.54
SIX1-205ENST00000555955 TRAV8-1A0A0A6YYK1 113 aa11.68□□□□□ -0.54
SIX1-205ENST00000555955 WI2-2373I1.2A0A1W2PRP0 233 aa11.68□□□□□ -0.54
SIX1-205ENST00000555955 GAGE12JA6NER3 117 aa11.68□□□□□ -0.54
SIX1-205ENST00000555955 GAGE7O76087 117 aa11.68□□□□□ -0.54
SIX1-205ENST00000555955 GAGE12FP0CL80 117 aa11.68□□□□□ -0.54
SIX1-205ENST00000555955 GAGE12GP0CL81 117 aa11.68□□□□□ -0.54
SIX1-205ENST00000555955 GAGE12IP0CL82 117 aa11.68□□□□□ -0.54
SIX1-205ENST00000555955 ZNF134P52741 427 aa11.68□□□□□ -0.54
SIX1-205ENST00000555955 GAGE4Q13068 117 aa11.68□□□□□ -0.54
SIX1-205ENST00000555955 LINC00305Q7Z4B0 112 aa11.68□□□□□ -0.54
SIX1-205ENST00000555955 FAM173AQ9BQD7 235 aa11.68□□□□□ -0.54
SIX1-205ENST00000555955 C10orf142B7Z368 130 aa11.67□□□□□ -0.54
SIX1-205ENST00000555955 KIR2DS2P43631 304 aa11.67□□□□□ -0.54
SIX1-205ENST00000555955 DIAPH2-AS1Q14236 149 aa11.67□□□□□ -0.54
SIX1-205ENST00000555955 PSMG4Q5JS54 123 aa11.67□□□□□ -0.54
SIX1-205ENST00000555955 FLYWCH2Q96CP2 140 aaKnown RBP11.67□□□□□ -0.54
SIX1-205ENST00000555955 LMO7DNF2Z398 122 aa11.67□□□□□ -0.54
SIX1-205ENST00000555955 H3BTX0 84 aa11.67□□□□□ -0.54
SIX1-205ENST00000555955 SCRG1O75711 98 aa11.67□□□□□ -0.54
SIX1-205ENST00000555955 RBP4P02753 201 aa11.67□□□□□ -0.54
SIX1-205ENST00000555955 TCRAP04437 139 aa11.67□□□□□ -0.54
SIX1-205ENST00000555955 PRCDQ00LT1 54 aa11.67□□□□□ -0.54
SIX1-205ENST00000555955 C2orf83Q53S99 150 aa11.67□□□□□ -0.54
SIX1-205ENST00000555955 C1orf229Q6ZS94 237 aaPredicted RBP11.67□□□□□ -0.54
SIX1-205ENST00000555955 DEFB123Q8N688 67 aa11.67□□□□□ -0.54
SIX1-205ENST00000555955 PRB4P10163 310 aaPredicted RBP11.66□□□□□ -0.54
SIX1-205ENST00000555955 RND1Q92730 232 aa11.66□□□□□ -0.54
SIX1-205ENST00000555955 RAX2Q96IS3 184 aa11.66□□□□□ -0.54
SIX1-205ENST00000555955 HIST1H4GQ99525 98 aa11.66□□□□□ -0.54
SIX1-205ENST00000555955 SSR4P51571 173 aa11.66□□□□□ -0.54
SIX1-205ENST00000555955 ALKBH6Q3KRA9 238 aa11.66□□□□□ -0.54
SIX1-205ENST00000555955 KLF17Q5JT82 389 aaPredicted RBP11.66□□□□□ -0.54
SIX1-205ENST00000555955 Q6ZS92 163 aa11.66□□□□□ -0.54
SIX1-205ENST00000555955 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.66□□□□□ -0.54
SIX1-205ENST00000555955 FSTL3O95633 263 aa11.65□□□□□ -0.54
SIX1-205ENST00000555955 IGHV3-48P01763 117 aa11.65□□□□□ -0.54
SIX1-205ENST00000555955 RFPL3SP0C7P2 107 aa11.65□□□□□ -0.54
SIX1-205ENST00000555955 RNASE2P10153 161 aaKnown RBP11.65□□□□□ -0.54
SIX1-205ENST00000555955 MRPS21P82921 87 aaKnown RBP11.65□□□□□ -0.54
SIX1-205ENST00000555955 PPDPFLQ8WWR9 84 aa11.65□□□□□ -0.54
SIX1-205ENST00000555955 SPTBN5Q9NRC6 3674 aaKnown RBP11.65□□□□□ -0.54
SIX1-205ENST00000555955 TRIOBPQ9H2D6 2365 aa11.65□□□□□ -0.54
SIX1-205ENST00000555955 PAX8Q06710 450 aa11.65□□□□□ -0.54
SIX1-205ENST00000555955 ZC2HC1BQ5TFG8 222 aa11.65□□□□□ -0.54
SIX1-205ENST00000555955 Q71RC1 249 aaPredicted RBP11.65□□□□□ -0.54
SIX1-205ENST00000555955 MOGAT3Q86VF5 341 aa11.65□□□□□ -0.54
SIX1-205ENST00000555955 ORMDL3Q8N138 153 aa11.65□□□□□ -0.54
SIX1-205ENST00000555955 RBMXL3Q8N7X1 1067 aaKnown RBP11.65□□□□□ -0.54
SIX1-205ENST00000555955 CARD19Q96LW7 228 aa11.65□□□□□ -0.54
SIX1-205ENST00000555955 PPDPFQ9H3Y8 114 aa11.65□□□□□ -0.54
SIX1-205ENST00000555955 TMSB15BA0A087X1C1 80 aa11.64□□□□□ -0.55
SIX1-205ENST00000555955 PRSS1P07477 247 aa11.64□□□□□ -0.55
SIX1-205ENST00000555955 TAL2Q16559 108 aa11.64□□□□□ -0.55
SIX1-205ENST00000555955 ABHD17BQ5VST6 288 aa11.64□□□□□ -0.55
SIX1-205ENST00000555955 PRNTQ86SH4 94 aa11.64□□□□□ -0.55
SIX1-205ENST00000555955 FAM90A1Q86YD7 464 aa11.64□□□□□ -0.55
SIX1-205ENST00000555955 GATD1Q8NB37 220 aa11.64□□□□□ -0.55
SIX1-205ENST00000555955 C8orf46Q8TAG6 207 aa11.64□□□□□ -0.55
SIX1-205ENST00000555955 DLX4Q92988 240 aaPredicted RBP11.64□□□□□ -0.55
SIX1-205ENST00000555955 FABP5P3A8MUU1 101 aa11.64□□□□□ -0.55
SIX1-205ENST00000555955 IGKCP01834 107 aa11.64□□□□□ -0.55
SIX1-205ENST00000555955 ORM2P19652 201 aa11.64□□□□□ -0.55
SIX1-205ENST00000555955 MPV17P39210 176 aa11.64□□□□□ -0.55
SIX1-205ENST00000555955 TUSC5Q8IXB3 177 aa11.64□□□□□ -0.55
SIX1-205ENST00000555955 AMN1Q8IY45 258 aa11.64□□□□□ -0.55
SIX1-205ENST00000555955 C3orf56Q8N813 242 aa11.64□□□□□ -0.55
SIX1-205ENST00000555955 RITA1Q96K30 269 aa11.64□□□□□ -0.55
SIX1-205ENST00000555955 M0QXV9 152 aa11.64□□□□□ -0.55
SIX1-205ENST00000555955 Q86TA4 180 aa11.64□□□□□ -0.55
SIX1-205ENST00000555955 MAPKAPK5-AS1Q8N8E1 139 aa11.64□□□□□ -0.55
SIX1-205ENST00000555955 LEAP2Q969E1 77 aa11.64□□□□□ -0.55
SIX1-205ENST00000555955 ZMAT4Q9H898 229 aa11.64□□□□□ -0.55
SIX1-205ENST00000555955 SHISA9B4DS77 424 aa11.63□□□□□ -0.55
SIX1-205ENST00000555955 MEOX1P50221 254 aa11.63□□□□□ -0.55
SIX1-205ENST00000555955 PCOLCEQ15113 449 aa11.63□□□□□ -0.55
SIX1-205ENST00000555955 C1orf210Q8IVY1 113 aa11.63□□□□□ -0.55
SIX1-205ENST00000555955 OR1L8Q8NGR8 309 aa11.63□□□□□ -0.55
SIX1-205ENST00000555955 NPIPB3Q92617 1050 aa11.63□□□□□ -0.55
SIX1-205ENST00000555955 Q9H3A6 140 aa11.63□□□□□ -0.55
SIX1-205ENST00000555955 VCX2Q9H322 139 aa11.63□□□□□ -0.55
SIX1-205ENST00000555955 MRPS17Q9Y2R5 130 aaKnown RBP11.63□□□□□ -0.55
SIX1-205ENST00000555955 EVI2AP22794 236 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms