RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 SLC25A32Q9H2D1 315 aa8.92□□□□□ -0.98
SRP54-206ENST00000555317 ALG5Q9Y673 324 aa8.92□□□□□ -0.98
SRP54-206ENST00000555317 H3BRN7 92 aa8.91□□□□□ -0.98
SRP54-206ENST00000555317 ISLRO14498 428 aa8.91□□□□□ -0.98
SRP54-206ENST00000555317 SPP1P10451 314 aa8.91□□□□□ -0.98
SRP54-206ENST00000555317 FGF7P21781 194 aa8.91□□□□□ -0.98
SRP54-206ENST00000555317 NUTF2P61970 127 aaKnown RBP8.91□□□□□ -0.98
SRP54-206ENST00000555317 FGL1Q08830 312 aa8.91□□□□□ -0.98
SRP54-206ENST00000555317 TMEM41BQ5BJD5 291 aa8.91□□□□□ -0.98
SRP54-206ENST00000555317 MORN3Q6PF18 240 aaPredicted RBP8.91□□□□□ -0.98
SRP54-206ENST00000555317 IL17DQ8TAD2 202 aa8.91□□□□□ -0.98
SRP54-206ENST00000555317 GATAD1Q8WUU5 269 aa8.91□□□□□ -0.98
SRP54-206ENST00000555317 RNF183Q96D59 192 aa8.91□□□□□ -0.98
SRP54-206ENST00000555317 UHRF2Q96PU4 802 aa8.91□□□□□ -0.98
SRP54-206ENST00000555317 MED28Q9H204 178 aa8.91□□□□□ -0.98
SRP54-206ENST00000555317 ARV1Q9H2C2 271 aa8.91□□□□□ -0.98
SRP54-206ENST00000555317 EDA2RQ9HAV5 297 aa8.91□□□□□ -0.98
SRP54-206ENST00000555317 OR5AC2Q9NZP5 309 aa8.91□□□□□ -0.98
SRP54-206ENST00000555317 ELOA3CA0A087WX78 387 aaPredicted RBP8.9□□□□□ -0.98
SRP54-206ENST00000555317 MPDU1O75352 247 aa8.9□□□□□ -0.98
SRP54-206ENST00000555317 EWSR1Q01844 656 aaKnown RBP eCLIP8.9□□□□□ -0.98
SRP54-206ENST00000555317 CLINT1Q14677 625 aa8.9□□□□□ -0.98
SRP54-206ENST00000555317 RGS21Q2M5E4 152 aa8.9□□□□□ -0.98
SRP54-206ENST00000555317 VWC2Q2TAL6 325 aa8.9□□□□□ -0.98
SRP54-206ENST00000555317 C10orf113Q5VZT2 155 aa8.9□□□□□ -0.98
SRP54-206ENST00000555317 LINC00305Q7Z4B0 112 aa8.9□□□□□ -0.98
SRP54-206ENST00000555317 TRPT1Q86TN4 253 aaKnown RBP8.9□□□□□ -0.98
SRP54-206ENST00000555317 OR5C1Q8NGR4 320 aa8.9□□□□□ -0.98
SRP54-206ENST00000555317 OR1L4Q8NGR5 311 aa8.9□□□□□ -0.98
SRP54-206ENST00000555317 LRRC20Q8TCA0 184 aa8.9□□□□□ -0.98
SRP54-206ENST00000555317 PFDN5Q99471 154 aa8.9□□□□□ -0.98
SRP54-206ENST00000555317 WDR83OSQ9Y284 106 aa8.9□□□□□ -0.98
SRP54-206ENST00000555317 MPC2O95563 127 aa8.89□□□□□ -0.99
SRP54-206ENST00000555317 B2MP61769 119 aa8.89□□□□□ -0.99
SRP54-206ENST00000555317 MIC13Q5XKP0 118 aa8.89□□□□□ -0.99
SRP54-206ENST00000555317 EBLN2Q6P2I7 272 aa8.89□□□□□ -0.99
SRP54-206ENST00000555317 ZNF709Q8N972 641 aa8.89□□□□□ -0.99
SRP54-206ENST00000555317 RARRES2Q99969 163 aa8.89□□□□□ -0.99
SRP54-206ENST00000555317 KCNIP2Q9NS61 270 aa8.89□□□□□ -0.99
SRP54-206ENST00000555317 RPRMQ9NS64 109 aa8.89□□□□□ -0.99
SRP54-206ENST00000555317 TENM2Q9NT68 2774 aa8.89□□□□□ -0.99
SRP54-206ENST00000555317 H0YIZ8 118 aa8.88□□□□□ -0.99
SRP54-206ENST00000555317 SOCS3O14543 225 aa8.88□□□□□ -0.99
SRP54-206ENST00000555317 HLA-DRB4P13762 266 aa8.88□□□□□ -0.99
SRP54-206ENST00000555317 RPL29P47914 159 aaKnown RBP8.88□□□□□ -0.99
SRP54-206ENST00000555317 NHLH2Q02577 135 aa8.88□□□□□ -0.99
SRP54-206ENST00000555317 SPATA31B1PQ5VZV4 182 aa8.88□□□□□ -0.99
SRP54-206ENST00000555317 ZFAND6Q6FIF0 208 aa8.88□□□□□ -0.99
SRP54-206ENST00000555317 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.88□□□□□ -0.99
SRP54-206ENST00000555317 FOXI2Q6ZQN5 318 aa8.88□□□□□ -0.99
SRP54-206ENST00000555317 BPIFA4PQ86YQ2 179 aa8.88□□□□□ -0.99
SRP54-206ENST00000555317 THAP6Q8TBB0 222 aa8.88□□□□□ -0.99
SRP54-206ENST00000555317 C1QTNF4Q9BXJ3 329 aa8.88□□□□□ -0.99
SRP54-206ENST00000555317 DNAJC4Q9NNZ3 241 aa8.88□□□□□ -0.99
SRP54-206ENST00000555317 SLC39A9Q9NUM3 307 aa8.88□□□□□ -0.99
SRP54-206ENST00000555317 MBD2Q9UBB5 411 aa8.88□□□□□ -0.99
SRP54-206ENST00000555317 HLA-DRB4X5D2U9 266 aa8.88□□□□□ -0.99
SRP54-206ENST00000555317 A0A0J9YWU9 116 aa8.87□□□□□ -0.99
SRP54-206ENST00000555317 H3BMM0 161 aa8.87□□□□□ -0.99
SRP54-206ENST00000555317 RPL12P30050 165 aaKnown RBP8.87□□□□□ -0.99
SRP54-206ENST00000555317 OPCMLQ14982 345 aa8.87□□□□□ -0.99
SRP54-206ENST00000555317 PATE2Q6UY27 113 aa8.87□□□□□ -0.99
SRP54-206ENST00000555317 OR4B1Q8NGF8 309 aa8.87□□□□□ -0.99
SRP54-206ENST00000555317 OR11H2Q8NH07 326 aa8.87□□□□□ -0.99
SRP54-206ENST00000555317 ATP5SQ99766 215 aa8.87□□□□□ -0.99
SRP54-206ENST00000555317 NPCDR1Q9BY65 106 aa8.87□□□□□ -0.99
SRP54-206ENST00000555317 SAV1Q9H4B6 383 aaPredicted RBP8.87□□□□□ -0.99
SRP54-206ENST00000555317 PXMP4Q9Y6I8 212 aa8.87□□□□□ -0.99
SRP54-206ENST00000555317 C17orf112F2Z3M2 114 aa8.86□□□□□ -0.99
SRP54-206ENST00000555317 IFNA5P01569 189 aa8.86□□□□□ -0.99
SRP54-206ENST00000555317 IGKV3-20P01619 116 aa8.86□□□□□ -0.99
SRP54-206ENST00000555317 PRR20EP86478 221 aa8.86□□□□□ -0.99
SRP54-206ENST00000555317 PRR20CP86479 221 aa8.86□□□□□ -0.99
SRP54-206ENST00000555317 PRR20DP86480 221 aa8.86□□□□□ -0.99
SRP54-206ENST00000555317 PRR20BP86481 221 aa8.86□□□□□ -0.99
SRP54-206ENST00000555317 PRR20AP86496 221 aa8.86□□□□□ -0.99
SRP54-206ENST00000555317 CASC10Q5T4H9 136 aa8.86□□□□□ -0.99
SRP54-206ENST00000555317 LCN15Q6UWW0 184 aa8.86□□□□□ -0.99
SRP54-206ENST00000555317 ZNF738Q8NE65 137 aa8.86□□□□□ -0.99
SRP54-206ENST00000555317 SCGB1C1Q8TD33 95 aa8.86□□□□□ -0.99
SRP54-206ENST00000555317 CHAC2Q8WUX2 184 aa8.86□□□□□ -0.99
SRP54-206ENST00000555317 TMEM37Q8WXS4 190 aa8.86□□□□□ -0.99
SRP54-206ENST00000555317 HSPB11Q9Y547 144 aa8.86□□□□□ -0.99
SRP54-206ENST00000555317 A0A087X0K7 114 aa8.85□□□□□ -0.99
SRP54-206ENST00000555317 CXCL2P19875 107 aa8.85□□□□□ -0.99
SRP54-206ENST00000555317 CXCL3P19876 107 aa8.85□□□□□ -0.99
SRP54-206ENST00000555317 C4BPBP20851 252 aa8.85□□□□□ -0.99
SRP54-206ENST00000555317 FCN2Q15485 313 aa8.85□□□□□ -0.99
SRP54-206ENST00000555317 ASB13Q8WXK3 278 aa8.85□□□□□ -0.99
SRP54-206ENST00000555317 RNF126Q9BV68 326 aa8.85□□□□□ -0.99
SRP54-206ENST00000555317 SMIM3Q9BZL3 60 aa8.85□□□□□ -0.99
SRP54-206ENST00000555317 CLEC5AQ9NY25 188 aa8.85□□□□□ -0.99
SRP54-206ENST00000555317 XCL2Q9UBD3 114 aa8.85□□□□□ -0.99
SRP54-206ENST00000555317 CSMD3Q7Z407 3707 aa8.84□□□□□ -0.99
SRP54-206ENST00000555317 A0A0J9YX75 114 aa8.84□□□□□ -0.99
SRP54-206ENST00000555317 CXorf65A6NEN9 183 aa8.84□□□□□ -0.99
SRP54-206ENST00000555317 DUSP14O95147 198 aaKnown RBP8.84□□□□□ -0.99
SRP54-206ENST00000555317 DEFB1P60022 68 aa8.84□□□□□ -0.99
SRP54-206ENST00000555317 PSG9Q00887 426 aa8.84□□□□□ -0.99
SRP54-206ENST00000555317 GDF5OSQ5U4N7 250 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms