RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 LINC01619G3V211 115 aa8.19□□□□□ -1.1
TDP1-211ENST00000555178 PRB4P10163 310 aaPredicted RBP8.19□□□□□ -1.1
TDP1-211ENST00000555178 GP9P14770 177 aa8.19□□□□□ -1.1
TDP1-211ENST00000555178 GCHFRP30047 84 aa8.19□□□□□ -1.1
TDP1-211ENST00000555178 KLF5Q13887 457 aaPredicted RBP8.19□□□□□ -1.1
TDP1-211ENST00000555178 HAGHQ16775 308 aa8.19□□□□□ -1.1
TDP1-211ENST00000555178 NDUFA11Q86Y39 141 aa8.19□□□□□ -1.1
TDP1-211ENST00000555178 C3orf56Q8N813 242 aa8.19□□□□□ -1.1
TDP1-211ENST00000555178 TRAV1-1A0A0B4J248 108 aa8.18□□□□□ -1.1
TDP1-211ENST00000555178 CXorf1O96002 111 aa8.18□□□□□ -1.1
TDP1-211ENST00000555178 KHDC3LQ587J8 217 aa8.18□□□□□ -1.1
TDP1-211ENST00000555178 TOR2AQ5JU69 321 aa8.18□□□□□ -1.1
TDP1-211ENST00000555178 C12orf54Q6X4T0 127 aa8.18□□□□□ -1.1
TDP1-211ENST00000555178 IL34Q6ZMJ4 242 aa8.18□□□□□ -1.1
TDP1-211ENST00000555178 GPHB5Q86YW7 130 aa8.18□□□□□ -1.1
TDP1-211ENST00000555178 METTL26Q96S19 204 aa8.18□□□□□ -1.1
TDP1-211ENST00000555178 TMEM213A2RRL7 107 aa8.18□□□□□ -1.1
TDP1-211ENST00000555178 H3BQ15 152 aa8.18□□□□□ -1.1
TDP1-211ENST00000555178 BUB3O43684 328 aa8.18□□□□□ -1.1
TDP1-211ENST00000555178 CRYBB3P26998 211 aa8.18□□□□□ -1.1
TDP1-211ENST00000555178 UBE2L3P68036 154 aaKnown RBP8.18□□□□□ -1.1
TDP1-211ENST00000555178 BLNKQ8WV28 456 aa8.18□□□□□ -1.1
TDP1-211ENST00000555178 DPF1Q92782 380 aa8.18□□□□□ -1.1
TDP1-211ENST00000555178 FXYD5Q96DB9 178 aa8.18□□□□□ -1.1
TDP1-211ENST00000555178 C17orf77Q96MU5 243 aa8.18□□□□□ -1.1
TDP1-211ENST00000555178 RNF2Q99496 336 aa8.18□□□□□ -1.1
TDP1-211ENST00000555178 PAXXQ9BUH6 204 aa8.18□□□□□ -1.1
TDP1-211ENST00000555178 C9JQL5 133 aa8.17□□□□□ -1.1
TDP1-211ENST00000555178 MRPS12O15235 138 aaKnown RBP8.17□□□□□ -1.1
TDP1-211ENST00000555178 HBE1P02100 147 aa8.17□□□□□ -1.1
TDP1-211ENST00000555178 NPPCP23582 126 aa8.17□□□□□ -1.1
TDP1-211ENST00000555178 TAS2R45P59539 299 aa8.17□□□□□ -1.1
TDP1-211ENST00000555178 FAM106AQ4KMX7 169 aa8.17□□□□□ -1.1
TDP1-211ENST00000555178 CITED4Q96RK1 184 aa8.17□□□□□ -1.1
TDP1-211ENST00000555178 OR51M1Q9H341 326 aa8.17□□□□□ -1.1
TDP1-211ENST00000555178 DAZ1Q9NQZ3 744 aaKnown RBP8.17□□□□□ -1.1
TDP1-211ENST00000555178 PFDN2Q9UHV9 154 aa8.17□□□□□ -1.1
TDP1-211ENST00000555178 YTHDF2Q9Y5A9 579 aaKnown RBP8.17□□□□□ -1.1
TDP1-211ENST00000555178 U3KQE9 123 aa8.17□□□□□ -1.1
TDP1-211ENST00000555178 MARC2Q969Z3 335 aa8.17□□□□□ -1.1
TDP1-211ENST00000555178 FAM210AQ96ND0 272 aa8.17□□□□□ -1.1
TDP1-211ENST00000555178 ZNF586Q9NXT0 402 aa8.17□□□□□ -1.1
TDP1-211ENST00000555178 SMAD5-AS1Q9Y6J3 95 aa8.17□□□□□ -1.1
TDP1-211ENST00000555178 SLC17A3O00476 420 aa8.16□□□□□ -1.1
TDP1-211ENST00000555178 PAGE4O60829 102 aa8.16□□□□□ -1.1
TDP1-211ENST00000555178 ZP3P21754 424 aa8.16□□□□□ -1.1
TDP1-211ENST00000555178 ATP5G3P48201 142 aa8.16□□□□□ -1.1
TDP1-211ENST00000555178 GUK1Q16774 197 aa8.16□□□□□ -1.1
TDP1-211ENST00000555178 PQLC2Q6ZP29 291 aa8.16□□□□□ -1.1
TDP1-211ENST00000555178 OR8I2Q8N0Y5 310 aa8.16□□□□□ -1.1
TDP1-211ENST00000555178 IGHV7-4-1A0A0J9YVY3 117 aa8.15□□□□□ -1.1
TDP1-211ENST00000555178 IGLC2P0DOY2 106 aa8.15□□□□□ -1.1
TDP1-211ENST00000555178 BCL2P10415 239 aa8.15□□□□□ -1.1
TDP1-211ENST00000555178 ICAM4Q14773 271 aa8.15□□□□□ -1.1
TDP1-211ENST00000555178 REC114Q7Z4M0 266 aa8.15□□□□□ -1.1
TDP1-211ENST00000555178 C1QL4Q86Z23 238 aa8.15□□□□□ -1.1
TDP1-211ENST00000555178 LINC00482Q8N8I6 264 aa8.15□□□□□ -1.1
TDP1-211ENST00000555178 RXFP4Q8TDU9 374 aa8.15□□□□□ -1.1
TDP1-211ENST00000555178 RHPN1-AS1Q9BWJ2 59 aa8.15□□□□□ -1.1
TDP1-211ENST00000555178 EIF5A2Q9GZV4 153 aaKnown RBP8.15□□□□□ -1.1
TDP1-211ENST00000555178 IGKV3-7A0A075B6H7 116 aa8.15□□□□□ -1.1
TDP1-211ENST00000555178 LOC102723971A0A1B0GUV8 181 aa8.15□□□□□ -1.1
TDP1-211ENST00000555178 RBFOX3A6NFN3 312 aa8.15□□□□□ -1.1
TDP1-211ENST00000555178 A8MWP6 167 aa8.15□□□□□ -1.1
TDP1-211ENST00000555178 CHEK1O14757 476 aa8.15□□□□□ -1.1
TDP1-211ENST00000555178 IGFL4Q6B9Z1 124 aa8.15□□□□□ -1.1
TDP1-211ENST00000555178 BPIFA4PQ86YQ2 179 aa8.15□□□□□ -1.1
TDP1-211ENST00000555178 GLMPQ8WWB7 406 aa8.15□□□□□ -1.1
TDP1-211ENST00000555178 MED9Q9NWA0 146 aa8.15□□□□□ -1.1
TDP1-211ENST00000555178 DNHD1Q96M86 4753 aa8.15□□□□□ -1.11
TDP1-211ENST00000555178 C2orf70A6NJV1 201 aa8.14□□□□□ -1.11
TDP1-211ENST00000555178 FAM74A7A6NL05 159 aa8.14□□□□□ -1.11
TDP1-211ENST00000555178 GGTLC3B5MD39 225 aa8.14□□□□□ -1.11
TDP1-211ENST00000555178 C16orf54Q6UWD8 224 aa8.14□□□□□ -1.11
TDP1-211ENST00000555178 OR9G4Q8NGQ1 327 aa8.14□□□□□ -1.11
TDP1-211ENST00000555178 ELOVL1Q9BW60 279 aa8.14□□□□□ -1.11
TDP1-211ENST00000555178 SMPXQ9UHP9 88 aa8.14□□□□□ -1.11
TDP1-211ENST00000555178 UFC1Q9Y3C8 167 aa8.14□□□□□ -1.11
TDP1-211ENST00000555178 LGALS9O00182 355 aa8.14□□□□□ -1.11
TDP1-211ENST00000555178 NDUFB4O95168 129 aa8.14□□□□□ -1.11
TDP1-211ENST00000555178 CSN3P07498 182 aa8.14□□□□□ -1.11
TDP1-211ENST00000555178 NBEAP1P0C6P0 100 aa8.14□□□□□ -1.11
TDP1-211ENST00000555178 PSMB3P49720 205 aa8.14□□□□□ -1.11
TDP1-211ENST00000555178 CD81P60033 236 aa8.14□□□□□ -1.11
TDP1-211ENST00000555178 RANP62826 216 aaKnown RBP8.14□□□□□ -1.11
TDP1-211ENST00000555178 CST9LP1Q5W188 147 aa8.14□□□□□ -1.11
TDP1-211ENST00000555178 SUN5Q8TC36 379 aa8.14□□□□□ -1.11
TDP1-211ENST00000555178 TMEM14CQ9P0S9 112 aa8.14□□□□□ -1.11
TDP1-211ENST00000555178 MLXQ9UH92 298 aa8.14□□□□□ -1.11
TDP1-211ENST00000555178 K7EMT4 169 aa8.13□□□□□ -1.11
TDP1-211ENST00000555178 FOLR2P14207 255 aa8.13□□□□□ -1.11
TDP1-211ENST00000555178 CBLN1P23435 193 aa8.13□□□□□ -1.11
TDP1-211ENST00000555178 HLA-DMBP28068 263 aa8.13□□□□□ -1.11
TDP1-211ENST00000555178 MYCNOSP40205 109 aa8.13□□□□□ -1.11
TDP1-211ENST00000555178 ZNF506Q5JVG8 444 aa8.13□□□□□ -1.11
TDP1-211ENST00000555178 SIGLEC15Q6ZMC9 328 aa8.13□□□□□ -1.11
TDP1-211ENST00000555178 EXOC3-AS1Q8N2X6 119 aa8.13□□□□□ -1.11
TDP1-211ENST00000555178 TMEM167BQ9NRX6 74 aa8.13□□□□□ -1.11
TDP1-211ENST00000555178 TRBV19A0A075B6N1 114 aa8.13□□□□□ -1.11
TDP1-211ENST00000555178 IZUMO1RA6ND01 250 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms