RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 AMBPP02760 352 aa6.93□□□□□ -1.3
TDP1-210ENST00000554976 PYYP10082 97 aa6.93□□□□□ -1.3
TDP1-210ENST00000554976 PPIFP30405 207 aaKnown RBP6.93□□□□□ -1.3
TDP1-210ENST00000554976 TAS2R45P59539 299 aa6.93□□□□□ -1.3
TDP1-210ENST00000554976 BCL6BQ8N143 479 aaPredicted RBP6.93□□□□□ -1.3
TDP1-210ENST00000554976 OR5AU1Q8NGC0 362 aa6.93□□□□□ -1.3
TDP1-210ENST00000554976 IGF2BP2-AS1Q96M15 143 aa6.93□□□□□ -1.3
TDP1-210ENST00000554976 CCDC140Q96MF4 163 aa6.93□□□□□ -1.3
TDP1-210ENST00000554976 EPG5Q9HCE0 2579 aa6.93□□□□□ -1.3
TDP1-210ENST00000554976 ZNF727A8MUV8 499 aa6.93□□□□□ -1.3
TDP1-210ENST00000554976 TRGC2P03986 189 aa6.93□□□□□ -1.3
TDP1-210ENST00000554976 CTSGP08311 255 aa6.93□□□□□ -1.3
TDP1-210ENST00000554976 CXCL1P09341 107 aa6.93□□□□□ -1.3
TDP1-210ENST00000554976 ADMP35318 185 aa6.93□□□□□ -1.3
TDP1-210ENST00000554976 IQCJQ1A5X6 159 aa6.93□□□□□ -1.3
TDP1-210ENST00000554976 C16orf82Q7Z2V1 217 aa6.93□□□□□ -1.3
TDP1-210ENST00000554976 ZNF329Q86UD4 541 aa6.93□□□□□ -1.3
TDP1-210ENST00000554976 MAPK1IP1LQ8NDC0 245 aa6.93□□□□□ -1.3
TDP1-210ENST00000554976 SMIM7Q9BQ49 75 aa6.93□□□□□ -1.3
TDP1-210ENST00000554976 ZNF705GA8MUZ8 300 aaPredicted RBP6.93□□□□□ -1.3
TDP1-210ENST00000554976 G3V318 75 aa6.93□□□□□ -1.3
TDP1-210ENST00000554976 OR10J4P0C629 311 aa6.93□□□□□ -1.3
TDP1-210ENST00000554976 LINC01551Q86U37 167 aa6.93□□□□□ -1.3
TDP1-210ENST00000554976 FRZBQ92765 325 aa6.93□□□□□ -1.3
TDP1-210ENST00000554976 RPUSD4Q96CM3 377 aaKnown RBP6.93□□□□□ -1.3
TDP1-210ENST00000554976 C17orf77Q96MU5 243 aa6.93□□□□□ -1.3
TDP1-210ENST00000554976 SHANK2-AS3Q9BTD1 123 aa6.93□□□□□ -1.3
TDP1-210ENST00000554976 SLC25A39Q9BZJ4 359 aaPredicted RBP6.93□□□□□ -1.3
TDP1-210ENST00000554976 MYO18BQ8IUG5 2567 aa6.92□□□□□ -1.3
TDP1-210ENST00000554976 TRAV30A0A087WSZ9 112 aa6.92□□□□□ -1.3
TDP1-210ENST00000554976 C20orf202A1L168 122 aa6.92□□□□□ -1.3
TDP1-210ENST00000554976 C9JCJ5 164 aa6.92□□□□□ -1.3
TDP1-210ENST00000554976 H3BUX3 64 aa6.92□□□□□ -1.3
TDP1-210ENST00000554976 NDUFB4O95168 129 aa6.92□□□□□ -1.3
TDP1-210ENST00000554976 IGLV2-8P01709 118 aa6.92□□□□□ -1.3
TDP1-210ENST00000554976 CEBPGP53567 150 aa6.92□□□□□ -1.3
TDP1-210ENST00000554976 PTTG1IPP53801 180 aa6.92□□□□□ -1.3
TDP1-210ENST00000554976 MFAP4P55083 255 aa6.92□□□□□ -1.3
TDP1-210ENST00000554976 OR5I1Q13606 314 aa6.92□□□□□ -1.3
TDP1-210ENST00000554976 TMEM241Q24JQ0 296 aa6.92□□□□□ -1.3
TDP1-210ENST00000554976 COA6Q5JTJ3 125 aaKnown RBP6.92□□□□□ -1.3
TDP1-210ENST00000554976 TEX38Q6PEX7 206 aa6.92□□□□□ -1.3
TDP1-210ENST00000554976 Q6ZS46 218 aa6.92□□□□□ -1.3
TDP1-210ENST00000554976 OR1B1Q8NGR6 318 aa6.92□□□□□ -1.3
TDP1-210ENST00000554976 Q96MF0 132 aa6.92□□□□□ -1.3
TDP1-210ENST00000554976 ELOVL1Q9BW60 279 aa6.92□□□□□ -1.3
TDP1-210ENST00000554976 ZFAND3Q9H8U3 227 aa6.92□□□□□ -1.3
TDP1-210ENST00000554976 LY96Q9Y6Y9 160 aa6.92□□□□□ -1.3
TDP1-210ENST00000554976 K7EN84 100 aa6.92□□□□□ -1.3
TDP1-210ENST00000554976 HYPMO75409 117 aa6.92□□□□□ -1.3
TDP1-210ENST00000554976 OR2J3O76001 311 aa6.92□□□□□ -1.3
TDP1-210ENST00000554976 IER3P46695 156 aa6.92□□□□□ -1.3
TDP1-210ENST00000554976 KRTAP1-1Q07627 177 aa6.92□□□□□ -1.3
TDP1-210ENST00000554976 DEFB112Q30KQ8 113 aa6.92□□□□□ -1.3
TDP1-210ENST00000554976 UNQ5815/PRO19632Q6UWF5 114 aa6.92□□□□□ -1.3
TDP1-210ENST00000554976 PAXXQ9BUH6 204 aa6.92□□□□□ -1.3
TDP1-210ENST00000554976 CSTL1Q9H114 145 aa6.92□□□□□ -1.3
TDP1-210ENST00000554976 C21orf62Q9NYP8 219 aa6.92□□□□□ -1.3
TDP1-210ENST00000554976 S4R3C0 116 aa6.92□□□□□ -1.3
TDP1-210ENST00000554976 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.92□□□□□ -1.32e-9■■■■■ 31.2
TDP1-210ENST00000554976 ANKRD17O75179 2603 aaKnown RBP6.92□□□□□ -1.3
TDP1-210ENST00000554976 CUBNO60494 3623 aa6.91□□□□□ -1.3
TDP1-210ENST00000554976 IGLC2P0DOY2 106 aa6.91□□□□□ -1.3
TDP1-210ENST00000554976 ORM2P19652 201 aa6.91□□□□□ -1.3
TDP1-210ENST00000554976 COL5A1-AS1Q5SY13 56 aa6.91□□□□□ -1.3
TDP1-210ENST00000554976 CST9LP1Q5W188 147 aa6.91□□□□□ -1.3
TDP1-210ENST00000554976 ATP6V0BQ99437 205 aa6.91□□□□□ -1.3
TDP1-210ENST00000554976 CHRDL1Q9BU40 450 aa6.91□□□□□ -1.3
TDP1-210ENST00000554976 FBXL7Q9UJT9 491 aa6.91□□□□□ -1.3
TDP1-210ENST00000554976 HIGD1AQ9Y241 93 aa6.91□□□□□ -1.3
TDP1-210ENST00000554976 OR7C2O60412 319 aa6.91□□□□□ -1.3
TDP1-210ENST00000554976 CTDSP1Q9GZU7 261 aa6.91□□□□□ -1.3
TDP1-210ENST00000554976 TRAV41A0A0B4J266 112 aa6.9□□□□□ -1.3
TDP1-210ENST00000554976 CLPSL1A2RUU4 121 aa6.9□□□□□ -1.3
TDP1-210ENST00000554976 IGLV1-40P01703 118 aa6.9□□□□□ -1.3
TDP1-210ENST00000554976 UBE2L3P68036 154 aaKnown RBP6.9□□□□□ -1.3
TDP1-210ENST00000554976 ECSCRQ19T08 205 aa6.9□□□□□ -1.3
TDP1-210ENST00000554976 Q6YL49 198 aa6.9□□□□□ -1.3
TDP1-210ENST00000554976 ORAOV1Q8WV07 137 aa6.9□□□□□ -1.3
TDP1-210ENST00000554976 RNF125Q96EQ8 232 aa6.9□□□□□ -1.3
TDP1-210ENST00000554976 NUDT11Q96G61 164 aa6.9□□□□□ -1.3
TDP1-210ENST00000554976 PYGO2Q9BRQ0 406 aa6.9□□□□□ -1.3
TDP1-210ENST00000554976 ZNF586Q9NXT0 402 aa6.9□□□□□ -1.3
TDP1-210ENST00000554976 H3BUA1 57 aa6.9□□□□□ -1.3
TDP1-210ENST00000554976 TGFAP01135 160 aa6.9□□□□□ -1.3
TDP1-210ENST00000554976 CD99P14209 185 aa6.9□□□□□ -1.3
TDP1-210ENST00000554976 CIARTQ8N365 385 aaPredicted RBP6.9□□□□□ -1.3
TDP1-210ENST00000554976 STXBP6Q8NFX7 210 aa6.9□□□□□ -1.3
TDP1-210ENST00000554976 AURKAIP1Q9NWT8 199 aaPredicted RBP6.9□□□□□ -1.3
TDP1-210ENST00000554976 THYN1Q9P016 225 aa6.9□□□□□ -1.3
TDP1-210ENST00000554976 CHD6Q8TD26 2715 aa6.9□□□□□ -1.31
TDP1-210ENST00000554976 PGPEP1LA6NFU8 196 aa6.9□□□□□ -1.31
TDP1-210ENST00000554976 PPP5D1E7EU14 171 aa6.9□□□□□ -1.31
TDP1-210ENST00000554976 CCL25O15444 150 aa6.9□□□□□ -1.31
TDP1-210ENST00000554976 IGHV3-23P01764 117 aa6.9□□□□□ -1.31
TDP1-210ENST00000554976 PFN1P07737 140 aaKnown RBP6.9□□□□□ -1.31
TDP1-210ENST00000554976 LYZP61626 148 aa6.9□□□□□ -1.31
TDP1-210ENST00000554976 RHOGP84095 191 aa6.9□□□□□ -1.31
TDP1-210ENST00000554976 C15orf32Q32M92 178 aa6.9□□□□□ -1.31
TDP1-210ENST00000554976 NECAP1Q8NC96 275 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms