RNA–Protein interactions for RNA: ENST00000554170.1

XRCC3-206, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-206ENST00000554170 COX7A2P2O60397 106 aa9.51□□□□□ -0.89
XRCC3-206ENST00000554170 GIPP09681 153 aaPredicted RBP9.51□□□□□ -0.89
XRCC3-206ENST00000554170 ID1P41134 155 aa9.51□□□□□ -0.89
XRCC3-206ENST00000554170 APOC4P55056 127 aa9.51□□□□□ -0.89
XRCC3-206ENST00000554170 SLC25A39Q9BZJ4 359 aaPredicted RBP9.51□□□□□ -0.89
XRCC3-206ENST00000554170 ARV1Q9H2C2 271 aa9.51□□□□□ -0.89
XRCC3-206ENST00000554170 SEPSECSQ9HD40 501 aaKnown RBP9.51□□□□□ -0.89
XRCC3-206ENST00000554170 ELOA3CA0A087WX78 387 aaPredicted RBP9.5□□□□□ -0.89
XRCC3-206ENST00000554170 H3BRN7 92 aa9.5□□□□□ -0.89
XRCC3-206ENST00000554170 ZNF688P0C7X2 276 aa9.5□□□□□ -0.89
XRCC3-206ENST00000554170 RPL29P47914 159 aaKnown RBP9.5□□□□□ -0.89
XRCC3-206ENST00000554170 MEOX2P50222 304 aa9.5□□□□□ -0.89
XRCC3-206ENST00000554170 CLINT1Q14677 625 aa9.5□□□□□ -0.89
XRCC3-206ENST00000554170 SAMD13Q5VXD3 122 aa9.5□□□□□ -0.89
XRCC3-206ENST00000554170 FAM24BQ8N5W8 94 aa9.5□□□□□ -0.89
XRCC3-206ENST00000554170 OR1L4Q8NGR5 311 aa9.5□□□□□ -0.89
XRCC3-206ENST00000554170 IL17DQ8TAD2 202 aa9.5□□□□□ -0.89
XRCC3-206ENST00000554170 CHAC2Q8WUX2 184 aa9.5□□□□□ -0.89
XRCC3-206ENST00000554170 SHANK2-AS3Q9BTD1 123 aa9.5□□□□□ -0.89
XRCC3-206ENST00000554170 SLC25A32Q9H2D1 315 aa9.5□□□□□ -0.89
XRCC3-206ENST00000554170 HSPB11Q9Y547 144 aa9.5□□□□□ -0.89
XRCC3-206ENST00000554170 IFNA5P01569 189 aa9.49□□□□□ -0.89
XRCC3-206ENST00000554170 RPL35AP18077 110 aaKnown RBP9.49□□□□□ -0.89
XRCC3-206ENST00000554170 RPL7P18124 248 aaKnown RBP9.49□□□□□ -0.89
XRCC3-206ENST00000554170 B2MP61769 119 aa9.49□□□□□ -0.89
XRCC3-206ENST00000554170 OPCMLQ14982 345 aa9.49□□□□□ -0.89
XRCC3-206ENST00000554170 PSMG4Q5JS54 123 aa9.49□□□□□ -0.89
XRCC3-206ENST00000554170 C10orf113Q5VZT2 155 aa9.49□□□□□ -0.89
XRCC3-206ENST00000554170 MIC13Q5XKP0 118 aa9.49□□□□□ -0.89
XRCC3-206ENST00000554170 LEMD1Q68G75 181 aa9.49□□□□□ -0.89
XRCC3-206ENST00000554170 PATE2Q6UY27 113 aa9.49□□□□□ -0.89
XRCC3-206ENST00000554170 LINC00305Q7Z4B0 112 aa9.49□□□□□ -0.89
XRCC3-206ENST00000554170 STHQ8IWL8 128 aa9.49□□□□□ -0.89
XRCC3-206ENST00000554170 ZNF709Q8N972 641 aa9.49□□□□□ -0.89
XRCC3-206ENST00000554170 PFDN5Q99471 154 aa9.49□□□□□ -0.89
XRCC3-206ENST00000554170 ATP5SQ99766 215 aa9.49□□□□□ -0.89
XRCC3-206ENST00000554170 RSG1Q9BU20 258 aa9.49□□□□□ -0.89
XRCC3-206ENST00000554170 SCRT1Q9BWW7 348 aa9.49□□□□□ -0.89
XRCC3-206ENST00000554170 DNAJC4Q9NNZ3 241 aa9.49□□□□□ -0.89
XRCC3-206ENST00000554170 ALMS1Q8TCU4 4167 aa9.49□□□□□ -0.89
XRCC3-206ENST00000554170 FRAS1Q86XX4 4008 aa9.48□□□□□ -0.89
XRCC3-206ENST00000554170 KIR2DL5BA0A0G2JN68 375 aa9.48□□□□□ -0.89
XRCC3-206ENST00000554170 KIR2DL5BA0A0G2JPC4 375 aa9.48□□□□□ -0.89
XRCC3-206ENST00000554170 C17orf112F2Z3M2 114 aa9.48□□□□□ -0.89
XRCC3-206ENST00000554170 UBE2CO00762 179 aa9.48□□□□□ -0.89
XRCC3-206ENST00000554170 ATF4P18848 351 aaPredicted RBP9.48□□□□□ -0.89
XRCC3-206ENST00000554170 PRR20EP86478 221 aa9.48□□□□□ -0.89
XRCC3-206ENST00000554170 PRR20CP86479 221 aa9.48□□□□□ -0.89
XRCC3-206ENST00000554170 PRR20DP86480 221 aa9.48□□□□□ -0.89
XRCC3-206ENST00000554170 PRR20BP86481 221 aa9.48□□□□□ -0.89
XRCC3-206ENST00000554170 PRR20AP86496 221 aa9.48□□□□□ -0.89
XRCC3-206ENST00000554170 ZNF124Q15973 351 aa9.48□□□□□ -0.89
XRCC3-206ENST00000554170 KIR2DL5AQ8N109 375 aa9.48□□□□□ -0.89
XRCC3-206ENST00000554170 KIR2DL5BQ8NHK3 375 aa9.48□□□□□ -0.89
XRCC3-206ENST00000554170 SCGB1C1Q8TD33 95 aa9.48□□□□□ -0.89
XRCC3-206ENST00000554170 C16orf92Q96LL3 132 aa9.48□□□□□ -0.89
XRCC3-206ENST00000554170 UHRF2Q96PU4 802 aa9.48□□□□□ -0.89
XRCC3-206ENST00000554170 NPCDR1Q9BY65 106 aa9.48□□□□□ -0.89
XRCC3-206ENST00000554170 WDR61Q9GZS3 305 aaKnown RBP9.48□□□□□ -0.89
XRCC3-206ENST00000554170 RETNQ9HD89 108 aa9.48□□□□□ -0.89
XRCC3-206ENST00000554170 KCNIP2Q9NS61 270 aa9.48□□□□□ -0.89
XRCC3-206ENST00000554170 SLC39A9Q9NUM3 307 aa9.48□□□□□ -0.89
XRCC3-206ENST00000554170 PXMP4Q9Y6I8 212 aa9.48□□□□□ -0.89
XRCC3-206ENST00000554170 PSMB3P49720 205 aa9.47□□□□□ -0.89
XRCC3-206ENST00000554170 LINC00052Q96N35 136 aa9.47□□□□□ -0.89
XRCC3-206ENST00000554170 SMIM3Q9BZL3 60 aa9.47□□□□□ -0.89
XRCC3-206ENST00000554170 ISLRO14498 428 aa9.46□□□□□ -0.9
XRCC3-206ENST00000554170 BPIFA4PQ86YQ2 179 aa9.46□□□□□ -0.9
XRCC3-206ENST00000554170 INO80EQ8NBZ0 244 aaPredicted RBP9.46□□□□□ -0.9
XRCC3-206ENST00000554170 OR2T35Q8NGX2 323 aa9.46□□□□□ -0.9
XRCC3-206ENST00000554170 LRRC20Q8TCA0 184 aa9.46□□□□□ -0.9
XRCC3-206ENST00000554170 GATAD1Q8WUU5 269 aa9.46□□□□□ -0.9
XRCC3-206ENST00000554170 TMEM37Q8WXS4 190 aa9.46□□□□□ -0.9
XRCC3-206ENST00000554170 CSTL1Q9H114 145 aa9.46□□□□□ -0.9
XRCC3-206ENST00000554170 KNCNA6PVL3 124 aa9.45□□□□□ -0.9
XRCC3-206ENST00000554170 ACTL10Q5JWF8 245 aa9.45□□□□□ -0.9
XRCC3-206ENST00000554170 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.45□□□□□ -0.9
XRCC3-206ENST00000554170 AQP10Q96PS8 301 aa9.45□□□□□ -0.9
XRCC3-206ENST00000554170 FXYD6-FXYD2A0A087WZ82 144 aa9.44□□□□□ -0.9
XRCC3-206ENST00000554170 SOCS3O14543 225 aa9.44□□□□□ -0.9
XRCC3-206ENST00000554170 Q5BKY6 102 aa9.44□□□□□ -0.9
XRCC3-206ENST00000554170 MORN3Q6PF18 240 aaPredicted RBP9.44□□□□□ -0.9
XRCC3-206ENST00000554170 Q6ZWC4 215 aa9.44□□□□□ -0.9
XRCC3-206ENST00000554170 PARD6GQ9BYG4 376 aaPredicted RBP9.44□□□□□ -0.9
XRCC3-206ENST00000554170 RPRMQ9NS64 109 aa9.44□□□□□ -0.9
XRCC3-206ENST00000554170 A0A087X0K7 114 aa9.43□□□□□ -0.9
XRCC3-206ENST00000554170 SPP1P10451 314 aa9.43□□□□□ -0.9
XRCC3-206ENST00000554170 NUTF2P61970 127 aaKnown RBP9.43□□□□□ -0.9
XRCC3-206ENST00000554170 ZNF266Q14584 549 aa9.43□□□□□ -0.9
XRCC3-206ENST00000554170 EBLN2Q6P2I7 272 aa9.43□□□□□ -0.9
XRCC3-206ENST00000554170 TRPT1Q86TN4 253 aaKnown RBP9.43□□□□□ -0.9
XRCC3-206ENST00000554170 LINC00476Q8WZB0 136 aa9.43□□□□□ -0.9
XRCC3-206ENST00000554170 TP53TG1Q9Y2A0 90 aa9.43□□□□□ -0.9
XRCC3-206ENST00000554170 TRAV5A0A0B4J249 113 aa9.42□□□□□ -0.9
XRCC3-206ENST00000554170 SPRY2O43597 315 aa9.42□□□□□ -0.9
XRCC3-206ENST00000554170 CA1P00915 261 aaPredicted RBP9.42□□□□□ -0.9
XRCC3-206ENST00000554170 CXCL2P19875 107 aa9.42□□□□□ -0.9
XRCC3-206ENST00000554170 DEFB135Q30KP9 77 aa9.42□□□□□ -0.9
XRCC3-206ENST00000554170 TMEM41BQ5BJD5 291 aa9.42□□□□□ -0.9
XRCC3-206ENST00000554170 FAM78BQ5VT40 261 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 254.5 ms