RNA–Protein interactions for RNA: ENST00000554131.5

PSEN1-210, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-210ENST00000554131 KANTRA0A1W2PQU2 76 aa13.78□□□□□ -0.2
PSEN1-210ENST00000554131 NKX2-5P52952 324 aaPredicted RBP13.78□□□□□ -0.2
PSEN1-210ENST00000554131 DCANP1Q8TF63 244 aa13.78□□□□□ -0.2
PSEN1-210ENST00000554131 GNPNAT1Q96EK6 184 aaPredicted RBP13.78□□□□□ -0.2
PSEN1-210ENST00000554131 AURKAIP1Q9NWT8 199 aaPredicted RBP13.78□□□□□ -0.2
PSEN1-210ENST00000554131 IGKV3-7A0A075B6H7 116 aa13.77□□□□□ -0.21
PSEN1-210ENST00000554131 TRAV2A0A0B4J234 112 aa13.77□□□□□ -0.21
PSEN1-210ENST00000554131 HELTA6NFD8 242 aa13.77□□□□□ -0.21
PSEN1-210ENST00000554131 PRB2P02812 416 aaPredicted RBP13.77□□□□□ -0.21
PSEN1-210ENST00000554131 SPP1P10451 314 aa13.77□□□□□ -0.21
PSEN1-210ENST00000554131 RAB2AP61019 212 aa13.77□□□□□ -0.21
PSEN1-210ENST00000554131 GUCA2BQ16661 112 aa13.77□□□□□ -0.21
PSEN1-210ENST00000554131 OR8I2Q8N0Y5 310 aa13.77□□□□□ -0.21
PSEN1-210ENST00000554131 Q8N1Y9 231 aa13.77□□□□□ -0.21
PSEN1-210ENST00000554131 FAM167A-AS1Q96KT0 104 aa13.77□□□□□ -0.21
PSEN1-210ENST00000554131 C19orf73Q9NVV2 129 aa13.77□□□□□ -0.21
PSEN1-210ENST00000554131 PLA2G2EQ9NZK7 142 aa13.77□□□□□ -0.21
PSEN1-210ENST00000554131 ZMAT5Q9UDW3 170 aaKnown RBP13.77□□□□□ -0.21
PSEN1-210ENST00000554131 K7EQG2 157 aa13.76□□□□□ -0.21
PSEN1-210ENST00000554131 SOCS3O14543 225 aa13.76□□□□□ -0.21
PSEN1-210ENST00000554131 CD7P09564 240 aa13.76□□□□□ -0.21
PSEN1-210ENST00000554131 M6PRP20645 277 aa13.76□□□□□ -0.21
PSEN1-210ENST00000554131 S100A7P31151 101 aa13.76□□□□□ -0.21
PSEN1-210ENST00000554131 SERF2P84101 59 aa13.76□□□□□ -0.21
PSEN1-210ENST00000554131 FAM78BQ5VT40 261 aa13.76□□□□□ -0.21
PSEN1-210ENST00000554131 MIR17HGQ75NE6 70 aa13.76□□□□□ -0.21
PSEN1-210ENST00000554131 S100A7AQ86SG5 101 aa13.76□□□□□ -0.21
PSEN1-210ENST00000554131 GBGT1Q8N5D6 347 aa13.76□□□□□ -0.21
PSEN1-210ENST00000554131 FAM24BQ8N5W8 94 aa13.76□□□□□ -0.21
PSEN1-210ENST00000554131 STOML3Q8TAV4 291 aa13.76□□□□□ -0.21
PSEN1-210ENST00000554131 GPR82Q96P67 336 aa13.76□□□□□ -0.21
PSEN1-210ENST00000554131 ZNF471Q9BX82 626 aaPredicted RBP13.76□□□□□ -0.21
PSEN1-210ENST00000554131 SORL1Q92673 2214 aa13.76□□□□□ -0.21
PSEN1-210ENST00000554131 PFDN1O60925 122 aa13.75□□□□□ -0.21
PSEN1-210ENST00000554131 SLC25A2Q9BXI2 301 aa13.75□□□□□ -0.21
PSEN1-210ENST00000554131 MRPL32Q9BYC8 188 aaKnown RBP13.75□□□□□ -0.21
PSEN1-210ENST00000554131 NRN1Q9NPD7 142 aa13.75□□□□□ -0.21
PSEN1-210ENST00000554131 FUT9Q9Y231 359 aa13.75□□□□□ -0.21
PSEN1-210ENST00000554131 A0A087X0K7 114 aa13.74□□□□□ -0.21
PSEN1-210ENST00000554131 RPL7P18124 248 aaKnown RBP13.74□□□□□ -0.21
PSEN1-210ENST00000554131 TFPI2P48307 235 aa13.74□□□□□ -0.21
PSEN1-210ENST00000554131 RPL11P62913 178 aaKnown RBP13.74□□□□□ -0.21
PSEN1-210ENST00000554131 ACOT6Q3I5F7 207 aaPredicted RBP13.74□□□□□ -0.21
PSEN1-210ENST00000554131 ODF3L2Q3SX64 289 aa13.74□□□□□ -0.21
PSEN1-210ENST00000554131 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.74□□□□□ -0.21
PSEN1-210ENST00000554131 RPP25LQ8N5L8 163 aaKnown RBP13.74□□□□□ -0.21
PSEN1-210ENST00000554131 STXBP6Q8NFX7 210 aa13.74□□□□□ -0.21
PSEN1-210ENST00000554131 FBN3Q75N90 2809 aa13.73□□□□□ -0.21
PSEN1-210ENST00000554131 OR4C46A6NHA9 309 aa13.73□□□□□ -0.21
PSEN1-210ENST00000554131 K7EIL1 84 aa13.73□□□□□ -0.21
PSEN1-210ENST00000554131 IGLC2P0DOY2 106 aa13.73□□□□□ -0.21
PSEN1-210ENST00000554131 GALR1P47211 349 aa13.73□□□□□ -0.21
PSEN1-210ENST00000554131 BAP18Q8IXM2 172 aa13.73□□□□□ -0.21
PSEN1-210ENST00000554131 ZNF503Q96F45 646 aa13.73□□□□□ -0.21
PSEN1-210ENST00000554131 RPRMQ9NS64 109 aa13.73□□□□□ -0.21
PSEN1-210ENST00000554131 TMEM14CQ9P0S9 112 aa13.73□□□□□ -0.21
PSEN1-210ENST00000554131 RNF24Q9Y225 148 aa13.73□□□□□ -0.21
PSEN1-210ENST00000554131 H3BQ15 152 aa13.72□□□□□ -0.21
PSEN1-210ENST00000554131 EIF3GO75821 320 aaKnown RBP eCLIP13.72□□□□□ -0.21
PSEN1-210ENST00000554131 SEC11BP0C7V7 166 aa13.72□□□□□ -0.21
PSEN1-210ENST00000554131 CD81P60033 236 aa13.72□□□□□ -0.21
PSEN1-210ENST00000554131 RHOBP62745 196 aa13.72□□□□□ -0.21
PSEN1-210ENST00000554131 PAFAH1B2P68402 229 aa13.72□□□□□ -0.21
PSEN1-210ENST00000554131 TMEM41BQ5BJD5 291 aa13.72□□□□□ -0.21
PSEN1-210ENST00000554131 BPIFA4PQ86YQ2 179 aa13.72□□□□□ -0.21
PSEN1-210ENST00000554131 WFDC3Q8IUB2 231 aa13.72□□□□□ -0.21
PSEN1-210ENST00000554131 OR10G4Q8NGN3 311 aa13.72□□□□□ -0.21
PSEN1-210ENST00000554131 OR10G9Q8NGN4 311 aa13.72□□□□□ -0.21
PSEN1-210ENST00000554131 OR10G7Q8NGN6 311 aa13.72□□□□□ -0.21
PSEN1-210ENST00000554131 FAM110AQ9BQ89 295 aa13.72□□□□□ -0.21
PSEN1-210ENST00000554131 BOLA2-SMG1P6H3BVE0 249 aa13.71□□□□□ -0.21
PSEN1-210ENST00000554131 DNASE2O00115 360 aaPredicted RBP13.71□□□□□ -0.21
PSEN1-210ENST00000554131 MBP02144 154 aa13.71□□□□□ -0.21
PSEN1-210ENST00000554131 TPT1P13693 172 aaKnown RBP13.71□□□□□ -0.21
PSEN1-210ENST00000554131 ZNF726P1Q15940 193 aa13.71□□□□□ -0.21
PSEN1-210ENST00000554131 SSX7Q7RTT5 188 aa13.71□□□□□ -0.21
PSEN1-210ENST00000554131 SLC51BQ86UW2 128 aa13.71□□□□□ -0.21
PSEN1-210ENST00000554131 WFDC10AQ9H1F0 79 aa13.71□□□□□ -0.21
PSEN1-210ENST00000554131 BOLA1Q9Y3E2 137 aa13.71□□□□□ -0.21
PSEN1-210ENST00000554131 TRAV8-2A0A0B4J237 113 aa13.7□□□□□ -0.22
PSEN1-210ENST00000554131 PYYP10082 97 aa13.7□□□□□ -0.22
PSEN1-210ENST00000554131 EIF5AP63241 154 aaKnown RBP13.7□□□□□ -0.22
PSEN1-210ENST00000554131 FAM122CQ6P4D5 195 aa13.7□□□□□ -0.22
PSEN1-210ENST00000554131 GTSCR1Q86UQ5 136 aa13.7□□□□□ -0.22
PSEN1-210ENST00000554131 SAT2Q96F10 170 aaPredicted RBP13.7□□□□□ -0.22
PSEN1-210ENST00000554131 HRH4Q9H3N8 390 aa13.7□□□□□ -0.22
PSEN1-210ENST00000554131 MAP6D1Q9H9H5 199 aa13.7□□□□□ -0.22
PSEN1-210ENST00000554131 ZNF586Q9NXT0 402 aa13.7□□□□□ -0.22
PSEN1-210ENST00000554131 SNRPCP09234 159 aaKnown RBP13.69□□□□□ -0.22
PSEN1-210ENST00000554131 ATF4P18848 351 aaPredicted RBP13.69□□□□□ -0.22
PSEN1-210ENST00000554131 DEFA6Q01524 100 aa13.69□□□□□ -0.22
PSEN1-210ENST00000554131 FXYD5Q96DB9 178 aa13.69□□□□□ -0.22
PSEN1-210ENST00000554131 CITED4Q96RK1 184 aa13.69□□□□□ -0.22
PSEN1-210ENST00000554131 UBQLN2Q9UHD9 624 aa13.69□□□□□ -0.22
PSEN1-210ENST00000554131 SLC17A3O00476 420 aa13.68□□□□□ -0.22
PSEN1-210ENST00000554131 CDC34P49427 236 aaPredicted RBP13.68□□□□□ -0.22
PSEN1-210ENST00000554131 MEOX2P50222 304 aa13.68□□□□□ -0.22
PSEN1-210ENST00000554131 TMED6Q8WW62 240 aa13.68□□□□□ -0.22
PSEN1-210ENST00000554131 RAB24Q969Q5 203 aa13.68□□□□□ -0.22
PSEN1-210ENST00000554131 C20orf173Q96LM9 149 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms